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Summary Expression Phenotypes Gene Literature (1) GO Terms (26) Nucleotides (205) Proteins (41) Interactants (50) Wiki
XB-GENEPAGE-954770

Show:     All X. tropicalis X. laevis

Nucleotide sequences for rnf13 - All

RefSeq mRNAs(4)
Models - Gene (25)
Models - mRNA (27)
mRNAs (7)
ESTs (92)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001008014 NM_001008014.1 E3 ubiquitin-protein ligase RNF13 precursor 2380 bp NP_001008015 X. tropicalis
XM_012962915 XM_012962915.3 E3 ubiquitin-protein ligase RNF13 isoform X1 2551 bp XP_012818369 X. tropicalis
NM_001090240 NM_001090240.1 ring finger protein 13 precursor 2267 bp NP_001083709 X. laevis.L
XM_018265771 XM_018265771.2 E3 ubiquitin-protein ligase RNF13 2367 bp XP_018121260 X. laevis.S

Models - Gene (25)

Source Version Model Species
NCBI 10.1 XBXL10_1g24096 X. laevis.L
NCBI 10.1 XBXL10_1g25946 X. laevis.S
NCBI 10.0 XBXT10g015620 X. tropicalis
ENSEMBL 10.0 rnf13 X. tropicalis
Xenbase 9.2 gene10267 X. laevis.L
Xenbase 9.2 gene18253 X. laevis.S
JGI 9.1 Xelaev18027714m.g X. laevis.L
JGI 9.1 Xelaev18029806m.g X. laevis.S
Xenbase 9.1 gene7129 X. tropicalis
ENSEMBL 9.1 rnf13 X. tropicalis
JGI 8.0 Xetrov14022087m.g X. tropicalis
JGI 7.2 Xelaev16020706m.g X. laevis.L
JGI 7.1 Xetro.E00332 X. tropicalis
JGI 6.0 XeXenL6RMv10001328m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000020089 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_262000007 X. tropicalis
JGI 4.1 gw1.262.98.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_262000018 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_262000008 X. tropicalis
JGI 4.1 gw1.262.77.1 X. tropicalis
JGI 4.1 e_gw1.262.98.1 X. tropicalis
JGI 4.1 e_gw1.262.96.1 X. tropicalis
JGI 4.1 e_gw1.262.77.1 X. tropicalis
JGI 4.1 gw1.262.96.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_262000019 X. tropicalis

mRNAs based on gene models(27)

Source Version Model Species
NCBI 10.1 XBmRNA45072 X. laevis.L
NCBI 10.1 XBmRNA48530 X. laevis.S
ENSEMBL 10.0 ENSXETT00000043383 X. tropicalis
NCBI 10.0 mRNA077353 X. tropicalis
Xenbase 9.2 rna53314 X. laevis.S
Xenbase 9.2 rna29852 X. laevis.L
JGI 9.1 Xelaev18027714m X. laevis.L
JGI 9.1 Xelaev18029806m X. laevis.S
ENSEMBL 9.1 ENSXETT00000101037 X. tropicalis
ENSEMBL 9.1 ENSXETT00000043383 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090931 X. tropicalis
Xenbase 9.1 rna22998 X. tropicalis
JGI 8.0 Xetrov14022087m X. tropicalis
JGI 7.2 Xelaev16020706m X. laevis.L
JGI 7.1 Xetro.E00332.1 X. tropicalis
JGI 6.0 XeXenL6RMv10001328m X. laevis.L
JGI 4.1 gw1.262.96.1 X. tropicalis
JGI 4.1 e_gw1.262.96.1 X. tropicalis
JGI 4.1 e_gw1.262.98.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000043383 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_262000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_262000018 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_262000019 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_262000008 X. tropicalis
JGI 4.1 gw1.262.77.1 X. tropicalis
JGI 4.1 e_gw1.262.77.1 X. tropicalis
JGI 4.1 gw1.262.98.1 X. tropicalis

mRNAs from cDNA libraries (7)

Clone Accession Species Library Anatomy Stage
IMAGE:6977064 BC080893 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TGas027g02 CT030468 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
NM_001008014 X. tropicalis
XM_012962915 X. tropicalis
IMAGE:4031366 BC063734 X. laevis.L
NM_001090240 X. laevis.L
XM_018265771 X. laevis.S

ESTs (92)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:6977064 CF224051 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
THdA040b16 CR575939 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
st101b06 DC190851 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8949644 EG650580 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
IMAGE:7672431 CX881014 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7613411 CX405924 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7638518 CX384087 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas030i15 AL646949 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas027g02 AL647339 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas045g11 AL650356 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7558674 CX498444 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
XZT34 CX358449 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
st76g09 DC185588 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st78i15 DC186133 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7638518 CX384086 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:6992901 CF241705 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
rst101b06 DC160867 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7558674 CX498443 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
rst76g09 DC155463 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7672431 CX881013 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:6977064 CF224052 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:7613411 DR896075 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
rst78i15 DC156035 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:5382094 BQ393115 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
XL009b04 BJ040916 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL009e04 BJ040978 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL001e17 BJ041225 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL034b22 BJ043198 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:3746798 BF427943 5' X. laevis.L Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:8539172 EB462909 5' X. laevis.L NICHD_XGC_olfb brain unspecified stage
IMAGE:8539781 EB479816 5' X. laevis.L NICHD_XGC_olfb brain unspecified stage
IMAGE:3378166 BE506198 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:5162722 BQ398236 5' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGE:3401538 BE679238 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5156950 CA790561 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5156980 CA790588 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL142a04 BJ093297 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL145j09 BJ094467 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL173e07 BJ097089 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL201o03 BJ622672 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl319c02 DC128705 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL417b18ex BP674560 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL497m01ex BP709406 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk4e24ex DC054014 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk164k17ex DC065587 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL003d04 BJ030117 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL014c18 BJ031652 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL019o11 BJ033143 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL026a07 BJ034030 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL031l08 BJ035033 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL041m07 BJ037853 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL044g08 BJ040083 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:7982019 DR724238 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:8317897 DY574993 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:4959109 BM179679 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4681526 BQ886004 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:6877961 CB180019 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:8543487 EB464583 5' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGE:8738843 EE319493 5' X. laevis.L NICHD_XGC_panc pancreas frog
XL058k19 BJ058229 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL086i16 BJ066561 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL089n22 BJ067219 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL087p16 BJ075267 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL057j09 BJ075457 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL001e17 BJ044696 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
rxlk164k17ex DC032050 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL417b18ex BP712161 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:4959109 BI478133 3' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL058k19 BJ076758 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL086i16 BJ083894 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxl330l02 DC096294 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl319c02 DC092988 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL201o03 BJ639349 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL188h05 BJ635858 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL173e07 BJ100076 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL089n22 BJ084620 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6877961 CB561446 3' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XL087p16 BJ092650 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL142a04 BJ097508 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:5162722 BQ398235 3' X. laevis.L Soares NXEG egg unfertilized egg stage
XL003d04 BJ045145 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL014c18 BJ046689 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL019o11 BJ048449 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL026a07 BJ049406 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL031l08 BJ051410 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL041m07 BJ052522 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL044g08 BJ054470 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL009b04 BJ055286 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL034b22 BJ057132 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:3378166 BE189043 3' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:7982019 DR724295 3' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
XL057j09 BJ092847 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25