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Summary Expression Phenotypes Gene Literature (10) GO Terms (32) Nucleotides (240) Proteins (66) Interactants (231) Wiki
XB-GENEPAGE-972726

Show:     All X. tropicalis X. laevis

Nucleotide sequences for cbx5 - All

RefSeq mRNAs(11)
Models - Gene (36)
Models - mRNA (38)
mRNAs (18)
ESTs (119)

RefSeq mRNAs (11)

Accession Version Protein Name Length Protein Species
NM_001244838 NM_001244838.1 chromobox protein homolog 5 isoform 2 1291 bp NP_001231767 X. tropicalis
NM_203576 NM_203576.2 chromobox protein homolog 5 isoform 1 1319 bp NP_988907 X. tropicalis
XM_012956622 XM_012956622.3 chromobox protein homolog 5 isoform X1 2888 bp XP_012812076 X. tropicalis
XM_012956623 XM_012956623.3 chromobox protein homolog 5 isoform X1 2672 bp XP_012812077 X. tropicalis
XM_012956625 XM_012956625.3 chromobox protein homolog 5 isoform X1 2628 bp XP_012812079 X. tropicalis
XM_012956626 XM_012956626.3 chromobox protein homolog 5 isoform X1 1243 bp XP_012812080 X. tropicalis
NM_001087394 NM_001087394.2 chromobox 5 S homeolog 1864 bp NP_001080863 X. laevis.S
XM_018248088 XM_018248088.2 chromobox 5 S homeolog isoform X1 5033 bp XP_018103577 X. laevis.S
XM_018248089 XM_018248089.2 chromobox 5 S homeolog isoform X1 4803 bp XP_018103578 X. laevis.S
XM_018247546 XM_018247546.2 chromobox protein homolog 5 isoform X1 4768 bp XP_018103035 X. laevis.L
XM_018247547 XM_018247547.2 chromobox protein homolog 5 isoform X2 4734 bp XP_018103036 X. laevis.L

Models - Gene (36)

Source Version Model Species
NCBI 10.1 XBXL10_1g8238 X. laevis.L
NCBI 10.1 XBXL10_1g10833 X. laevis.S
NCBI 10.0 XBXT10g018628 X. tropicalis
ENSEMBL 10.0 cbx5 X. tropicalis
Xenbase 9.2 gene14119 X. laevis.L
Xenbase 9.2 gene4940 X. laevis.S
JGI 9.1 Xelaev18013555m.g X. laevis.L
JGI 9.1 Xelaev18016015m.g X. laevis.S
Xenbase 9.1 gene4020 X. tropicalis
ENSEMBL 9.1 cbx5 X. tropicalis
JGI 8.0 Xetrov14010296m.g X. tropicalis
JGI 7.2 Xelaev16063138m.g X. laevis.S
JGI 7.1 Xetro.B01497 X. tropicalis
JGI 6.0 XeXenL6RMv10016784m.g X. laevis.S
JGI 6.0 XeXenL6RMv10010303m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000021279 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_161000010 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1610010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_161000044 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_161000018 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_161000043 X. tropicalis
JGI 4.1 gw1.161.18.1 X. tropicalis
JGI 4.1 gw1.161.87.1 X. tropicalis
JGI 4.1 gw1.161.88.1 X. tropicalis
JGI 4.1 gw1.161.91.1 X. tropicalis
JGI 4.1 e_gw1.161.18.1 X. tropicalis
JGI 4.1 e_gw1.161.87.1 X. tropicalis
JGI 4.1 e_gw1.161.88.1 X. tropicalis
JGI 4.1 e_gw1.161.91.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1610018 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1610087 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1610088 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1610091 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1610041 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1610042 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1610016 X. tropicalis

mRNAs based on gene models(38)

Source Version Model Species
NCBI 10.1 XBmRNA20376 X. laevis.S
NCBI 10.1 XBmRNA15576 X. laevis.L
ENSEMBL 10.0 ENSXETT00000116740 X. tropicalis
NCBI 10.0 mRNA091997 X. tropicalis
ENSEMBL 10.0 ENSXETT00000046025 X. tropicalis
Xenbase 9.2 rna14428 X. laevis.S
Xenbase 9.2 rna41117 X. laevis.L
JGI 9.1 Xelaev18013555m X. laevis.L
Xenbase 9.1 rna13134 X. tropicalis
JGI 9.1 Xelaev18016015m X. laevis.S
ENSEMBL 9.1 ENSXETT00000046025 X. tropicalis
JGI 8.0 Xetrov14010296m X. tropicalis
JGI 7.2 Xelaev16063138m X. laevis.S
JGI 7.1 Xetro.B01497.1 X. tropicalis
JGI 7.1 Xetro.B01497.2 X. tropicalis
JGI 6.0 XeXenL6RMv10010303m X. laevis.S
JGI 6.0 XeXenL6RMv10016784m X. laevis.S
JGI 4.1 gw1.161.18.1 X. tropicalis
JGI 4.1 gw1.161.87.1 X. tropicalis
JGI 4.1 gw1.161.88.1 X. tropicalis
JGI 4.1 gw1.161.91.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_161000018 X. tropicalis
JGI 4.1 e_gw1.161.87.1 X. tropicalis
JGI 4.1 e_gw1.161.88.1 X. tropicalis
JGI 4.1 e_gw1.161.91.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000046025 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_1610010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1610041 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1610042 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_1610016 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1610018 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1610087 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1610088 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1610091 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_161000010 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_161000043 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_161000044 X. tropicalis
JGI 4.1 e_gw1.161.18.1 X. tropicalis

