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Summary Expression Phenotypes Gene Literature (0) GO Terms (39) Nucleotides (122) Proteins (45) Interactants (491) Wiki
XB-GENEPAGE-982143

Show:     All X. tropicalis X. laevis

Nucleotide sequences for atxn1 - All

RefSeq mRNAs(20)
Models - Gene (19)
Models - mRNA (19)
mRNAs (22)
ESTs (22)

RefSeq mRNAs (20)

Accession Version Protein Name Length Protein Species
XM_002932692 XM_002932692.5 ataxin-1 14401 bp XP_002932738 X. tropicalis
XM_004915283 XM_004915283.4 ataxin-1 13862 bp XP_004915340 X. tropicalis
XM_012965401 XM_012965401.3 ataxin-1 13100 bp XP_012820855 X. tropicalis
XM_031903742 XM_031903742.1 XP_031759602.1 ataxin-1 14320 bp XP_031759602 X. tropicalis
XM_018267813 XM_018267813.2 ataxin-1 6081 bp XP_018123302 X. laevis.L
XM_018267814 XM_018267814.2 ataxin-1 5267 bp XP_018123303 X. laevis.L
XM_018267816 XM_018267816.2 ataxin-1 5239 bp XP_018123305 X. laevis.L
XM_018267817 XM_018267817.2 ataxin-1 5971 bp XP_018123306 X. laevis.L
XM_018267818 XM_018267818.2 ataxin-1 5996 bp XP_018123307 X. laevis.L
XM_018267819 XM_018267819.2 ataxin-1 5172 bp XP_018123308 X. laevis.L
XM_041566312 XM_041566312.1 XP_041422246.1 ataxin-1 5046 bp XP_041422246 X. laevis.L
XM_018269505 XM_018269505.2 ataxin-1 5346 bp XP_018124994 X. laevis.S
XM_018269506 XM_018269506.2 ataxin-1 6801 bp XP_018124995 X. laevis.S
XM_018269507 XM_018269507.2 ataxin-1 5020 bp XP_018124996 X. laevis.S
XM_018269508 XM_018269508.2 ataxin-1 5242 bp XP_018124997 X. laevis.S
XM_018269509 XM_018269509.2 ataxin-1 5265 bp XP_018124998 X. laevis.S
XM_041567755 XM_041567755.1 XP_041423689.1 ataxin-1 5410 bp XP_041423689 X. laevis.S
XM_041567756 XM_041567756.1 XP_041423690.1 ataxin-1 5082 bp XP_041423690 X. laevis.S
XM_041567757 XM_041567757.1 XP_041423691.1 ataxin-1 4844 bp XP_041423691 X. laevis.S
XM_041567758 XM_041567758.1 XP_041423692.1 ataxin-1 5270 bp XP_041423692 X. laevis.S

Models - Gene (19)

Source Version Model Species
NCBI 10.1 XBXL10_1g27665 X. laevis.L
NCBI 10.1 XBXL10_1g29365 X. laevis.S
NCBI 10.0 XBXT10g007839 X. tropicalis
Xenbase 9.2 gene18823 X. laevis.S
Xenbase 9.2 gene17877 X. laevis.L
JGI 9.1 Xelaev18033487m.g X. laevis.S
JGI 9.1 Xelaev18031701m.g X. laevis.L
Xenbase 9.1 gene28547 X. tropicalis
JGI 7.1 Xetro.F00762 X. tropicalis
JGI 6.0 XeXenL6RMv10010145m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000014184 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_33000097 X. tropicalis
JGI 4.1 gw1.33.9.1 X. tropicalis
JGI 4.1 gw1.33.35.1 X. tropicalis
JGI 4.1 gw1.33.101.1 X. tropicalis
JGI 4.1 e_gw1.33.35.1 X. tropicalis
JGI 4.1 e_gw1.33.101.1 X. tropicalis
JGI 4.1 e_gw1.33.9.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_33000026 X. tropicalis

mRNAs based on gene models(19)

Source Version Model Species
NCBI 10.1 XBmRNA55184 X. laevis.S
NCBI 10.1 XBmRNA51923 X. laevis.L
NCBI 10.0 mRNA038829 X. tropicalis
Xenbase 9.2 rna54938 X. laevis.S
Xenbase 9.2 rna52245 X. laevis.L
Xenbase 9.1 rna55238 X. tropicalis
JGI 9.1 Xelaev18033487m X. laevis.S
JGI 9.1 Xelaev18031701m X. laevis.L
JGI 7.1 Xetro.F00762.1 X. tropicalis
JGI 6.0 XeXenL6RMv10010145m X. laevis.L
JGI 4.1 e_gw1.33.9.1 X. tropicalis
JGI 4.1 e_gw1.33.35.1 X. tropicalis
JGI 4.1 e_gw1.33.101.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000030985 X. tropicalis
JGI 4.1 gw1.33.9.1 X. tropicalis
JGI 4.1 gw1.33.35.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_33000026 X. tropicalis
JGI 4.1 gw1.33.101.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_33000097 X. tropicalis

mRNAs from cDNA libraries (22)

Clone Accession Species Library Anatomy Stage
XM_002932692 X. tropicalis
XM_004915283 X. tropicalis
XM_012965401 X. tropicalis
XM_031903742 X. tropicalis
XM_018267813 X. laevis.L
XM_018267814 X. laevis.L
XM_018267816 X. laevis.L
XM_018267817 X. laevis.L
XM_018267818 X. laevis.L
XM_018267819 X. laevis.L
XM_041566312 X. laevis.L
XM_018269505 X. laevis.S
XM_018269506 X. laevis.S
XM_018269507 X. laevis.S
XM_018269508 X. laevis.S
XM_018269509 X. laevis.S
XM_041567755 X. laevis.S
XM_041567756 X. laevis.S
XM_041567757 X. laevis.S
XM_041567758 X. laevis.S
XR_001936326 X. laevis.S
XR_005962272 X. laevis.S

ESTs (22)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7789128 DR905194 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7091115 CK653882 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TTbA063l22 CR413772 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xtbs06N08 CN092616 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7091115 CN330758 3' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
xtbs06N08 CN092615 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7789128 DR905193 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
PBX0089E01 AW639986 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
XL212n07 BJ625842 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:5162586 BQ398177 5' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGp998D1410647 BX852353 5' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGE:6867914 CA981441 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
XL178e19 BJ616795 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL200l12 BJ622364 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL206i20 BJ623924 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL206i20 BJ640513 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL212n07 BJ642249 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL200l12 BJ639041 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL179e19 BJ633568 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL178e19 BJ633325 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGE:5162586 BQ398176 3' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGE:4783453 BM191910 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage