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Summary Expression Phenotypes Gene Literature (1) GO Terms (21) Nucleotides (191) Proteins (89) Interactants (32) Wiki
XB-GENEPAGE-980706

Show:     All X. tropicalis X. laevis

Nucleotide sequences for depdc5 - All

RefSeq mRNAs(33)
Models - Gene (23)
Models - mRNA (44)
mRNAs (37)
ESTs (19)

RefSeq mRNAs (33)

Accession Version Protein Name Length Protein Species
XM_002931918 XM_002931918.5 GATOR complex protein DEPDC5 isoform X3 5986 bp XP_002931964 X. tropicalis
XM_004910591 XM_004910591.4 GATOR complex protein DEPDC5 isoform X1 6013 bp XP_004910648 X. tropicalis
XM_031892148 XM_031892148.1 XP_031748008.1 GATOR complex protein DEPDC5 isoform X2 5687 bp XP_031748008 X. tropicalis
XM_031892156 XM_031892156.1 XP_031748016.1 GATOR complex protein DEPDC5 isoform X4 5953 bp XP_031748016 X. tropicalis
XM_031892162 XM_031892162.1 XP_031748022.1 GATOR complex protein DEPDC5 isoform X5 5950 bp XP_031748022 X. tropicalis
XM_031892165 XM_031892165.1 XP_031748025.1 GATOR complex protein DEPDC5 isoform X2 5972 bp XP_031748025 X. tropicalis
XM_031892174 XM_031892174.1 XP_031748034.1 GATOR complex protein DEPDC5 isoform X6 5926 bp XP_031748034 X. tropicalis
XM_031892178 XM_031892178.1 XP_031748038.1 GATOR complex protein DEPDC5 isoform X7 5580 bp XP_031748038 X. tropicalis
XM_031892183 XM_031892183.1 XP_031748043.1 GATOR complex protein DEPDC5 isoform X7 5587 bp XP_031748043 X. tropicalis
XM_031892191 XM_031892191.1 XP_031748051.1 GATOR complex protein DEPDC5 isoform X7 5010 bp XP_031748051 X. tropicalis
XM_031892202 XM_031892202.1 XP_031748062.1 GATOR complex protein DEPDC5 isoform X8 2661 bp XP_031748062 X. tropicalis
XM_018261707 XP_018117196.1 GATOR complex protein DEPDC5 isoform X1 5806 bp XP_018117196 X. laevis.L
XM_018261708 XP_018117197.1 GATOR complex protein DEPDC5 isoform X2 5881 bp XP_018117197 X. laevis.L
XM_018261712 XP_018117201.1 GATOR complex protein DEPDC5 isoform X3 5848 bp XP_018117201 X. laevis.L
XM_018261719 XP_018117208.1 GATOR complex protein DEPDC5 isoform X4 5848 bp XP_018117208 X. laevis.L
XM_018261721 XP_018117210.1 GATOR complex protein DEPDC5 isoform X5 5845 bp XP_018117210 X. laevis.L
XM_018261727 XP_018117216.1 GATOR complex protein DEPDC5 isoform X6 5821 bp XP_018117216 X. laevis.L
XM_018261731 XP_018117220.1 GATOR complex protein DEPDC5 isoform X1 5908 bp XP_018117220 X. laevis.L
XM_018261736 XP_018117225.1 GATOR complex protein DEPDC5 isoform X8 2412 bp XP_018117225 X. laevis.L
XM_018261742 XP_018117231.1 GATOR complex protein DEPDC5 isoform X9 2565 bp XP_018117231 X. laevis.L
XM_041566524 XP_041422458.1 GATOR complex protein DEPDC5 isoform X7 2472 bp XP_041422458 X. laevis.L
XM_018244070 XP_018099559.1 GATOR complex protein DEPDC5 isoform X1 6027 bp XP_018099559 X. laevis.S
XM_018244071 XP_018099560.1 GATOR complex protein DEPDC5 isoform X2 6000 bp XP_018099560 X. laevis.S
XM_018244072 XP_018099561.1 GATOR complex protein DEPDC5 isoform X3 5967 bp XP_018099561 X. laevis.S
XM_018244073 XP_018099562.1 GATOR complex protein DEPDC5 isoform X4 5964 bp XP_018099562 X. laevis.S
XM_018244074 XP_018099563.1 GATOR complex protein DEPDC5 isoform X6 5816 bp XP_018099563 X. laevis.S
XM_018244076 XP_018099565.1 GATOR complex protein DEPDC5 isoform X7 5778 bp XP_018099565 X. laevis.S
XM_018244077 XP_018099566.1 GATOR complex protein DEPDC5 isoform X7 5772 bp XP_018099566 X. laevis.S
XM_018244078 XP_018099567.1 GATOR complex protein DEPDC5 isoform X7 5729 bp XP_018099567 X. laevis.S
XM_018244079 XP_018099568.1 GATOR complex protein DEPDC5 isoform X8 5273 bp XP_018099568 X. laevis.S
XM_041580281 XP_041436215.1 GATOR complex protein DEPDC5 isoform X1 6040 bp XP_041436215 X. laevis.S
XM_041580282 XP_041436216.1 GATOR complex protein DEPDC5 isoform X5 5940 bp XP_041436216 X. laevis.S
XM_041580284 XP_041436218.1 GATOR complex protein DEPDC5 isoform X9 2830 bp XP_041436218 X. laevis.S

Models - Gene (23)

