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Summary Expression Phenotypes Gene Literature (4) GO Terms (79) Nucleotides (151) Proteins (85) Interactants (36) Wiki
XB-GENEPAGE-953966

Show:     All X. tropicalis X. laevis

Nucleotide sequences for agrn - All

RefSeq mRNAs(21)
Models - Gene (26)
Models - mRNA (46)
mRNAs (21)
ESTs (27)

RefSeq mRNAs (21)

Accession Version Protein Name Length Protein Species
XM_012967110 XM_012967110.3 agrin isoform X4 11686 bp XP_012822564 X. tropicalis
XM_012967115 XM_012967115.3 agrin isoform X7 12793 bp XP_012822569 X. tropicalis
XM_018096012 XM_018096012.2 agrin isoform X1 11707 bp XP_017951501 X. tropicalis
XM_018096013 XM_018096013.2 agrin isoform X2 11694 bp XP_017951502 X. tropicalis
XM_018096014 XM_018096014.2 agrin isoform X3 11694 bp XP_017951503 X. tropicalis
XM_018096015 XM_018096015.2 agrin isoform X5 11683 bp XP_017951504 X. tropicalis
XM_018096016 XM_018096016.2 agrin isoform X6 11649 bp XP_017951505 X. tropicalis
XM_041569323 XM_041569323.1 XP_041425257.1 agrin isoform X1 6869 bp XP_041425257 X. laevis.L
XM_041569324 XM_041569324.1 XP_041425258.1 agrin isoform X2 6856 bp XP_041425258 X. laevis.L
XM_041569325 XM_041569325.1 XP_041425259.1 agrin isoform X3 6856 bp XP_041425259 X. laevis.L
XM_041569326 XM_041569326.1 XP_041425260.1 agrin isoform X4 6847 bp XP_041425260 X. laevis.L
XM_041569327 XM_041569327.1 XP_041425261.1 agrin isoform X5 6844 bp XP_041425261 X. laevis.L
XM_041569328 XM_041569328.1 XP_041425262.1 agrin isoform X6 6835 bp XP_041425262 X. laevis.L
XM_041569329 XM_041569329.1 XP_041425263.1 agrin isoform X7 6810 bp XP_041425263 X. laevis.L
XM_041569330 XM_041569330.1 XP_041425264.1 agrin isoform X8 7989 bp XP_041425264 X. laevis.L
XM_018227826 XM_018227826.2 agrin isoform X4 7303 bp XP_018083315 X. laevis.S
XM_018227826 agrin isoform X4 7303 bp XP_018083315 X. laevis.S
XM_041571406 XM_041571406.1 XP_041427340.1 agrin isoform X1 7337 bp XP_041427340 X. laevis.S
XM_041571407 XM_041571407.1 XP_041427341.1 agrin isoform X2 7324 bp XP_041427341 X. laevis.S
XM_041571408 XM_041571408.1 XP_041427342.1 agrin isoform X3 7325 bp XP_041427342 X. laevis.S
XM_041571409 XM_041571409.1 XP_041427343.1 agrin isoform X5 8997 bp XP_041427343 X. laevis.S

Models - Gene (26)

Source Version Model Species
NCBI 10.1 XBXL10_1g31202 X. laevis.L
NCBI 10.0 XBXT10g012961 X. tropicalis
NCBI 10.1 XBXL10_1g33395 X. laevis.S
ENSEMBL 10.0 agrn X. tropicalis
Xenbase 9.1 gene21556 X. tropicalis
ENSEMBL 9.1 agrn X. tropicalis
JGI 7.1 Xetro.G01456 X. tropicalis
JGI 6.0 XeXenL6RMv10009852m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000001763 X. tropicalis
JGI 4.1 gw1.207.53.1 X. tropicalis
JGI 4.1 gw1.207.55.1 X. tropicalis
JGI 4.1 gw1.207.63.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_207000032 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2070013 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2070063 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2070095 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_207000012 X. tropicalis
JGI 4.1 gw1.207.95.1 X. tropicalis
JGI 4.1 e_gw1.207.13.1 X. tropicalis
JGI 4.1 e_gw1.207.52.1 X. tropicalis
JGI 4.1 e_gw1.207.53.1 X. tropicalis
JGI 4.1 e_gw1.207.55.1 X. tropicalis
JGI 4.1 e_gw1.207.63.1 X. tropicalis
JGI 4.1 e_gw1.207.95.1 X. tropicalis
JGI 4.1 gw1.207.13.1 X. tropicalis
JGI 4.1 gw1.207.52.1 X. tropicalis

mRNAs based on gene models(46)

