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Summary Expression Phenotypes Gene Literature (0) GO Terms (13) Nucleotides (109) Proteins (39) Interactants (7) Wiki
XB-GENEPAGE-962426

Show:     All X. tropicalis X. laevis

Nucleotide sequences for top1mt - All

RefSeq mRNAs(14)
Models - Gene (16)
Models - mRNA (19)
mRNAs (17)
ESTs (30)

RefSeq mRNAs (14)

Accession Version Protein Name Length Protein Species
XM_004919867 XM_004919867.4 DNA topoisomerase I, mitochondrial isoform X4 2764 bp XP_004919924 X. tropicalis
XM_031903848 XM_031903848.1 XP_031759708.1 DNA topoisomerase I, mitochondrial isoform X1 4452 bp XP_031759708 X. tropicalis
XM_031903849 XM_031903849.1 XP_031759709.1 DNA topoisomerase I, mitochondrial isoform X2 4475 bp XP_031759709 X. tropicalis
XM_031903850 XM_031903850.1 XP_031759710.1 DNA topoisomerase I, mitochondrial isoform X3 4379 bp XP_031759710 X. tropicalis
XM_031903851 XM_031903851.1 XP_031759711.1 DNA topoisomerase I, mitochondrial isoform X3 4364 bp XP_031759711 X. tropicalis
XM_031903852 XM_031903852.1 XP_031759712.1 DNA topoisomerase I, mitochondrial isoform X3 4296 bp XP_031759712 X. tropicalis
XM_018268306 PREDICTED: DNA topoisomerase 1-like isoform X1 4328 bp XP_018123795 X. laevis.L
XM_018268306 PREDICTED: DNA topoisomerase 1-like isoform X1 4328 bp XP_018123795 X. laevis.L
XM_018268307 PREDICTED: DNA topoisomerase 1-like isoform X1 4340 bp XP_018123796 X. laevis.L
XM_018268307 PREDICTED: DNA topoisomerase 1-like isoform X1 4340 bp XP_018123796 X. laevis.L
XM_018268309 PREDICTED: DNA topoisomerase I, mitochondrial-like isoform X2 4272 bp XP_018123798 X. laevis.L
XM_018268309 PREDICTED: DNA topoisomerase I, mitochondrial-like isoform X2 4272 bp XP_018123798 X. laevis.L
XM_018268311 PREDICTED: DNA topoisomerase I, mitochondrial-like isoform X4 2546 bp XP_018123800 X. laevis.L
XM_018268311 PREDICTED: DNA topoisomerase I, mitochondrial-like isoform X4 2546 bp XP_018123800 X. laevis.L

Models - Gene (16)

Source Version Model Species
NCBI 10.0 XBXT10g005008 X. tropicalis
NCBI 10.1 XBXL10_1g28363 X. laevis.L
ENSEMBL 10.0 top1mt X. tropicalis
Xenbase 9.1 gene17149 X. tropicalis
JGI 7.1 Xetro.K02457 X. tropicalis
JGI 4.1 gw1.1272.18.1 X. tropicalis
JGI 4.1 gw1.1272.3.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_12720003 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1272000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1272000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1272000005 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_1272000002 X. tropicalis
JGI 4.1 e_gw1.1272.1.1 X. tropicalis
JGI 4.1 e_gw1.1272.18.1 X. tropicalis
JGI 4.1 e_gw1.1272.3.1 X. tropicalis
JGI 4.1 gw1.1272.1.1 X. tropicalis

mRNAs based on gene models(19)

Source Version Model Species
NCBI 10.1 XBmRNA53290 X. laevis.L
ENSEMBL 10.0 ENSXETT00000042072 X. tropicalis
ENSEMBL 10.0 ENSXETT00000071657 X. tropicalis
NCBI 10.0 mRNA024861 X. tropicalis
ENSEMBL 10.0 ENSXETT00000124357 X. tropicalis
Xenbase 9.1 rna37146 X. tropicalis
JGI 7.1 Xetro.K02457.1 X. tropicalis
JGI 7.1 Xetro.K02457.2 X. tropicalis
JGI 4.1 gw1.1272.1.1 X. tropicalis
JGI 4.1 gw1.1272.18.1 X. tropicalis
JGI 4.1 gw1.1272.3.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1272000005 X. tropicalis
JGI 4.1 e_gw1.1272.18.1 X. tropicalis
JGI 4.1 e_gw1.1272.3.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_12720003 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_1272000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_1272000004 X. tropicalis
JGI 4.1 e_gw1.1272.1.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_1272000002 X. tropicalis

mRNAs from cDNA libraries (17)

Clone Accession Species Library Anatomy Stage
IMAGE:7683037 BC122923 X. tropicalis
TGas096k12 CR848205 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TEgg120g02 CU075579 X. tropicalis
XM_004919867 X. tropicalis
XM_031903848 X. tropicalis
XM_031903849 X. tropicalis
XM_031903850 X. tropicalis
XM_031903851 X. tropicalis
XM_031903852 X. tropicalis
XM_018268306 X. laevis.L
XM_018268306 X. laevis.L
XM_018268307 X. laevis.L
XM_018268307 X. laevis.L
XM_018268309 X. laevis.L
XM_018268309 X. laevis.L
XM_018268311 X. laevis.L
XM_018268311 X. laevis.L

ESTs (30)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas035e23 AL649145 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7559592 CX514930 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA042k08 CR584488 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7574141 CX440360 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas080k12 AL774413 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA030e23 BX742887 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7562865 CX467155 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TGas096k12 AL969649 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7787526 CX330064 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7536275 CX477631 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8932684 EL641062 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:7579007 CX417466 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8929850 EL679510 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8888715 EL847011 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8929850 EL679509 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8888715 EL847012 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TGas080k12 BX752556 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas096k12 BX754588 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7579007 CX417465 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7574141 CX440359 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7562865 CX467154 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7536275 CX477630 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7545949 CX488797 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7559592 CX514929 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
THdA042k08 CR584489 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xthr28O12 CN105891 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA030e23 BX742888 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7787526 CX330063 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8932684 EL641061 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
PBX0024H06 AW634777 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage