Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (4) GO Terms (8) Nucleotides (5177) Proteins (52) Interactants (460) Wiki
XB-GENEPAGE-984491

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ccdc50 - All

RefSeq mRNAs(5)
Models - Gene (28)
Models - mRNA (35)
mRNAs (8)
ESTs (4986)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
NM_001174055 NM_001174055.1 coiled-coil domain-containing protein 50 2674 bp NP_001167526 X. tropicalis
XM_031901582 XM_031901582.1 XP_031757442.1 coiled-coil domain-containing protein 50 isoform X1 3036 bp XP_031757442 X. tropicalis
NM_001097927 NM_001097927.1 coiled-coil domain containing 50 L homeolog 1511 bp NP_001091396 X. laevis.L
XM_018242081 XM_018242081.2 coiled-coil domain-containing protein 50 isoform X1 2797 bp XP_018097570 X. laevis.S
XM_018242082 XM_018242082.2 coiled-coil domain-containing protein 50 isoform X2 2296 bp XP_018097571 X. laevis.S

Models - Gene (28)

Source Version Model Species
NCBI 10.1 XBXL10_1g44441 X. laevis.L
NCBI 10.1 XBXL10_1g25753 X. laevis.S
NCBI 10.0 XBXT10g005034 X. tropicalis
NCBI 10.1 XBXL10_1g23899 X. laevis.L
ENSEMBL 10.0 ccdc50 X. tropicalis
Xenbase 9.2 gene13079 X. laevis.S
Xenbase 9.2 gene43416 X. laevis.L
JGI 9.1 Xelaev18027492m.g X. laevis.L
JGI 9.1 Xelaev18004531m.g X. laevis.S
Xenbase 9.1 gene1899 X. tropicalis
ENSEMBL 9.1 ccdc50 X. tropicalis
JGI 8.0 Xetrov14022363m.g X. tropicalis
JGI 7.1 Xetro.E00084 X. tropicalis
JGI 6.0 XeXenL6RMv10038451m.g X. laevis.L
JGI 6.0 XeXenL6RMv10022778m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000002145 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_810012 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_810002 X. tropicalis
JGI 4.1 gw1.81.5.1 X. tropicalis
JGI 4.1 gw1.81.131.1 X. tropicalis
JGI 4.1 gw1.81.106.1 X. tropicalis
JGI 4.1 e_gw1.81.5.1 X. tropicalis
JGI 4.1 e_gw1.81.106.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_81000013 X. tropicalis
JGI 4.1 e_gw1.81.131.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_81000012 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_81000002 X. tropicalis
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_81000001 X. tropicalis

mRNAs based on gene models(35)

Source Version Model Species
NCBI 10.1 XBmRNA44659 X. laevis.L
NCBI 10.1 XBmRNA48141 X. laevis.S
NCBI 10.1 XBmRNA83511 X. laevis.L
NCBI 10.0 mRNA024988 X. tropicalis
ENSEMBL 10.0 ENSXETT00000080989 X. tropicalis
ENSEMBL 10.0 ENSXETT00000102365 X. tropicalis
ENSEMBL 10.0 ENSXETT00000004571 X. tropicalis
Xenbase 9.2 rna38005 X. laevis.S
Xenbase 9.2 rna86800 X. laevis.L
JGI 9.1 Xelaev18027492m X. laevis.L
ENSEMBL 9.1 ENSXETT00000102365 X. tropicalis
ENSEMBL 9.1 ENSXETT00000080989 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088588 X. tropicalis
ENSEMBL 9.1 ENSXETT00000093063 X. tropicalis
Xenbase 9.1 rna6202 X. tropicalis
JGI 9.1 Xelaev18004531m X. laevis.S
ENSEMBL 9.1 ENSXETT00000004571 X. tropicalis
JGI 8.0 Xetrov14022363m X. tropicalis
JGI 7.1 Xetro.E00084.1 X. tropicalis
JGI 7.1 Xetro.E00084.2 X. tropicalis
JGI 6.0 XeXenL6RMv10038451m X. laevis.L
JGI 6.0 XeXenL6RMv10022778m X. laevis.L
JGI 4.1 fgenesh1_Sanger_cdna.C_scaffold_81000001 X. tropicalis
JGI 4.1 e_gw1.81.131.1 X. tropicalis
JGI 4.1 e_gw1.81.5.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000004571 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_810002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_810012 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_81000002 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_81000012 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_81000013 X. tropicalis
JGI 4.1 e_gw1.81.106.1 X. tropicalis
JGI 4.1 gw1.81.106.1 X. tropicalis
JGI 4.1 gw1.81.131.1 X. tropicalis
JGI 4.1 gw1.81.5.1 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
TEgg032i20 CR926326 X. tropicalis
NM_001174055 X. tropicalis
XM_031901582 X. tropicalis
IMAGE:6630609 BC070599 X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
NM_001097927 X. laevis.L
IMAGE:6324316 BC097890 X. laevis.S Wellcome CRC pSK egg egg unfertilized egg stage
XM_018242081 X. laevis.S
XM_018242082 X. laevis.S