Source Version Model Species
NCBI 10.1 XBmRNA63002 X. laevis.S
NCBI 10.1 XBmRNA59018 X. laevis.L
NCBI 10.0 mRNA064144 X. tropicalis
ENSEMBL 10.0 ENSXETT00000092689 X. tropicalis
ENSEMBL 10.0 ENSXETT00000090880 X. tropicalis
ENSEMBL 10.0 ENSXETT00000088083 X. tropicalis
ENSEMBL 10.0 ENSXETT00000082958 X. tropicalis
ENSEMBL 10.0 ENSXETT00000075575 X. tropicalis
ENSEMBL 10.0 ENSXETT00000068931 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074893 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068931 X. tropicalis
ENSEMBL 9.1 ENSXETT00000003664 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092689 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090880 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088083 X. tropicalis
ENSEMBL 9.1 ENSXETT00000082958 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075575 X. tropicalis
Xenbase 9.1 rna44079 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083612 X. tropicalis
JGI 7.1 Xetro.G01456.1 X. tropicalis
JGI 6.0 XeXenL6RMv10009852m X. laevis.L
ENSEMBL 4.1 ENSXETT00000003671 X. tropicalis
ENSEMBL 4.1 ENSXETT00000003668 X. tropicalis
ENSEMBL 4.1 ENSXETT00000003665 X. tropicalis
ENSEMBL 4.1 ENSXETT00000003664 X. tropicalis
ENSEMBL 4.1 ENSXETT00000003672 X. tropicalis
JGI 4.1 gw1.207.95.1 X. tropicalis
JGI 4.1 gw1.207.63.1 X. tropicalis
JGI 4.1 gw1.207.55.1 X. tropicalis
JGI 4.1 gw1.207.53.1 X. tropicalis
JGI 4.1 gw1.207.52.1 X. tropicalis
JGI 4.1 gw1.207.13.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_207000012 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_207000032 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2070095 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2070063 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2070013 X. tropicalis
JGI 4.1 e_gw1.207.95.1 X. tropicalis
JGI 4.1 e_gw1.207.63.1 X. tropicalis
JGI 4.1 e_gw1.207.55.1 X. tropicalis
JGI 4.1 e_gw1.207.53.1 X. tropicalis
JGI 4.1 e_gw1.207.52.1 X. tropicalis
JGI 4.1 e_gw1.207.13.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000003677 X. tropicalis
ENSEMBL 4.1 ENSXETT00000003674 X. tropicalis
ENSEMBL 4.1 ENSXETT00000003673 X. tropicalis

mRNAs from cDNA libraries (21)

Clone Accession Species Library Anatomy Stage
XM_012967110 X. tropicalis
XM_012967115 X. tropicalis
XM_018096012 X. tropicalis
XM_018096013 X. tropicalis
XM_018096014 X. tropicalis
XM_018096015 X. tropicalis
XM_018096016 X. tropicalis
XM_041569323 X. laevis.L
XM_041569324 X. laevis.L
XM_041569325 X. laevis.L
XM_041569326 X. laevis.L
XM_041569327 X. laevis.L
XM_041569328 X. laevis.L
XM_041569329 X. laevis.L
XM_041569330 X. laevis.L
XM_018227826 X. laevis.S
XM_018227826 X. laevis.S
XM_041571406 X. laevis.S
XM_041571407 X. laevis.S
XM_041571408 X. laevis.S
XM_041571409 X. laevis.S

ESTs (27)

Clone Accession 5'/3' Species Library Anatomy Stage
TTpA067p22 BX716182 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7643662 CX799189 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7707065 CX958940 5' X. tropicalis NIH_XGC_tropTe5 testis frog
TGas106h22 AL967978 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA035o20 CR426240 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7643662 CX799188 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
XL026i21 BJ034156 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:8317880 DY560619 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8644717 EB728753 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
PBX0098C02 AW640723 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3517670 BG348079 5' X. laevis.L Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
IMAGp998I178574 BX843473 5' X. laevis.L Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
xl237k19 DC104995 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl277m06 DC116915 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:8541970 EB462259 5' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGE:6874004 CB198993 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
XL065c01 BJ060209 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL089h16 BJ067147 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL089h16 BJ084513 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6874004 CB563628 3' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
rxl237k19 DC070749 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:3517670 BG413856 3' X. laevis.L Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
IMAGE:3515992 BG159832 3' X. laevis.L Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
XL026i21 BJ049558 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
rxl277m06 DC081952 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL065c01 BJ078433 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:8541970 EC277759 3' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62