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Summary Expression Phenotypes Gene Literature (0) GO Terms (36) Nucleotides (136) Proteins (37) Interactants (165) Wiki
XB-GENEPAGE-967536

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ddx41 - All

RefSeq mRNAs(4)
Models - Gene (23)
Models - mRNA (25)
mRNAs (4)
ESTs (59)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
XM_002936940 XM_002936940.5 probable ATP-dependent RNA helicase DDX41 isoform X2 2379 bp XP_002936986 X. tropicalis
XM_012959823 XM_012959823.3 probable ATP-dependent RNA helicase DDX41 isoform X1 2400 bp XP_012815277 X. tropicalis
XM_018252231 XM_018252231.2 probable ATP-dependent RNA helicase DDX41 isoform X1 2652 bp XP_018107720 X. laevis.L
XM_041586227 XM_041586227.1 XP_041442161.1 probable ATP-dependent RNA helicase DDX41 isoform X2 2519 bp XP_041442161 X. laevis.L

Models - Gene (23)

Source Version Model Species
NCBI 10.1 XBXL10_1g12376 X. laevis.L
NCBI 10.0 XBXT10g005843 X. tropicalis
ENSEMBL 10.0 ddx41 X. tropicalis
Xenbase 9.2 gene15478 X. laevis.L
JGI 9.1 Xelaev18017305m.g X. laevis.L
Xenbase 9.1 gene1031 X. tropicalis
ENSEMBL 9.1 mep1a X. tropicalis
JGI 7.1 Xetro.C01466 X. tropicalis
JGI 6.0 XeXenL6RMv10054444m.g X. laevis.L
JGI 4.1 estExt_Genewise1.C_2510091 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2510007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2510021 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_251000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_251000033 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2510032 X. tropicalis
JGI 4.1 e_gw1.251.1.1 X. tropicalis
JGI 4.1 e_gw1.251.21.1 X. tropicalis
JGI 4.1 e_gw1.251.91.1 X. tropicalis
JGI 4.1 gw1.251.21.1 X. tropicalis
JGI 4.1 gw1.251.91.1 X. tropicalis
JGI 4.1 gw1.251.1.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2510019 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2510001 X. tropicalis

mRNAs based on gene models(25)

Source Version Model Species
NCBI 10.1 XBmRNA23120 X. laevis.L
NCBI 10.0 mRNA028915 X. tropicalis
ENSEMBL 10.0 ENSXETT00000015733 X. tropicalis
Xenbase 9.2 rna45184 X. laevis.L
ENSEMBL 9.1 ENSXETT00000104786 X. tropicalis
ENSEMBL 9.1 ENSXETT00000015733 X. tropicalis
ENSEMBL 9.1 ENSXETT00000101373 X. tropicalis
Xenbase 9.1 rna3305 X. tropicalis
JGI 9.1 Xelaev18017305m X. laevis.L
JGI 7.1 Xetro.C01466.1 X. tropicalis
JGI 6.0 XeXenL6RMv10054444m X. laevis.L
JGI 4.1 gw1.251.1.1 X. tropicalis
JGI 4.1 gw1.251.21.1 X. tropicalis
JGI 4.1 gw1.251.91.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2510091 X. tropicalis
JGI 4.1 e_gw1.251.21.1 X. tropicalis
JGI 4.1 e_gw1.251.91.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2510007 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2510032 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2510019 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2510001 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2510021 X. tropicalis
JGI 4.1 e_gw1.251.1.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_251000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_251000033 X. tropicalis

mRNAs from cDNA libraries (4)

Clone Accession Species Library Anatomy Stage
XM_002936940 X. tropicalis
XM_012959823 X. tropicalis
XM_018252231 X. laevis.L
XM_041586227 X. laevis.L

ESTs (59)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8958731 EL654277 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
TGas079m20 AL775086 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas095m20 AL968430 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas098e02 AL971459 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7528141 CX424691 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7576523 CX431715 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7573175 CX436771 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7527678 CX445070 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541039 CX462589 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7549730 CX485529 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7557355 CX505388 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu091d22 AL781343 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu074c16 AL781794 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu094j22 AL786756 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu096e19 AL791370 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu086h07 AL803074 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7517666 CX749350 5' X. tropicalis NIH_XGC_tropNeu5 whole organism NF stage 14 to NF stage 18
IMAGE:6996049 CF238624 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TTpA045g06 BX718535 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7617697 CX362316 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7628171 CX382123 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7616857 CX393525 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7625299 CX402869 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7573175 CX436770 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7557355 CX505387 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7576523 CX431714 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7616857 CX393524 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu074c16 BX688120 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu091d22 BX690220 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas079m20 BX751971 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas095m20 BX754913 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas098e02 BX756161 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu086h07 BX696260 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTpA045g06 BX718536 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7617697 CX362315 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7799767 DN061349 3' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7628171 CX382122 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7549730 CX485528 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7541039 CX462588 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7625299 CX402868 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XL215c11 BJ626519 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl233p10 DC103850 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL421d14ex BP676199 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL481n17ex BP697492 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL483c14ex BP697930 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:8643154 EB727652 5' X. laevis.L NICHD_XGC_skin_m skin unspecified stage
PBX0037H03 AW635758 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:6871137 CA983541 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:5155031 CA792205 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6873391 CB198425 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
XL045n08 BJ038910 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL038e24 BJ039724 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL421d14ex BP713528 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:6873391 CB565324 3' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
rxl233p10 DC069690 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
rxl261k11 DC077499 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL038e24 BJ053285 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL215c11 BJ642896 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
rxlk79e19ex DC027252 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5