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Summary Expression Phenotypes Gene Literature (1) GO Terms (6) Nucleotides (215) Proteins (46) Interactants (107) Wiki
XB-GENEPAGE-966675

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for shmt1 - All

Models - Gene (27)
Models - mRNA (34)
mRNAs (6)
ESTs (91)

Models - Gene (27)

Source Version Model Species
NCBI 10.0 XBXT10g004997 X. tropicalis
NCBI 10.1 XBXL10_1g41424 X. laevis.L
ENSEMBL 10.0 gli2 X. tropicalis
JGI 9.1 Xelaev18045563m.g X. laevis.L
Xenbase 9.1 gene7428 X. tropicalis
Xenbase 9.2 gene6879 X. laevis.L
ENSEMBL 9.1 shmt1 X. tropicalis
JGI 8.0 Xetrov14038860m.g X. tropicalis
JGI 7.1 Xetro.I01571 X. tropicalis
JGI 7.2 Xelaev16071343m.g X. laevis.L
JGI 6.0 XeXenL6RMv10016429m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000005754 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740009 X. tropicalis
JGI 4.1 e_gw1.174.214.1 X. tropicalis
JGI 4.1 e_gw1.174.274.1 X. tropicalis
JGI 4.1 e_gw1.174.9.1 X. tropicalis
JGI 4.1 gw1.174.214.1 X. tropicalis
JGI 4.1 gw1.174.274.1 X. tropicalis
JGI 4.1 gw1.174.9.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1740037 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740214 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740274 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1740045 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1740017 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_174000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_174000046 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_174000018 X. tropicalis

Models - mRNA (34)

Source Version Model Species
NCBI 10.0 mRNA024772 X. tropicalis
NCBI 10.1 XBmRNA78162 X. laevis.L
ENSEMBL 10.0 ENSXETT00000084283 X. tropicalis
ENSEMBL 10.0 ENSXETT00000100736 X. tropicalis
JGI 9.1 Xelaev18045563m X. laevis.L
Xenbase 9.1 rna23965 X. tropicalis
Xenbase 9.2 rna20116 X. laevis.L
ENSEMBL 9.1 ENSXETT00000084283 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100736 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083894 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095821 X. tropicalis
ENSEMBL 9.1 ENSXETT00000067497 X. tropicalis
ENSEMBL 9.1 ENSXETT00000012667 X. tropicalis
JGI 8.0 Xetrov14038860m X. tropicalis
JGI 7.1 Xetro.I01571.1 X. tropicalis
JGI 7.1 Xetro.I01571.2 X. tropicalis
JGI 7.2 Xelaev16071343m X. laevis.L
JGI 6.0 XeXenL6RMv10016429m X. laevis.L
JGI 4.1 estExt_Genewise1.C_1740009 X. tropicalis
ENSEMBL 4.1 ENSXETT00000012667 X. tropicalis
JGI 4.1 e_gw1.174.214.1 X. tropicalis
JGI 4.1 e_gw1.174.274.1 X. tropicalis
JGI 4.1 e_gw1.174.9.1 X. tropicalis
JGI 4.1 gw1.174.214.1 X. tropicalis
JGI 4.1 gw1.174.274.1 X. tropicalis
JGI 4.1 gw1.174.9.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_1740037 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740214 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1740274 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1740045 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1740017 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_174000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_174000046 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_174000018 X. tropicalis

mRNAs (6)

Clone Accession Species Library Anatomy Stage
NM_001015914 X. tropicalis
TGas107h21 CR926419 X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TEgg073c06 CU075561 X. tropicalis
IMAGE:5571917 BC042276 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001086887 X. laevis.L
XM_018234089 X. laevis.L

ESTs (91)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:9017758 EL866131 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9013978 EL860123 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8914855 EL837870 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8870056 EL711011 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8955658 EL662703 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8956109 EL659368 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8967231 EL657399 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:8965224 EL654179 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:8965519 EL654014 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:8938359 EL641136 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8934565 EL635483 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8948565 EG656152 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
IMAGE:8950732 EG652544 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
IMAGE:8945643 EG650983 5' X. tropicalis NICHD_XGC_tropInt_54 intestine frog
IMAGE:7639660 CX385689 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7637939 CX407644 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7632254 CX398022 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7630360 CX370687 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7624046 CX401271 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7610705 CX377237 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7608493 CX409621 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7606909 CX366960 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7847955 DT532229 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
CAAN11305 CX927040 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7735730 DN021990 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7741942 DN033590 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7699278 CX932070 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7693846 CX921659 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688927 CX911885 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7658085 CX836786 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
THdA006i05 CR576573 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA006i01 CR576572 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA023m19 CR435434 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA077k03 CR428168 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7093483 CK655095 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TGas107h21 AL962806 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas039f13 AL653837 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas007d22 AL633504 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas010m01 AL630362 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA030c20 BX743466 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA003k13 BX705807 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas066f23 AL681561 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu037b02 AL658036 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6979063 CF149233 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:9017758 EL866132 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9013978 EL860124 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8914855 EL837871 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8870056 EL711010 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8938359 EL641135 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8934565 EL635482 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:7614800 CX390913 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7847955 DT532228 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
CAAN11305 CX927039 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688927 CX911884 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7632254 DR901387 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7630360 DR900972 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7624046 DR899448 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7610705 DR895479 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7741942 DN033589 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7735730 DN021989 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7639660 CX385688 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7606909 CX366959 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA023m19 CR435435 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA077k03 CR428169 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TGas107h21 BX753870 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas066f23 BX746728 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTpA030c20 BX743467 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA003k13 BX705808 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
xlk136m13ex DC047446 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xlk148a04ex DC051096 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8822738 EG578674 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
IMAGE:8641982 EB732478 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
IMAGE:8321362 DY574091 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:7982717 DR728254 5' X. laevis.L NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
DN828637 DN828637 5' X. laevis.L LiCl-dorsalized gastrula cDNA expression library whole organism NF stage 11
XL467n12ex BP692224 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL426p21ex BP677486 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL208d10 BJ624352 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL143g19 BJ093761 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL003h14 BJ030212 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:5156524 CA793172 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5571917 BQ737094 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3402286 BG037737 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3436481 BF613075 5' X. laevis.L Wellcome CRC pRN3 oocyte oocyte unspecified stage
PBX0092F09 AW640223 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxlk148a04ex DC017759 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:8641982 EB728168 3' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
XL467n12ex BP726573 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL208d10 BJ640905 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL143g19 BJ097861 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL003h14 BJ045225 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15