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Summary Expression Phenotypes Gene Literature (0) GO Terms (12) Nucleotides (281) Proteins (72) Interactants (25) Wiki
XB-GENEPAGE-955254

Show:     All X. tropicalis X. laevis

Nucleotide sequences for smg7 - All

RefSeq mRNAs(15)
Models - Gene (24)
Models - mRNA (34)
mRNAs (17)
ESTs (94)

RefSeq mRNAs (15)

Accession Version Protein Name Length Protein Species
NM_203927 NM_203927.1 nonsense-mediated mRNA decay factor SMG7 3638 bp NP_989258 X. tropicalis
XM_012960767 XM_012960767.2 protein SMG7 isoform X1 5372 bp XP_012816221 X. tropicalis
XM_012960768 XM_012960768.2 protein SMG7 isoform X2 5369 bp XP_012816222 X. tropicalis
XM_012960769 XM_012960769.2 protein SMG7 isoform X3 5222 bp XP_012816223 X. tropicalis
XM_012960770 XM_012960770.2 protein SMG7 isoform X4 5141 bp XP_012816224 X. tropicalis
NM_001092910 NM_001092910.1 SMG7 nonsense mediated mRNA decay factor L homeolog 5127 bp NP_001086379 X. laevis.L
XM_018256751 XM_018256751.2 SMG7 nonsense mediated mRNA decay factor L homeolog isoform X3 5104 bp XP_018112240 X. laevis.L
XM_018256752 XM_018256752.2 SMG7 nonsense mediated mRNA decay factor L homeolog isoform X4 5023 bp XP_018112241 X. laevis.L
XM_018256753 XM_018256753.2 SMG7 nonsense mediated mRNA decay factor L homeolog isoform X1 5254 bp XP_018112242 X. laevis.L
XM_041589322 XM_041589322.1 XP_041445256.1 SMG7 nonsense mediated mRNA decay factor L homeolog isoform X2 5251 bp XP_041445256 X. laevis.L
XM_018260965 XM_018260965.2 protein SMG7 isoform X1 5265 bp XP_018116454 X. laevis.S
XM_018260966 XM_018260966.2 protein SMG7 isoform X2 5262 bp XP_018116455 X. laevis.S
XM_018260967 XM_018260967.2 protein SMG7 isoform X3 5114 bp XP_018116456 X. laevis.S
XM_018260968 XM_018260968.2 protein SMG7 isoform X4 5111 bp XP_018116457 X. laevis.S
XM_018260969 XM_018260969.2 protein SMG7 isoform X5 5034 bp XP_018116458 X. laevis.S

Models - Gene (24)

Source Version Model Species
NCBI 10.1 XBXL10_1g19336 X. laevis.L
NCBI 10.1 XBXL10_1g21769 X. laevis.S
NCBI 10.0 XBXT10g015562 X. tropicalis
ENSEMBL 10.0 smg7 X. tropicalis
Xenbase 9.2 gene11814 X. laevis.L
Xenbase 9.2 gene14819 X. laevis.S
JGI 9.1 Xelaev18023259m.g X. laevis.L
JGI 9.1 Xelaev18025333m.g X. laevis.S
Xenbase 9.1 gene2788 X. tropicalis
ENSEMBL 9.1 smg7 X. tropicalis
JGI 8.0 Xetrov14019446m.g X. tropicalis
JGI 7.2 Xelaev16061182m.g X. laevis.L
JGI 7.1 Xetro.D02057 X. tropicalis
JGI 6.0 XeXenL6RMv10020575m.g X. laevis.L
JGI 6.0 XeXenL6RMv10014943m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000012528 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_287000017 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_287000007 X. tropicalis
JGI 4.1 gw1.287.93.1 X. tropicalis
JGI 4.1 gw1.287.76.1 X. tropicalis
JGI 4.1 e_gw1.287.75.1 X. tropicalis
JGI 4.1 gw1.287.75.1 X. tropicalis
JGI 4.1 e_gw1.287.93.1 X. tropicalis
JGI 4.1 e_gw1.287.76.1 X. tropicalis

mRNAs based on gene models(34)

Source Version Model Species
NCBI 10.1 XBmRNA40378 X. laevis.S
NCBI 10.1 XBmRNA35739 X. laevis.L
ENSEMBL 10.0 ENSXETT00000072612 X. tropicalis
ENSEMBL 10.0 ENSXETT00000027408 X. tropicalis
ENSEMBL 10.0 ENSXETT00000063669 X. tropicalis
NCBI 10.0 mRNA077053 X. tropicalis
ENSEMBL 10.0 ENSXETT00000083642 X. tropicalis
Xenbase 9.2 rna34304 X. laevis.L
Xenbase 9.2 rna43236 X. laevis.S
Xenbase 9.1 rna9196 X. tropicalis
JGI 9.1 Xelaev18025333m X. laevis.S
JGI 9.1 Xelaev18023259m X. laevis.L
ENSEMBL 9.1 ENSXETT00000092660 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083642 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080807 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072612 X. tropicalis
ENSEMBL 9.1 ENSXETT00000063669 X. tropicalis
ENSEMBL 9.1 ENSXETT00000027408 X. tropicalis
JGI 8.0 Xetrov14019446m X. tropicalis
JGI 7.2 Xelaev16061182m X. laevis.L
JGI 7.1 Xetro.D02057.1 X. tropicalis
JGI 7.1 Xetro.D02057.2 X. tropicalis
JGI 7.1 Xetro.D02057.3 X. tropicalis
JGI 6.0 XeXenL6RMv10014943m X. laevis.L
JGI 6.0 XeXenL6RMv10020575m X. laevis.L
JGI 4.1 gw1.287.76.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_287000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_287000017 X. tropicalis
JGI 4.1 e_gw1.287.93.1 X. tropicalis
JGI 4.1 e_gw1.287.76.1 X. tropicalis
JGI 4.1 e_gw1.287.75.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000027408 X. tropicalis
JGI 4.1 gw1.287.75.1 X. tropicalis
JGI 4.1 gw1.287.93.1 X. tropicalis

mRNAs from cDNA libraries (17)

Clone Accession Species Library Anatomy Stage
IMAGE:5308797 BC063908 X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
NM_203927 X. tropicalis
XM_012960767 X. tropicalis
XM_012960768 X. tropicalis
XM_012960769 X. tropicalis
XM_012960770 X. tropicalis
IMAGE:7009111 BC075200 X. laevis.L
NM_001092910 X. laevis.L
XM_018256751 X. laevis.L
XM_018256752 X. laevis.L
XM_018256753 X. laevis.L
XM_041589322 X. laevis.L
XM_018260965 X. laevis.S
XM_018260966 X. laevis.S
XM_018260967 X. laevis.S
XM_018260968 X. laevis.S
XM_018260969 X. laevis.S

ESTs (94)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7690061 CX913886 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7568997 CX457573 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7689112 CX912887 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7543818 CX459653 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7654213 CX823357 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7652333 CX815074 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7627336 DR900246 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7606648 CX367103 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7585716 CX318576 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7688244 CX910731 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687096 CX908622 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7686981 CX908487 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7686620 CX907937 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:8920410 EL834823 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:5308611 BQ391079 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:8857877 EL821534 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:5308797 BQ391371 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TGas066g19 AL681391 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas123o15 AL957079 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas126h06 AL972305 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:8854990 EL817208 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8854599 EL816356 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8957717 EL658482 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:8935083 EL636498 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:7537675 CX446352 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7690406 CX915015 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7539678 CX452503 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas123o15 BX760185 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:5308611 BQ391078 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:5308797 BQ391370 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TGas066g19 BX746743 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas126h06 BX758420 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7537675 CX446351 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7539678 CX452502 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7568997 CX457572 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7543818 CX459652 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7585716 CX318575 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7652333 CX815073 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7654213 CX823356 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7686620 CX907936 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7686981 CX908486 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687096 CX908621 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688244 CX910730 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7689112 CX912886 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7690061 CX913885 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7690406 CX915014 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:8854599 EL816357 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8854990 EL817209 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8857877 EL821535 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8920410 EL834824 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
3.40-6-h3 BF348708 - X. laevis.L activin-induced ectoderm cDNA library endoderm NF stage 12 to NF stage 13
IMAGE:8317981 DY550321 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:3201550 AW766199 5' X. laevis.L Harland stage 19-23 whole organism NF stage 19 to NF stage 23
IMAGE:3301419 BE132342 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:8544685 EB465963 5' X. laevis.L NICHD_XGC_tail_m tail NF stage 56 to NF stage 62
IMAGE:6933616 CB942125 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
PBX0105C09 AW641337 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:5156163 CA790167 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGp998P1214205 BX854228 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3437626 BG730210 5' X. laevis.L Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:6636886 BU910977 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6634044 BU908558 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL103n04 BJ057921 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6633851 BU908417 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL082a08 BJ065114 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6631949 BU906880 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
XL071d06 BJ074713 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL464b18ex BP691290 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL506m15ex BP702959 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk143p17ex DC049791 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk67h20ex DC056617 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL022c11 BJ033555 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL021c11 BJ035155 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
xl287k07 DC119649 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl260j16 DC111929 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL103n04 BJ075837 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL506m15ex BP735872 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL507m15ex BP736172 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
rxl287k07 DC084888 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk143p17ex DC016489 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxlk67h20ex DC023189 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL001c23 BJ055573 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
rxl260j16 DC077197 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL071d06 BJ081294 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxl254k11 DC075528 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:3743338 BE678835 3' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3743242 BE678398 3' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
XL082a08 BJ087617 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3301419 BE491138 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3201550 AW767979 3' X. laevis.L Harland stage 19-23 whole organism NF stage 19 to NF stage 23
XL022c11 BJ048827 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL097l04 BJ091622 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL021c11 BJ049787 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL464b18ex BP725767 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5