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Summary Expression Phenotypes Gene Literature (3) GO Terms (19) Nucleotides (135) Proteins (52) Interactants (48) Wiki
XB-GENEPAGE-978313

Show:     All X. tropicalis X. laevis

Nucleotide sequences for smyd1 - All

RefSeq mRNAs(4)
Models - Gene (31)
Models - mRNA (38)
mRNAs (6)
ESTs (45)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001126885 NM_001126885.1 histone-lysine N-methyltransferase SMYD1 2758 bp NP_001120357 X. tropicalis
XM_012956146 XM_012956146.3 histone-lysine N-methyltransferase SMYD1 isoform X1 2724 bp XP_012811600 X. tropicalis
NM_001091994 NM_001091994.1 SET and MYND domain containing 1 L homeolog 2500 bp NP_001085463 X. laevis.L
XM_018244992 XM_018244992.2 SET and MYND domain containing 1 L homeolog isoform X1 2530 bp XP_018100481 X. laevis.L

Models - Gene (31)

Source Version Model Species
NCBI 10.1 XBXL10_1g568 X. laevis.L
NCBI 10.0 XBXT10g001366 X. tropicalis
JGI 9.1 Xelaev18008828m.g X. laevis.S
ENSEMBL 10.0 smyd1 X. tropicalis
Xenbase 9.2 gene46570 X. laevis.L
JGI 9.1 Xelaev18004988m.g X. laevis.L
Xenbase 9.1 gene1174 X. tropicalis
ENSEMBL 9.1 smyd1 X. tropicalis
JGI 8.0 Xetrov14043744m.g X. tropicalis
JGI 7.2 Xelaev16045500m.g X. laevis.L
JGI 7.1 Xetro.A03287 X. tropicalis
JGI 6.0 XeXenL6RMv10045986m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000001940 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2800021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2800117 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2800135 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2800136 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2800026 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_280000026 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_280000012 X. tropicalis
JGI 4.1 gw1.280.95.1 X. tropicalis
JGI 4.1 gw1.280.136.1 X. tropicalis
JGI 4.1 gw1.280.135.1 X. tropicalis
JGI 4.1 gw1.280.117.1 X. tropicalis
JGI 4.1 gw1.280.101.1 X. tropicalis
JGI 4.1 e_gw1.280.95.1 X. tropicalis
JGI 4.1 e_gw1.280.136.1 X. tropicalis
JGI 4.1 e_gw1.280.135.1 X. tropicalis
JGI 4.1 e_gw1.280.117.1 X. tropicalis
JGI 4.1 e_gw1.280.101.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2800012 X. tropicalis

mRNAs based on gene models(38)

Source Version Model Species
NCBI 10.1 XBmRNA594 X. laevis.L
ENSEMBL 10.0 ENSXETT00000069766 X. tropicalis
ENSEMBL 10.0 ENSXETT00000004140 X. tropicalis
ENSEMBL 10.0 ENSXETT00000060718 X. tropicalis
NCBI 10.0 mRNA006958 X. tropicalis
Xenbase 9.2 rna91395 X. laevis.L
ENSEMBL 9.1 ENSXETT00000004140 X. tropicalis
ENSEMBL 9.1 ENSXETT00000060718 X. tropicalis
JGI 9.1 Xelaev18008828m X. laevis.S
Xenbase 9.1 rna3761 X. tropicalis
JGI 9.1 Xelaev18004988m X. laevis.L
ENSEMBL 9.1 ENSXETT00000069766 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072637 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083749 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098199 X. tropicalis
JGI 8.0 Xetrov14043744m X. tropicalis
JGI 7.2 Xelaev16045500m X. laevis.L
JGI 7.1 Xetro.A03287.1 X. tropicalis
JGI 6.0 XeXenL6RMv10045986m X. laevis.L
JGI 4.1 estExt_Genewise1.C_2800135 X. tropicalis
JGI 4.1 e_gw1.280.117.1 X. tropicalis
JGI 4.1 e_gw1.280.135.1 X. tropicalis
JGI 4.1 e_gw1.280.136.1 X. tropicalis
JGI 4.1 e_gw1.280.95.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000004140 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2800026 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2800012 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2800021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2800117 X. tropicalis
JGI 4.1 e_gw1.280.101.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2800136 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_280000026 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_280000012 X. tropicalis
JGI 4.1 gw1.280.101.1 X. tropicalis
JGI 4.1 gw1.280.117.1 X. tropicalis
JGI 4.1 gw1.280.135.1 X. tropicalis
JGI 4.1 gw1.280.136.1 X. tropicalis
JGI 4.1 gw1.280.95.1 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
IMAGE:8938913 BC161001 X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
NM_001126885 X. tropicalis
XM_012956146 X. tropicalis
smyd1-802 BC072803 X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
NM_001091994 X. laevis.L
XM_018244992 X. laevis.L

ESTs (45)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7614756 CX390938 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7626819 CX380138 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA070i05 CR440054 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7847172 DT531062 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8867471 EL706469 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8938913 EL642441 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
st33i12 DC172914 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st34i12 DC173186 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7756963 DR874218 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7597301 DR891590 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7584603 CX415059 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7584002 CX414884 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8867471 EL706468 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
rst33i12 DC142654 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst34i12 DC142925 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7614756 CX390937 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7584002 CX414883 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7584603 CX415058 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7597301 DR891589 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7626819 DR899825 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7756963 DR874217 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7847172 DT531061 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
XL062n13 BJ059519 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL036n03 BJ036584 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL102b16 BJ067580 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:4084408 BG892879 5' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
XL109e05 BJ073212 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL057p19 BJ075575 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:8536026 EB470708 5' X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
IMAGE:6931094 CB941174 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:3517645 BG264323 5' X. laevis.L Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
IMAGp998G218379 BX847400 5' X. laevis.L Wellcome CRC pcDNAI egg egg unfertilized egg stage
IMAGE:3199892 AW768031 5' X. laevis.L Harland stage 19-23 whole organism NF stage 19 to NF stage 23
IMAGp998F217822 BX849637 5' X. laevis.L Harland stage 19-23 whole organism NF stage 19 to NF stage 23
smyd1-802 CF290114 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL043d17 BJ038363 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL408n24ex BP733249 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:3402530 BG020330 3' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:3517645 BG414003 3' X. laevis.L Kirschner embryo St10 14 whole organism NF stage 10 to NF stage 14
XL062n13 BJ078026 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL002l04 BJ044981 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL025k08 BJ049297 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL109e05 BJ090551 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL036n03 BJ051797 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL057p19 BJ092963 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25