ESTs (4986)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
CAAO4498 CX935663 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7629936 CX369587 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
THdA026n23 CR573725 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7576708 CX422308 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
CAAO4498 CX935662 3' X. tropicalis NIH_XGC_tropTe5 testis frog
THdA026n23 CR573726 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
2654 DN154750 - X. laevis.L Xenopus laevis oocyte cDNA subtracted library oocyte unspecified stage
XENOPUS_SOURCE_ID:xlnoc001c03 AW147313 5' X. laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
XENOPUS_SOURCE_ID:xlnoc001l20 AW147513 5' X. laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
XENOPUS_SOURCE_ID:xlnoc003i21 AW200059 5' X. laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
XENOPUS_SOURCE_ID:xlnoc003m08 AW200142 5' X. laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
XENOPUS_SOURCE_ID:xlnoc003n02 AW200159 5' X. laevis.L Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:2942901 AW460371 5' X. laevis.L Xenla 13LiCl whole organism NF stage 13
IMAGE:2942749 AW460340 5' X. laevis.L Xenla 13LiCl whole organism NF stage 13
IMAGE:2942720 AW460326 5' X. laevis.L Xenla 13LiCl whole organism NF stage 13
AW872056 AW872056 5' X. laevis.L Xenla 13 whole organism NF stage 13
XL170o22 BJ615191 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL170a20 BJ614941 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL163i05 BJ613381 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL160a19 BJ612668 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
p5a10 AU244695 5' X. laevis.L Shibata Xenopus AEM lambda-ZAP II cDNA library endomesoderm NF stage 12.5 to NF stage 13
p12e3 AU245177 5' X. laevis.L Shibata Xenopus AEM lambda-ZAP II cDNA library endomesoderm NF stage 12.5 to NF stage 13
W009 CK815998 5' X. laevis.L Cornea-lens transdifferentiation library cornea NF stage 50 to NF stage 52
IMAGE:6939286 CD101083 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:6881162 CB208351 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:3744660 BF426459 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3744670 BF426464 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:6875796 CB200680 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:3744998 BF426532 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:6934994 CB943093 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6935186 CB943559 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6933489 CB944357 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6935954 CD811173 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6933207 CB944415 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6935954 CB984109 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6936500 CD100011 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6933217 CB944410 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6934332 CB941977 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:3744709 BF426633 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3744945 BF426683 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3744790 BF426809 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3744976 BF426849 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3743880 BF426990 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3743901 BF427146 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3744223 BF427215 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3743904 BF427295 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3743960 BF427308 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3744108 BF427339 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
IMAGE:3744212 BF427354 5' X. laevis.L Xenopus laevis unfertilized egg cDNA library egg unfertilized egg stage
AW871983 AW871983 5' X. laevis.L Xenla 13 whole organism NF stage 13
IMAGE:4783036 BM260950 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3379474 BE506358 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3379507 BE506386 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3379526 BE506394 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3379519 BE506401 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3549765 BG578529 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:3550062 BG578938 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:3379554 BE506416 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3379593 BE506455 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3379599 BE506457 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3379638 BE506478 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3548890 BF612109 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:3549136 BF612142 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:3548109 BF613471 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:3548239 BF613486 5' X. laevis.L Wellcome CRC pRN3 St19 26 whole organism NF stage 19 to NF stage 26
IMAGE:3379646 BE506480 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3438569 BG021475 5' X. laevis.L Wellcome CRC pRN3 dorsal lip upper blastopore lip NF stage 10 to NF stage 12.5
IMAGE:3379707 BE506547 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3379768 BE506587 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3474102 BG163057 5' X. laevis.L Wellcome CRC pRN3 dorsal lip upper blastopore lip NF stage 10 to NF stage 12.5
IMAGE:3437981 BF613432 5' X. laevis.L Wellcome CRC pRN3 dorsal lip upper blastopore lip NF stage 10 to NF stage 12.5
IMAGE:3438527 BG021471 5' X. laevis.L Wellcome CRC pRN3 dorsal lip upper blastopore lip NF stage 10 to NF stage 12.5
IMAGE:3379771 BE506595 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3379921 BE506628 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3379946 BE506653 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3379948 BE506654 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3379958 BE506658 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3379981 BE506680 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3379868 BE506725 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:4084788 BG893186 5' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:4084763 BG893002 5' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:3380052 BE506854 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3557426 BG578298 5' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:3556930 BG023208 5' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:3556932 BG023209 5' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:3380056 BE506856 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3557451 BG162485 5' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:3556540 BF612252 5' X. laevis.L Wellcome CRC pRN3 St13 17 egg animal cap whole organism NF stage 13 to NF stage 21
IMAGE:3380057 BE506864 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3380102 BE506890 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3380141 BE506965 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3380159 BE506970 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3380247 BE506992 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3380253 BE506995 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3380192 BE507001 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3380205 BE507011 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3380234 BE507061 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3380294 BE507092 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9
IMAGE:3380293 BE507100 5' X. laevis.L Wellcome CRC pSK animal cap animal cap NF stage 7 to NF stage 9