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Summary Expression Phenotypes Gene Literature (0) GO Terms (3) Nucleotides (112) Proteins (58) Interactants (4) Wiki
XB-GENEPAGE-969992

Show:     All X. tropicalis X. laevis

Nucleotide sequences for phf21b - All

RefSeq mRNAs(11)
Models - Gene (22)
Models - mRNA (31)
mRNAs (11)
ESTs (34)

RefSeq mRNAs (11)

Accession Version Protein Name Length Protein Species
XM_002942067 PHD finger protein 21B isoform X1 2897 bp XP_002942113 X. tropicalis
XM_031898488 XM_031898488.1 XP_031754348.1 PHD finger protein 21B isoform X2 2894 bp XP_031754348 X. tropicalis
XM_031898489 XM_031898489.1 XP_031754349.1 PHD finger protein 21B isoform X3 3001 bp XP_031754349 X. tropicalis
XM_031898490 XM_031898490.1 XP_031754350.1 PHD finger protein 21B isoform X4 2999 bp XP_031754350 X. tropicalis
XM_041585829 XM_041585829.1 XP_041441763.1 PHD finger protein 21B isoform X1 3274 bp XP_041441763 X. laevis.L
XM_041585830 XM_041585830.1 XP_041441764.1 PHD finger protein 21B isoform X2 3272 bp XP_041441764 X. laevis.L
XM_041585831 XM_041585831.1 XP_041441765.1 PHD finger protein 21B isoform X3 3231 bp XP_041441765 X. laevis.L
XM_041585832 XM_041585832.1 XP_041441766.1 PHD finger protein 21B isoform X4 3228 bp XP_041441766 X. laevis.L
XM_018254749 XM_018254749.2 PHD finger protein 21B isoform X1 4831 bp XP_018110238 X. laevis.S
XM_018254750 XM_018254750.2 PHD finger protein 21B isoform X2 4829 bp XP_018110239 X. laevis.S
XM_018254751 XM_018254751.2 PHD finger protein 21B isoform X3 4676 bp XP_018110240 X. laevis.S

Models - Gene (22)

Source Version Model Species
NCBI 10.1 XBXL10_1g11429 X. laevis.L
NCBI 10.0 XBXT10g009577 X. tropicalis
NCBI 10.1 XBXL10_1g14983 X. laevis.S
ENSEMBL 10.0 phf21b X. tropicalis
Xenbase 9.1 gene31115 X. tropicalis
ENSEMBL 9.1 ENSXETG00000014772 X. tropicalis
ENSEMBL 9.1 phf21b X. tropicalis
JGI 7.1 Xetro.K02786 X. tropicalis
JGI 6.0 XeXenL6RMv10021519m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000003257 X. tropicalis
JGI 4.1 estExt_Genewise1.C_9080009 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_908000010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_9080010 X. tropicalis
JGI 4.1 e_gw1.908.31.1 X. tropicalis
JGI 4.1 e_gw1.908.45.1 X. tropicalis
JGI 4.1 e_gw1.908.9.1 X. tropicalis
JGI 4.1 gw1.908.31.1 X. tropicalis
JGI 4.1 gw1.908.45.1 X. tropicalis
JGI 4.1 gw1.908.9.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_9080010 X. tropicalis
JGI 4.1 estExt_Genewise1.C_9080031 X. tropicalis
JGI 4.1 estExt_Genewise1.C_9080045 X. tropicalis

mRNAs based on gene models(31)

Source Version Model Species
NCBI 10.1 XBmRNA27885 X. laevis.S
NCBI 10.1 XBmRNA21442 X. laevis.L
NCBI 10.0 mRNA047285 X. tropicalis
ENSEMBL 10.0 ENSXETT00000070847 X. tropicalis
ENSEMBL 10.0 ENSXETT00000105554 X. tropicalis
ENSEMBL 10.0 ENSXETT00000107766 X. tropicalis
ENSEMBL 10.0 ENSXETT00000115610 X. tropicalis
ENSEMBL 10.0 ENSXETT00000012358 X. tropicalis
Xenbase 9.1 rna59302 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070847 X. tropicalis
ENSEMBL 9.1 ENSXETT00000061213 X. tropicalis
ENSEMBL 9.1 ENSXETT00000012358 X. tropicalis
JGI 7.1 Xetro.K02786.1 X. tropicalis
JGI 6.0 XeXenL6RMv10021519m X. laevis.L
JGI 4.1 e_gw1.908.31.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000057186 X. tropicalis
ENSEMBL 4.1 ENSXETT00000042380 X. tropicalis
ENSEMBL 4.1 ENSXETT00000012358 X. tropicalis
ENSEMBL 4.1 ENSXETT00000007073 X. tropicalis
ENSEMBL 4.1 ENSXETT00000007072 X. tropicalis
JGI 4.1 estExt_Genewise1.C_9080031 X. tropicalis
JGI 4.1 estExt_Genewise1.C_9080045 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_908000010 X. tropicalis
JGI 4.1 gw1.908.31.1 X. tropicalis
JGI 4.1 gw1.908.45.1 X. tropicalis
JGI 4.1 gw1.908.9.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_9080009 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_9080010 X. tropicalis
JGI 4.1 e_gw1.908.9.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_9080010 X. tropicalis
JGI 4.1 e_gw1.908.45.1 X. tropicalis

mRNAs from cDNA libraries (11)

Clone Accession Species Library Anatomy Stage
XM_002942067 X. tropicalis
XM_031898488 X. tropicalis
XM_031898489 X. tropicalis
XM_031898490 X. tropicalis
XM_041585829 X. laevis.L
XM_041585830 X. laevis.L
XM_041585831 X. laevis.L
XM_041585832 X. laevis.L
XM_018254749 X. laevis.S
XM_018254750 X. laevis.S
XM_018254751 X. laevis.S

ESTs (34)

Clone Accession 5'/3' Species Library Anatomy Stage
st88f11 DC188520 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xtbs28C12 CN087193 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:5307721 BQ389242 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TGas055f03 AL676337 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
st14o11 DC167059 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TNeu122l14 AL797368 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas102a12 AL964961 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TTbA046a01 CR425811 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
st3l20 DC174068 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TTpA042g09 BX741432 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas142m19 AL971671 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7619918 CX347578 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7794478 CX929373 5' X. tropicalis NIH_XGC_tropTe4 testis frog
xthr32M22 CN108704 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTpA042g09 BX741433 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7794478 CX929372 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:5307721 BQ389241 3' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
TGas055f03 BX747053 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas142m19 BX757175 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
rst3l20 DC143773 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst88f11 DC158420 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xthr32M22 CN108703 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
rst14o11 DC136987 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TNeu122l14 BX699791 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7619918 CX347577 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xlk123o03ex DC043262 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
xl269g01 DC114554 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL504g14ex BP702245 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk143i21ex DC049652 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
IMAGE:5513755 CF286775 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL105p06 BJ068169 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxl269g01 DC079681 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL105p06 BJ085454 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
rxlk143i21ex DC016359 3' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5