Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (3) GO Terms (16) Nucleotides (110) Proteins (46) Interactants (215) Wiki
XB-GENEPAGE-967140

Show:     All X. tropicalis X. laevis

Nucleotide sequences for hoxc4 - All

RefSeq mRNAs(8)
Models - Gene (28)
Models - mRNA (30)
mRNAs (8)
ESTs (29)

RefSeq mRNAs (8)

Accession Version Protein Name Length Protein Species
XM_002936638 XM_002936638.5 homeobox protein Hox-C4 2308 bp XP_002936684 X. tropicalis
XM_018247552 XM_018247552.2 homeobox protein Hox-C4 4155 bp XP_018103041 X. laevis.L
XM_041582584 XM_041582584.1 XP_041438518.1 homeobox protein Hox-C4 2421 bp XP_041438518 X. laevis.L
XM_018250129 XM_018250129.2 homeobox protein Hox-C4 2938 bp XP_018105618 X. laevis.S
XM_041584463 XM_041584463.1 XP_041440397.1 homeobox protein Hox-C4 3088 bp XP_041440397 X. laevis.S
XM_041584464 XM_041584464.1 XP_041440398.1 homeobox protein Hox-C4 2486 bp XP_041440398 X. laevis.S
XM_041584466 XM_041584466.1 XP_041440400.1 homeobox protein Hox-C4 2324 bp XP_041440400 X. laevis.S
XM_041584467 XM_041584467.1 XP_041440401.1 homeobox protein Hox-C4 2453 bp XP_041440401 X. laevis.S

Models - Gene (28)

Source Version Model Species
NCBI 10.0 XBXT10g012411 X. tropicalis
NCBI 10.1 XBXL10_1g10836 X. laevis.S
NCBI 10.1 XBXL10_1g8241 X. laevis.L
ENSEMBL 10.0 hoxc4 X. tropicalis
Xenbase 9.1 gene33285 X. tropicalis
ENSEMBL 9.1 ENSXETG00000038997 X. tropicalis
JGI 7.1 Xetro.B01502 X. tropicalis
ENSEMBL 4.1 ENSXETG00000023484 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2260011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260015 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260140 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2260004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2260016 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260085 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2260018 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2260009 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_226000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_226000017 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_226000018 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_226000009 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2260017 X. tropicalis
JGI 4.1 e_gw1.226.140.1 X. tropicalis
JGI 4.1 e_gw1.226.15.1 X. tropicalis
JGI 4.1 e_gw1.226.85.1 X. tropicalis
JGI 4.1 gw1.226.140.1 X. tropicalis
JGI 4.1 gw1.226.15.1 X. tropicalis
JGI 4.1 gw1.226.85.1 X. tropicalis
JGI 4.1 KEN_estExt_Genewise1.C_2260085 X. tropicalis

mRNAs based on gene models(30)

Source Version Model Species
NCBI 10.1 XBmRNA20380 X. laevis.S
NCBI 10.1 XBmRNA15580 X. laevis.L
ENSEMBL 10.0 ENSXETT00000111541 X. tropicalis
ENSEMBL 10.0 ENSXETT00000080023 X. tropicalis
NCBI 10.0 mRNA061485 X. tropicalis
ENSEMBL 10.0 ENSXETT00000106928 X. tropicalis
Xenbase 9.1 rna62830 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080023 X. tropicalis
JGI 7.1 Xetro.B01502.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2260011 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260015 X. tropicalis
JGI 4.1 e_gw1.226.140.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260140 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_226000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_226000017 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_226000018 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_226000009 X. tropicalis
JGI 4.1 gw1.226.140.1 X. tropicalis
JGI 4.1 gw1.226.15.1 X. tropicalis
JGI 4.1 gw1.226.85.1 X. tropicalis
JGI 4.1 KEN_estExt_Genewise1.C_2260085 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2260085 X. tropicalis
JGI 4.1 e_gw1.226.15.1 X. tropicalis
JGI 4.1 e_gw1.226.85.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000050698 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2260004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2260016 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2260017 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2260018 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2260009 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
XM_002936638 X. tropicalis
XM_018247552 X. laevis.L
XM_041582584 X. laevis.L
XM_018250129 X. laevis.S
XM_041584463 X. laevis.S
XM_041584464 X. laevis.S
XM_041584466 X. laevis.S
XM_041584467 X. laevis.S

ESTs (29)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7639217 CX385051 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7627881 CX381532 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7091438 CK653983 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
xtbs35H02 CN091875 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs27N03 CN086775 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs23B02 CN084171 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs22C01 CN082980 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs17B10 CN080268 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7606080 CX413471 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7608346 CX409332 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
rst104k15 DC161682 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7091438 CN325456 3' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:7639217 CX385050 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7608346 CX409331 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7606080 CX413470 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs17B10 CN080267 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs22C01 CN082979 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs23B02 CN084170 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs27N03 CN086774 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs35H02 CN091874 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
XL040k11 BJ037479 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
xlk151g03ex DC052155 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL040k11 BJ052173 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL110b02 BJ090775 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxl291f14 DC085927 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl232c09 DC069199 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl237l02 DC070756 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxlk151g03ex DC018805 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
rxl292f14 DC086187 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15