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Summary Expression Phenotypes Gene Literature (13) GO Terms (29) Nucleotides (124) Proteins (56) Interactants (203) Wiki
XB-GENEPAGE-976071

Show:     All X. tropicalis X. laevis

Nucleotide sequences for hira - All

RefSeq mRNAs(6)
Models - Gene (29)
Models - mRNA (36)
mRNAs (11)
ESTs (27)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
XM_002931904 XM_002931904.5 protein HIRA 3931 bp XP_002931950 X. tropicalis
XM_018244118 XM_018244118.2 protein HIRA isoform X1 3981 bp XP_018099607 X. laevis.S
XM_018244119 XM_018244119.2 protein HIRA isoform X2 3786 bp XP_018099608 X. laevis.S
XM_018242445 XM_018242445.2 protein HIRA-like isoform X3 3801 bp XP_018097934 X. laevis.L
XM_041567042 XM_041567042.1 XP_041422976.1 protein HIRA-like isoform X1 3915 bp XP_041422976 X. laevis.L
XM_041567044 XM_041567044.1 XP_041422978.1 protein HIRA-like isoform X2 3906 bp XP_041422978 X. laevis.L

Models - Gene (29)

Source Version Model Species
NCBI 10.1 XBXL10_1g5291 X. laevis.S
NCBI 10.1 XBXL10_1g2721 X. laevis.L
NCBI 10.0 XBXT10g004424 X. tropicalis
ENSEMBL 10.0 hira X. tropicalis
Xenbase 9.2 gene49751 X. laevis.L
Xenbase 9.2 gene18677 X. laevis.S
JGI 9.1 Xelaev18010537m.g X. laevis.S
JGI 9.1 Xelaev18000384m.g X. laevis.L
Xenbase 9.1 gene33493 X. tropicalis
ENSEMBL 9.1 hira X. tropicalis
JGI 8.0 Xetrov14001513m.g X. tropicalis
JGI 7.2 Xelaev16080292m.g X. laevis.S
JGI 7.1 Xetro.A00807 X. tropicalis
JGI 6.0 XeXenL6RMv10022010m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000018598 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_12000022 X. tropicalis
JGI 4.1 e_gw1.12.2.1 X. tropicalis
JGI 4.1 e_gw1.12.209.1 X. tropicalis
JGI 4.1 e_gw1.12.210.1 X. tropicalis
JGI 4.1 gw1.12.2.1 X. tropicalis
JGI 4.1 gw1.12.209.1 X. tropicalis
JGI 4.1 gw1.12.210.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_120037 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120206 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120207 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_120075 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_12000075 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_120022 X. tropicalis

mRNAs based on gene models(36)

Source Version Model Species
NCBI 10.1 XBmRNA4783 X. laevis.L
NCBI 10.1 XBmRNA9839 X. laevis.S
NCBI 10.0 mRNA022067 X. tropicalis
ENSEMBL 10.0 ENSXETT00000067965 X. tropicalis
ENSEMBL 10.0 ENSXETT00000080141 X. tropicalis
Xenbase 9.2 rna54527 X. laevis.S
Xenbase 9.2 rna95864 X. laevis.L
ENSEMBL 9.1 ENSXETT00000084580 X. tropicalis
ENSEMBL 9.1 ENSXETT00000040254 X. tropicalis
Xenbase 9.1 rna63111 X. tropicalis
JGI 9.1 Xelaev18010537m X. laevis.S
ENSEMBL 9.1 ENSXETT00000075044 X. tropicalis
ENSEMBL 9.1 ENSXETT00000079497 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080141 X. tropicalis
ENSEMBL 9.1 ENSXETT00000089203 X. tropicalis
JGI 9.1 Xelaev18000384m X. laevis.L
ENSEMBL 9.1 ENSXETT00000067965 X. tropicalis
JGI 8.0 Xetrov14001513m X. tropicalis
JGI 7.2 Xelaev16080292m X. laevis.S
JGI 7.1 Xetro.A00807.1 X. tropicalis
JGI 6.0 XeXenL6RMv10022010m X. laevis.S
JGI 4.1 estExt_Genewise1.C_120207 X. tropicalis
JGI 4.1 e_gw1.12.2.1 X. tropicalis
JGI 4.1 e_gw1.12.210.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000040254 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_120075 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_120022 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_120037 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120002 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120206 X. tropicalis
JGI 4.1 e_gw1.12.209.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_12000075 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_12000022 X. tropicalis
JGI 4.1 gw1.12.209.1 X. tropicalis
JGI 4.1 gw1.12.2.1 X. tropicalis
JGI 4.1 gw1.12.210.1 X. tropicalis

mRNAs from cDNA libraries (11)

Clone Accession Species Library Anatomy Stage
XM_002931904 X. tropicalis
X7 AJ278386 X. laevis.S
X26 AJ278387 X. laevis.S
EX1-XHIRA AJ278388 X. laevis.S
AJ404369 AJ404369 X. laevis.S
XM_018244118 X. laevis.S
XM_018244119 X. laevis.S
IMAGE:7299597 BC133800 X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
XM_018242445 X. laevis.L
XM_041567042 X. laevis.L
XM_041567044 X. laevis.L

ESTs (27)

Clone Accession 5'/3' Species Library Anatomy Stage
TGas106e23 AL958845 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7621004 DR898469 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8965678 EL654832 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
THdA017g08 CR568683 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7621004 DR898468 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XL186p16 BJ618869 5' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:3472994 BI444677 5' X. laevis.S Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:4959832 BM192436 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
xl308o15 DC125690 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL456l23ex BP688221 5' X. laevis.S Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGp998E019346 BX847661 5' X. laevis.S Wellcome CRC pRN3 St13 17 whole organism NF stage 13 to NF stage 17
XL011g10 BJ029124 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL015o10 BJ032188 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
PBX0140G05 AW644489 5' X. laevis.S Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:8319418 DY572506 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
xl252k04 DC109550 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:3743314 BE679821 5' X. laevis.S Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
XL085g20 BJ066198 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL091h18 BJ070721 5' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:6865284 CA988222 5' X. laevis.S NICHD_XGC_Emb1 whole organism NF stage 10
XL085g20 BJ083520 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3472994 BI449377 3' X. laevis.S Wellcome CRC pRN3 oocyte oocyte unspecified stage
XL186p16 BJ635482 3' X. laevis.S NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:4084584 BI446856 3' X. laevis.S Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
XL015o10 BJ047224 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:4959832 BM192768 3' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3745426 BE678997 3' X. laevis.S Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)