Source Version Model Species
NCBI 10.1 XBXL10_1g2651 X. laevis.L
NCBI 10.1 XBXL10_1g5248 X. laevis.S
NCBI 10.0 XBXT10g010652 X. tropicalis
ENSEMBL 10.0 depdc5 X. tropicalis
JGI 9.1 Xelaev18007587m.g X. laevis.L
JGI 9.1 Xelaev18010484m.g X. laevis.S
Xenbase 9.1 gene17028 X. tropicalis
ENSEMBL 9.1 depdc5 X. tropicalis
JGI 7.1 Xetro.A00882 X. tropicalis
JGI 6.0 XeXenL6RMv10007041m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000004204 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_12000169 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_12000059 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120349 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120348 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120082 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_120102 X. tropicalis
JGI 4.1 e_gw1.12.83.1 X. tropicalis
JGI 4.1 e_gw1.12.352.1 X. tropicalis
JGI 4.1 gw1.12.83.1 X. tropicalis
JGI 4.1 gw1.12.353.1 X. tropicalis
JGI 4.1 e_gw1.12.353.1 X. tropicalis
JGI 4.1 gw1.12.352.1 X. tropicalis

mRNAs based on gene models(44)

Source Version Model Species
NCBI 10.1 XBmRNA4640 X. laevis.L
NCBI 10.1 XBmRNA9748 X. laevis.S
ENSEMBL 10.0 ENSXETT00000009113 X. tropicalis
NCBI 10.0 mRNA052659 X. tropicalis
ENSEMBL 10.0 ENSXETT00000009112 X. tropicalis
ENSEMBL 10.0 ENSXETT00000075499 X. tropicalis
ENSEMBL 10.0 ENSXETT00000085618 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090223 X. tropicalis
ENSEMBL 9.1 ENSXETT00000085618 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075499 X. tropicalis
ENSEMBL 9.1 ENSXETT00000053548 X. tropicalis
ENSEMBL 9.1 ENSXETT00000069298 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072639 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072170 X. tropicalis
JGI 9.1 Xelaev18010484m X. laevis.S
JGI 9.1 Xelaev18007587m X. laevis.L
Xenbase 9.1 rna36957 X. tropicalis
ENSEMBL 9.1 ENSXETT00000009112 X. tropicalis
ENSEMBL 9.1 ENSXETT00000104669 X. tropicalis
ENSEMBL 9.1 ENSXETT00000009113 X. tropicalis
JGI 7.1 Xetro.A00882.1 X. tropicalis
JGI 6.0 XeXenL6RMv10007041m X. laevis.L
ENSEMBL 4.1 ENSXETT00000053546 X. tropicalis
ENSEMBL 4.1 ENSXETT00000053545 X. tropicalis
ENSEMBL 4.1 ENSXETT00000049884 X. tropicalis
ENSEMBL 4.1 ENSXETT00000049257 X. tropicalis
ENSEMBL 4.1 ENSXETT00000009113 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_120102 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120082 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120348 X. tropicalis
JGI 4.1 estExt_Genewise1.C_120349 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_12000169 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_12000059 X. tropicalis
JGI 4.1 gw1.12.352.1 X. tropicalis
JGI 4.1 gw1.12.353.1 X. tropicalis
JGI 4.1 gw1.12.83.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000009112 X. tropicalis
ENSEMBL 4.1 ENSXETT00000009109 X. tropicalis
JGI 4.1 e_gw1.12.352.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000009108 X. tropicalis
ENSEMBL 4.1 ENSXETT00000009107 X. tropicalis
JGI 4.1 e_gw1.12.83.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000053548 X. tropicalis
JGI 4.1 e_gw1.12.353.1 X. tropicalis

mRNAs from cDNA libraries (37)

Clone Accession Species Library Anatomy Stage
XM_002931918 X. tropicalis
XM_004910591 X. tropicalis
XM_031892148 X. tropicalis
XM_031892156 X. tropicalis
XM_031892162 X. tropicalis
XM_031892165 X. tropicalis
XM_031892174 X. tropicalis
XM_031892178 X. tropicalis
XM_031892183 X. tropicalis
XM_031892191 X. tropicalis
XM_031892202 X. tropicalis
XR_004219928 X. tropicalis
XM_018261707 X. laevis.L
XM_018261708 X. laevis.L
XM_018261712 X. laevis.L
XM_018261719 X. laevis.L
XM_018261721 X. laevis.L
XM_018261727 X. laevis.L
XM_018261731 X. laevis.L
XM_018261736 X. laevis.L
XM_018261742 X. laevis.L
XM_041566524 X. laevis.L
XR_005961994 X. laevis.L
XM_018244070 X. laevis.S
XM_018244071 X. laevis.S
XM_018244072 X. laevis.S
XM_018244073 X. laevis.S
XM_018244074 X. laevis.S
XM_018244076 X. laevis.S
XM_018244077 X. laevis.S
XM_018244078 X. laevis.S
XM_018244079 X. laevis.S
XM_041580281 X. laevis.S
XM_041580282 X. laevis.S
XM_041580284 X. laevis.S
XR_001934222 X. laevis.S
XR_005965069 X. laevis.S

ESTs (19)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8957528 EL663538 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:7616234 CX393195 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7608562 CX409716 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7643008 CX797971 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7669612 CX876368 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7694580 CX922844 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7742895 DN035295 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:8853533 EL814761 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8921614 EL836178 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7669612 CX876367 3' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7694580 CX922843 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7608562 DR894770 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7643008 CX797970 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:8921614 EL836179 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8853533 EL814762 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7742895 DN035294 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:3436821 BF614275 5' X. laevis.L Wellcome CRC pRN3 oocyte oocyte unspecified stage
XL016h05 BJ032366 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL094l16 BJ071542 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25