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Summary Expression Phenotypes Gene Literature (3) GO Terms (19) Nucleotides (135) Proteins (52) Interactants (48) Wiki
XB-GENEPAGE-978313

Show:     All X. tropicalis X. laevis

Nucleotide sequences for smyd1 - Xenopus tropicalis

RefSeq mRNAs(2)
Models - Gene (25)
Models - mRNA (32)
mRNAs (3)
ESTs (22)

RefSeq mRNAs (2)

Accession Version Protein Name Length Protein Species
NM_001126885 NM_001126885.1 histone-lysine N-methyltransferase SMYD1 2758 bp NP_001120357 X. tropicalis
XM_012956146 XM_012956146.3 histone-lysine N-methyltransferase SMYD1 isoform X1 2724 bp XP_012811600 X. tropicalis

Models - Gene (25)

Source Version Model Species
NCBI 10.0 XBXT10g001366 X. tropicalis
ENSEMBL 10.0 smyd1 X. tropicalis
Xenbase 9.1 gene1174 X. tropicalis
ENSEMBL 9.1 smyd1 X. tropicalis
JGI 8.0 Xetrov14043744m.g X. tropicalis
JGI 7.1 Xetro.A03287 X. tropicalis
ENSEMBL 4.1 ENSXETG00000001940 X. tropicalis
JGI 4.1 e_gw1.280.95.1 X. tropicalis
JGI 4.1 gw1.280.101.1 X. tropicalis
JGI 4.1 gw1.280.117.1 X. tropicalis
JGI 4.1 gw1.280.135.1 X. tropicalis
JGI 4.1 gw1.280.136.1 X. tropicalis
JGI 4.1 gw1.280.95.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2800021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2800117 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2800135 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2800136 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2800026 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_280000026 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_280000012 X. tropicalis
JGI 4.1 e_gw1.280.136.1 X. tropicalis
JGI 4.1 e_gw1.280.135.1 X. tropicalis
JGI 4.1 e_gw1.280.117.1 X. tropicalis
JGI 4.1 e_gw1.280.101.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2800012 X. tropicalis

mRNAs based on gene models(32)

Source Version Model Species
ENSEMBL 10.0 ENSXETT00000060718 X. tropicalis
ENSEMBL 10.0 ENSXETT00000004140 X. tropicalis
NCBI 10.0 mRNA006958 X. tropicalis
ENSEMBL 10.0 ENSXETT00000069766 X. tropicalis
ENSEMBL 9.1 ENSXETT00000098199 X. tropicalis
ENSEMBL 9.1 ENSXETT00000060718 X. tropicalis
Xenbase 9.1 rna3761 X. tropicalis
ENSEMBL 9.1 ENSXETT00000004140 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069766 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072637 X. tropicalis
ENSEMBL 9.1 ENSXETT00000083749 X. tropicalis
JGI 8.0 Xetrov14043744m X. tropicalis
JGI 7.1 Xetro.A03287.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_280000012 X. tropicalis
JGI 4.1 gw1.280.101.1 X. tropicalis
JGI 4.1 gw1.280.117.1 X. tropicalis
JGI 4.1 gw1.280.135.1 X. tropicalis
JGI 4.1 gw1.280.136.1 X. tropicalis
JGI 4.1 gw1.280.95.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2800012 X. tropicalis
JGI 4.1 e_gw1.280.117.1 X. tropicalis
JGI 4.1 e_gw1.280.135.1 X. tropicalis
JGI 4.1 e_gw1.280.136.1 X. tropicalis
JGI 4.1 e_gw1.280.95.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000004140 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2800026 X. tropicalis
JGI 4.1 e_gw1.280.101.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2800021 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2800117 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2800135 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2800136 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_280000026 X. tropicalis

mRNAs from cDNA libraries (3)

Clone Accession Species Library Anatomy Stage
IMAGE:8938913 BC161001 X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
NM_001126885 X. tropicalis
XM_012956146 X. tropicalis

ESTs (22)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8938913 EL642441 5' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:8867471 EL706469 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
st33i12 DC172914 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st34i12 DC173186 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TTbA070i05 CR440054 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7626819 CX380138 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7614756 CX390938 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7584002 CX414884 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7584603 CX415059 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7597301 DR891590 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7756963 DR874218 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7847172 DT531062 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
rst33i12 DC142654 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst34i12 DC142925 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7584603 CX415058 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8867471 EL706468 3' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7597301 DR891589 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7847172 DT531061 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7614756 CX390937 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7626819 DR899825 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7584002 CX414883 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7756963 DR874217 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog