Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (25) GO Terms (95) Nucleotides (122) Proteins (45) Interactants (327) Wiki
XB-GENEPAGE-985745

Show:     All X. tropicalis X. laevis

Nucleotide sequences for nfkb1 - All

RefSeq mRNAs(5)
Models - Gene (25)
Models - mRNA (30)
mRNAs (6)
ESTs (24)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
XM_002934759 nuclear factor NF-kappa-B p105 subunit isoform X1 3704 bp XP_002934805 X. tropicalis
XM_012955526 XM_012955526.2 nuclear factor NF-kappa-B p105 subunit isoform X2 3551 bp XP_012810980 X. tropicalis
XM_031903127 XM_031903127.1 XP_031758987.1 nuclear factor NF-kappa-B p105 subunit isoform X3 3181 bp XP_031758987 X. tropicalis
NM_001094339 NM_001094339.1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 L homeolog 3627 bp NP_001087808 X. laevis.L
XM_018243391 XM_018243391.2 nuclear factor NF-kappa-B p105 subunit 3548 bp XP_018098880 X. laevis.S

Models - Gene (25)

Source Version Model Species
NCBI 10.1 XBXL10_1g1199 X. laevis.L
NCBI 10.1 XBXL10_1g4096 X. laevis.S
NCBI 10.0 XBXT10g019029 X. tropicalis
ENSEMBL 10.0 nfkb1 X. tropicalis
Xenbase 9.2 gene15351 X. laevis.L
Xenbase 9.2 gene17261 X. laevis.S
JGI 9.1 Xelaev18005721m.g X. laevis.L
JGI 9.1 Xelaev18009414m.g X. laevis.S
Xenbase 9.1 gene7478 X. tropicalis
ENSEMBL 9.1 nfkb1 X. tropicalis
JGI 7.2 Xelaev16070039m.g X. laevis.L
JGI 7.1 Xetro.A02613 X. tropicalis
JGI 6.0 XeXenL6RMv10024666m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000021325 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1110039 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1110170 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1110129 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1110098 X. tropicalis
JGI 4.1 e_gw1.111.98.1 X. tropicalis
JGI 4.1 e_gw1.111.170.1 X. tropicalis
JGI 4.1 e_gw1.111.129.1 X. tropicalis
JGI 4.1 gw1.111.98.1 X. tropicalis
JGI 4.1 gw1.111.170.1 X. tropicalis
JGI 4.1 gw1.111.129.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_111000039 X. tropicalis

mRNAs based on gene models(30)

Source Version Model Species
NCBI 10.1 XBmRNA7545 X. laevis.S
NCBI 10.1 XBmRNA1939 X. laevis.L
ENSEMBL 10.0 ENSXETT00000046127 X. tropicalis
NCBI 10.0 mRNA094096 X. tropicalis
ENSEMBL 10.0 ENSXETT00000072699 X. tropicalis
Xenbase 9.2 rna44798 X. laevis.L
Xenbase 9.2 rna50382 X. laevis.S
Xenbase 9.1 rna24095 X. tropicalis
JGI 9.1 Xelaev18009414m X. laevis.S
JGI 9.1 Xelaev18005721m X. laevis.L
ENSEMBL 9.1 ENSXETT00000101376 X. tropicalis
ENSEMBL 9.1 ENSXETT00000099895 X. tropicalis
ENSEMBL 9.1 ENSXETT00000090551 X. tropicalis
ENSEMBL 9.1 ENSXETT00000072699 X. tropicalis
ENSEMBL 9.1 ENSXETT00000046127 X. tropicalis
JGI 7.2 Xelaev16070039m X. laevis.L
JGI 7.1 Xetro.A02613.1 X. tropicalis
JGI 6.0 XeXenL6RMv10024666m X. laevis.L
JGI 4.1 gw1.111.129.1 X. tropicalis
JGI 4.1 gw1.111.170.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_111000039 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1110170 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1110129 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1110098 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1110039 X. tropicalis
JGI 4.1 e_gw1.111.98.1 X. tropicalis
JGI 4.1 e_gw1.111.129.1 X. tropicalis
JGI 4.1 e_gw1.111.170.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000046127 X. tropicalis
JGI 4.1 gw1.111.98.1 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
XM_002934759 X. tropicalis
XM_012955526 X. tropicalis
XM_031903127 X. tropicalis
IMAGE:7018790 BC081252 X. laevis.L
NM_001094339 X. laevis.L
XM_018243391 X. laevis.S

ESTs (24)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7754261 DN055663 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:8926460 EL673146 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7619566 CX346936 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu058g24 AL677866 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7689276 CX913043 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7695256 CX924319 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7709595 CX964498 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7712628 CX970422 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7717691 CX979300 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7751114 DN050850 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:8926460 EL673145 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:7709595 CX964497 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
TNeu058g24 BX684047 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7754261 DN055662 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7712628 CX970421 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7689276 CX913042 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7751114 DN050849 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7695256 CX924318 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7717691 CX979299 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:8736106 EE328243 5' X. laevis.L NICHD_XGC_panc pancreas frog
IMAGE:3745886 BE680620 5' X. laevis.L Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
IMAGE:6879740 CB207351 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:8736201 EE305712 5' X. laevis.L NICHD_XGC_panc pancreas frog
IMAGE:3745886 BE678135 3' X. laevis.L Xenopus laevis oocyte non normalized oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)