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Summary Expression Phenotypes Gene Literature (4) GO Terms (20) Nucleotides (161) Proteins (48) Interactants (424) Wiki
XB-GENEPAGE-973352

Show:     All X. tropicalis X. laevis

Nucleotide sequences for taf9b - All

RefSeq mRNAs(3)
Models - Gene (35)
Models - mRNA (37)
mRNAs (6)
ESTs (51)

RefSeq mRNAs (3)

Accession Version Protein Name Length Protein Species
XM_002937052 XM_002937052.5 transcription initiation factor TFIID subunit 9 1028 bp XP_002937098 X. tropicalis
NM_001097047 NM_001097047.1 TATA-box binding protein associated factor 9b S homeolog 1015 bp NP_001090516 X. laevis.S
NM_001094491 NM_001094491.1 NP_001087960.1 uncharacterized protein LOC494643 1639 bp NP_001087960 X. laevis.L

Models - Gene (35)

Source Version Model Species
NCBI 10.1 XBXL10_1g35272 X. laevis.L
NCBI 10.1 XBXL10_1g38139 X. laevis.S
NCBI 10.0 XBXT10g014628 X. tropicalis
ENSEMBL 10.0 taf9b X. tropicalis
Xenbase 9.2 gene1602 X. laevis.L
Xenbase 9.2 gene417 X. laevis.S
JGI 9.1 Xelaev18038968m.g X. laevis.L
JGI 9.1 Xelaev18042294m.g X. laevis.S
Xenbase 9.1 gene1463 X. tropicalis
ENSEMBL 9.1 taf9b X. tropicalis
JGI 8.0 Xetrov14033541m.g X. tropicalis
JGI 7.2 Xelaev16007569m.g X. laevis.S
JGI 7.1 Xetro.H00791 X. tropicalis
JGI 6.0 XeXenL6RMv10039325m.g X. laevis.S
JGI 6.0 XeXenL6RMv10037860m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000010138 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2580007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_258000038 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_258000016 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_258000037 X. tropicalis
JGI 4.1 e_gw1.258.3.1 X. tropicalis
JGI 4.1 e_gw1.258.66.1 X. tropicalis
JGI 4.1 e_gw1.258.84.1 X. tropicalis
JGI 4.1 gw1.258.3.1 X. tropicalis
JGI 4.1 gw1.258.66.1 X. tropicalis
JGI 4.1 gw1.258.84.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2580023 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2580003 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2580066 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2580084 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2580037 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2580038 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2580016 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_258000004 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_258000007 X. tropicalis

mRNAs based on gene models(37)

Source Version Model Species
NCBI 10.1 XBmRNA72054 X. laevis.S
NCBI 10.1 XBmRNA66577 X. laevis.L
NCBI 10.0 mRNA072337 X. tropicalis
ENSEMBL 10.0 ENSXETT00000022365 X. tropicalis
Xenbase 9.2 rna4677 X. laevis.L
Xenbase 9.2 rna1204 X. laevis.S
Xenbase 9.1 rna4726 X. tropicalis
JGI 9.1 Xelaev18038968m X. laevis.L
JGI 9.1 Xelaev18042294m X. laevis.S
ENSEMBL 9.1 ENSXETT00000022365 X. tropicalis
JGI 8.0 Xetrov14033541m X. tropicalis
JGI 7.2 Xelaev16007569m X. laevis.S
JGI 7.1 Xetro.H00791.3 X. tropicalis
JGI 7.1 Xetro.H00791.1 X. tropicalis
JGI 7.1 Xetro.H00791.2 X. tropicalis
JGI 6.0 XeXenL6RMv10037860m X. laevis.S
JGI 6.0 XeXenL6RMv10039325m X. laevis.S
JGI 4.1 estExt_Genewise1.C_2580003 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2580023 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2580016 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2580038 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2580037 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2580007 X. tropicalis
JGI 4.1 e_gw1.258.84.1 X. tropicalis
JGI 4.1 e_gw1.258.66.1 X. tropicalis
JGI 4.1 e_gw1.258.3.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000022365 X. tropicalis
JGI 4.1 gw1.258.84.1 X. tropicalis
JGI 4.1 gw1.258.66.1 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_258000004 X. tropicalis
JGI 4.1 gw1.258.3.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_258000016 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_258000038 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_258000037 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_258000007 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2580084 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2580066 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
TNeu075a18 CU075757 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
XM_002937052 X. tropicalis
IMAGE:8330715 BC123359 X. laevis.S
NM_001097047 X. laevis.S
IMAGE:6865804 BC082431 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
NM_001094491 X. laevis.L

ESTs (51)

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu075a18 BX683476 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu075c11 BX683500 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7549296 CX484220 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
st94n19 DC190080 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TGas018o18 AL629517 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7575510 CX430671 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7543261 CX458803 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7552146 CX494763 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu010l02 AL638245 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu045i11 AL659195 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu075a18 AL782296 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu075c11 AL785679 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu085n03 AL786600 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
THdA003c15 CR561213 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7637786 CX408096 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7762301 DR883796 5' X. tropicalis NIH_XGC_tropTe6 testis frog
IMAGE:7845838 DT529027 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8927267 EL674090 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
xthr17G08 CN100193 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr05P20 CN118678 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:8889531 EL848270 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8889343 EL848292 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7762301 DR883795 3' X. tropicalis NIH_XGC_tropTe6 testis frog
xthr17G08 CN100192 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7845838 DT529026 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8889343 EL848293 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TNeu085n03 BX694048 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8927267 EL674089 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:4462082 BG885425 3' X. tropicalis Wellcome CRC pCS107 tropicalis St10-12 whole organism NF stage 10 to NF stage 12
rst94n19 DC160073 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst116f08 DC164872 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
THdA003c15 CR561214 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:8889531 EL848271 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7575510 CX430670 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7543261 CX458802 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
xtbs17P14 CN080416 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7552146 CX494762 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:3745305 BE680249 5' X. laevis.S Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:3745401 BE679803 5' X. laevis.S Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:6872927 CB197998 5' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
xlk161a03ex DC064414 5' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL420i23ex BP675973 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL422l20ex BP676718 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL035d22 BJ042296 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
P103 DV034360 5' X. laevis.S Cornea-lens transdifferentiation library cornea NF stage 50 to NF stage 52
XL035d22 BJ056253 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
rxlk161a03ex DC030888 3' X. laevis.S Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL420i23ex BP713346 3' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:3745305 BE678812 3' X. laevis.S Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:6872927 CB564059 3' X. laevis.S NICHD_XGC_Tad2 whole organism NF stage 62
rxl251l10 DC074695 3' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15