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Summary Expression Phenotypes Gene Literature (4) GO Terms (5) Nucleotides (322) Proteins (60) Interactants (427) Wiki
XB-GENEPAGE-951277

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for hccs - All

Models - Gene (32)
Models - mRNA (38)
mRNAs (17)
ESTs (164)

Models - Gene (32)

Source Version Model Species
NCBI 10.0 XBXT10g015405 X. tropicalis
NCBI 10.1 XBXL10_1g21798 X. laevis.S
NCBI 10.1 XBXL10_1g19375 X. laevis.L
ENSEMBL 10.0 hccs X. tropicalis
Xenbase 9.1 gene4096 X. tropicalis
Xenbase 9.2 gene36636 X. laevis.S
Xenbase 9.2 gene4147 X. laevis.L
ENSEMBL 9.1 hccs X. tropicalis
JGI 7.1 Xetro.D01176 X. tropicalis
JGI 7.2 Xelaev16069063m.g X. laevis.S
JGI 7.2 Xelaev16005890m.g X. laevis.L
JGI 6.0 XeXenL6RMv10045715m.g X. laevis.S
JGI 6.0 XeXenL6RMv10021527m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000018924 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_70000008 X. tropicalis
JGI 4.1 e_gw1.70.128.1 X. tropicalis
JGI 4.1 e_gw1.70.129.1 X. tropicalis
JGI 4.1 e_gw1.70.130.1 X. tropicalis
JGI 4.1 gw1.70.128.1 X. tropicalis
JGI 4.1 gw1.70.129.1 X. tropicalis
JGI 4.1 gw1.70.130.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_700005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_700128 X. tropicalis
JGI 4.1 estExt_Genewise1.C_700129 X. tropicalis
JGI 4.1 estExt_Genewise1.C_700130 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_700002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_700008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_700009 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_700003 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_70000001 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_70000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_70000009 X. tropicalis

Models - mRNA (38)

Source Version Model Species
NCBI 10.0 mRNA076237 X. tropicalis
NCBI 10.1 XBmRNA35812 X. laevis.L
NCBI 10.1 XBmRNA40436 X. laevis.S
ENSEMBL 10.0 ENSXETT00000118234 X. tropicalis
ENSEMBL 10.0 ENSXETT00000041049 X. tropicalis
Xenbase 9.1 rna13375 X. tropicalis
Xenbase 9.2 rna12077 X. laevis.L
Xenbase 9.2 rna77046 X. laevis.S
ENSEMBL 9.1 ENSXETT00000041049 X. tropicalis
JGI 7.1 Xetro.D01176.5 X. tropicalis
JGI 7.1 Xetro.D01176.3 X. tropicalis
JGI 7.1 Xetro.D01176.6 X. tropicalis
JGI 7.1 Xetro.D01176.4 X. tropicalis
JGI 7.1 Xetro.D01176.1 X. tropicalis
JGI 7.1 Xetro.D01176.2 X. tropicalis
JGI 7.2 Xelaev16005890m X. laevis.L
JGI 7.2 Xelaev16069063m X. laevis.S
JGI 6.0 XeXenL6RMv10021527m X. laevis.L
JGI 6.0 XeXenL6RMv10045715m X. laevis.S
JGI 4.1 fgenesh1_pg.C_scaffold_70000008 X. tropicalis
ENSEMBL 4.1 ENSXETT00000041049 X. tropicalis
JGI 4.1 e_gw1.70.128.1 X. tropicalis
JGI 4.1 e_gw1.70.129.1 X. tropicalis
JGI 4.1 e_gw1.70.130.1 X. tropicalis
JGI 4.1 gw1.70.128.1 X. tropicalis
JGI 4.1 gw1.70.129.1 X. tropicalis
JGI 4.1 gw1.70.130.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_700005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_700128 X. tropicalis
JGI 4.1 estExt_Genewise1.C_700129 X. tropicalis
JGI 4.1 estExt_Genewise1.C_700130 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_700002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_700008 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_700009 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_700003 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_70000001 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_70000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_70000009 X. tropicalis

mRNAs (17)

Clone Accession Species Library Anatomy Stage
NM_001005708 X. tropicalis
TNeu054p11 CR926219 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6999905 BC075286 X. tropicalis NICHD_XGC_Swb1 whole organism frog
NM_001247978 X. tropicalis
NM_001247977 X. tropicalis
XM_012960825 X. tropicalis
EL797799 X. tropicalis
DT398620 X. tropicalis
CX934649 X. tropicalis
CX505765 X. tropicalis
CR574272 X. tropicalis
CN085891 X. tropicalis
AL850176 X. tropicalis
IMAGE:5515656 BC078076 X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5542214 BC045005 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001087111 X. laevis.L
NM_001093680 X. laevis.S

ESTs (164)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8889130 EL848144 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8889066 EL848043 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8919550 EL833401 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8919441 EL833084 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8917346 EL831092 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8917355 EL830893 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8914477 EL827056 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8853496 EL815051 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8905782 EL797798 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
xtbs26K08 CN085891 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs19K20 CN081384 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7619501 CX346625 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7548858 CX491151 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7545003 CX486631 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7542673 CX449718 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541399 CX447871 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
CAAO3933 CX934649 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7534607 CX428690 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7563239 CX468041 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7567619 CX508126 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7560025 CX515279 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7557030 CX505765 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7803510 DR838111 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7733749 DN017960 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7519944 CX480361 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7524376 CX439345 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA048h21 CR588740 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA040f11 CR574271 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA010m10 CR566990 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA038f06 CR443576 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA044f01 CR426986 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr40I12 CN113990 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas119n01 AL970449 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas125o01 AL961796 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas103l09 AL958378 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas048h17 AL651123 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas013d09 AL632106 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu131i13 AL792732 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu070f23 AL778853 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas057d01 AL682708 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu054p11 AL678840 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu045n19 AL659308 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu031k08 AL655516 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu023g10 AL642049 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu013k15 AL636546 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6999905 CF343238 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:6999905 CF343237 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:6985801 CF152864 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:6983995 CF152208 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
TGas140n18 AL963043 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8889130 EL848145 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8889066 EL848044 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8919550 EL833402 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8919441 EL833085 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8917355 EL830894 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8914477 EL827057 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8905782 EL797799 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
xtbs26K08 CN085890 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs19K20 CN081383 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
CAAO3933 CX934648 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7534607 CX428689 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7733749 DN017959 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7560025 CX515278 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7563239 DR889504 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7567619 CX508125 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7557030 CX505764 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7548858 CX491150 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7519944 CX480360 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7540237 CX461383 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568418 CX456559 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7542673 CX449717 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541399 CX447870 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7524376 CX439344 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA048h21 CR588741 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA040f11 CR574272 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA010m10 CR566991 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA044f01 CR426987 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr40I12 CN113989 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas140n18 BX764637 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas125o01 BX759086 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas103l09 BX754544 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas119n01 BX753005 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas057d01 BX746036 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu131i13 BX697693 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu054p11 BX689345 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu070f23 BX686830 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xl275h17 DC116251 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl266i15 DC113709 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl276h17 DC116547 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl335o09 DC133780 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl265i15 DC113413 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl254c24 DC110022 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl294c13 DC121446 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl311l08 DC126538 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xlk5f24ex DC054338 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk54i04ex DC033891 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8320237 DY547854 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7979948 DR728992 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL488k14ex BP699765 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5