mRNAs from cDNA libraries (18)

Clone Accession Species Library Anatomy Stage
IMAGE:5336204 BC061619 X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6994184 BC084904 X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
CX420483 X. tropicalis
DC182611 X. tropicalis
NM_001244838 X. tropicalis
NM_203576 X. tropicalis
XM_012956622 X. tropicalis
XM_012956623 X. tropicalis
XM_012956625 X. tropicalis
XM_012956626 X. tropicalis
AF009820 X. laevis.S
AY168927 X. laevis.S
IMAGE:6877643 BC054962 X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
NM_001087394 X. laevis.S
XM_018248088 X. laevis.S
XM_018248089 X. laevis.S
XM_018247546 X. laevis.L
XM_018247547 X. laevis.L

ESTs (119)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu077k16 BX683326 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xthr39N08 CN113204 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7520493 CX480508 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xthr39G01 CN112683 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7565636 CX482625 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xthr30L02 CN107853 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7566488 CX506631 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xthr27I06 CN105279 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7560362 CX516271 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu107h23 AL793392 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu069o10 AL779373 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu077k16 AL777885 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu056f11 AL677222 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu010e17 AL637990 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xthr25I21 CN104038 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr14E08 CN098235 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7655829 CX826457 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7646211 CX803702 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
xtbs34E04 CN090945 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7638280 CX408470 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7639033 CX384553 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTpA042e01 BX741408 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA035p13 BX728704 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTbA031d04 CR442679 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA015f16 CR421222 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA028e21 CR419744 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:5336204 BQ521201 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6994184 CF237702 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
TGas025d23 AL627733 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas045i05 AL650364 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas083i12 AL955527 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas130c18 AL959238 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
xthr41M01 CN114485 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas121a19 AL970179 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
st60d19 DC181471 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st63d19 DC182228 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7530963 CX420483 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7561051 CX463892 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st64l17 DC182611 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xtbs34E04 CN090944 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
rst38a21 DC145854 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst60d19 DC151204 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst63d19 DC151972 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst64l17 DC152365 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst65l17 DC152623 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TGas121a19 AL970178 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas130c18 BX760962 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7530963 CX420482 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7561051 CX463891 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7520493 CX480507 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7565636 CX482624 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7566488 CX506630 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7560362 CX516270 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu123i17 BX701244 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:5336204 BQ521200 3' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TTbA028e21 CR419745 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA031d04 CR442680 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA042e01 BX741409 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7638280 CX408469 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7639033 DR903701 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7655829 CX826456 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
xthr14E08 CN098234 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr27I06 CN105278 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr30L02 CN107852 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr39G01 CN112682 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr39N08 CN113203 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr03A14 CN113390 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr41M01 CN114484 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xl319n12 DC128928 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL059i03 BJ058475 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL216m23 BJ627042 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL066h05 BJ060657 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6877643 CB180271 5' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XENOPUS_SOURCE_ID:xlnoc001p20 AW147802 5' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
XL213e15 BJ625982 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL203k12 BJ623173 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL067p24 BJ061110 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL200e06 BJ622236 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL088d20 BJ066795 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL193l14 BJ620578 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL188c19 BJ619135 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL093c16 BJ071132 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL172o13 BJ615636 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL143i22 BJ093800 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
xl224c08 DC100860 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl270l03 DC114932 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl222g14 DC100331 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:3751469 BG345746 5' X. laevis.S Xenopus laevis gastrula non normalized whole organism NF stage 10.5 to NF stage 11.5
IMAGE:3556521 BF612636 5' X. laevis.S Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
XL018m03 BJ036196 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL039b04 BJ036990 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:8321796 DY558598 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGp998M069039 BX851612 5' X. laevis.S Cho Li treated gastrula whole organism NF stage 10 to NF stage 12.5
XENOPUS_SOURCE_ID:xlnga002m08 AW164958 5' X. laevis.S normalized Xenopus laevis gastrula whole organism NF stage 10.5 to NF stage 11.5
IMAGE:4203344 BG554064 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5542089 BQ737124 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:5536504 CF288671 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL039b04 BJ051918 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL066h05 BJ078875 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25