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Summary Expression Phenotypes Gene Literature (2) GO Terms (23) Nucleotides (137) Proteins (46) Interactants (121) Wiki
XB-GENEPAGE-986715

Show:     All X. tropicalis X. laevis

Nucleotide sequences for cbx4 - All

RefSeq mRNAs(5)
Models - Gene (24)
Models - mRNA (28)
mRNAs (12)
ESTs (40)

RefSeq mRNAs (5)

Accession Version Protein Name Length Protein Species
NM_001102857 NM_001102857.1 E3 SUMO-protein ligase CBX4 2481 bp NP_001096327 X. tropicalis
NM_001087480 NM_001087480.1 chromobox 4 S homeolog 2417 bp NP_001080949 X. laevis.S
XM_041577662 XM_041577662.1 XP_041433596.1 chromobox 4 S homeolog isoform X1 2596 bp XP_041433596 X. laevis.S
XM_041577101 XM_041577101.1 XP_041433035.1 E3 SUMO-protein ligase CBX4 isoform X1 3055 bp XP_041433035 X. laevis.L
XM_041577102 XM_041577102.1 XP_041433036.1 E3 SUMO-protein ligase CBX4 isoform X2 2606 bp XP_041433036 X. laevis.L

Models - Gene (24)

Source Version Model Species
NCBI 10.1 XBXL10_1g39686 X. laevis.L
NCBI 10.1 XBXL10_1g42746 X. laevis.S
NCBI 10.0 XBXT10g010059 X. tropicalis
ENSEMBL 10.0 cbx4 X. tropicalis
Xenbase 9.2 gene20528 X. laevis.L
Xenbase 9.2 gene18328 X. laevis.S
Xenbase 9.1 gene4786 X. tropicalis
ENSEMBL 9.1 cbx4 X. tropicalis
JGI 8.0 Xetrov14040560m.g X. tropicalis
JGI 7.1 Xetro.C00885 X. tropicalis
JGI 6.0 XeXenL6RMv10004167m.g X. laevis.S
JGI 6.0 XeXenL6RMv10011705m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000012825 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1480102 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1480014 X. tropicalis
JGI 4.1 e_gw1.148.14.1 X. tropicalis
JGI 4.1 e_gw1.148.105.1 X. tropicalis
JGI 4.1 gw1.148.14.1 X. tropicalis
JGI 4.1 gw1.148.105.1 X. tropicalis
JGI 4.1 gw1.148.102.1 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1480004 X. tropicalis
JGI 4.1 e_gw1.148.102.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_148000004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1480105 X. tropicalis

mRNAs based on gene models(28)

Source Version Model Species
NCBI 10.1 XBmRNA80364 X. laevis.S
NCBI 10.1 XBmRNA74636 X. laevis.L
ENSEMBL 10.0 ENSXETT00000078513 X. tropicalis
ENSEMBL 10.0 ENSXETT00000081625 X. tropicalis
NCBI 10.0 mRNA049730 X. tropicalis
Xenbase 9.2 rna59935 X. laevis.L
Xenbase 9.2 rna53540 X. laevis.S
ENSEMBL 9.1 ENSXETT00000081625 X. tropicalis
Xenbase 9.1 rna15617 X. tropicalis
ENSEMBL 9.1 ENSXETT00000078513 X. tropicalis
JGI 8.0 Xetrov14040560m X. tropicalis
JGI 7.1 Xetro.C00885.3 X. tropicalis
JGI 7.1 Xetro.C00885.1 X. tropicalis
JGI 7.1 Xetro.C00885.2 X. tropicalis
JGI 6.0 XeXenL6RMv10004167m X. laevis.S
JGI 6.0 XeXenL6RMv10011705m X. laevis.S
JGI 4.1 gw1.148.105.1 X. tropicalis
JGI 4.1 e_gw1.148.105.1 X. tropicalis
JGI 4.1 e_gw1.148.14.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000028020 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_1480004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1480014 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1480102 X. tropicalis
JGI 4.1 estExt_Genewise1.C_1480105 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_148000004 X. tropicalis
JGI 4.1 gw1.148.102.1 X. tropicalis
JGI 4.1 e_gw1.148.102.1 X. tropicalis
JGI 4.1 gw1.148.14.1 X. tropicalis

mRNAs from cDNA libraries (12)

Clone Accession Species Library Anatomy Stage
IMAGE:7630808 BC135729 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TEgg076c12 CR760648 X. tropicalis
THdA038p22 CU075495 X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
NM_001102857 X. tropicalis
IMAGE:5073138 BC072759 X. laevis.S
IMAGE:9093669 BC170287 X. laevis.S
IMAGE:9093671 BC170289 X. laevis.S
NM_001087480 X. laevis.S
U39929 X. laevis.S
XM_041577662 X. laevis.S
XM_041577101 X. laevis.L
XM_041577102 X. laevis.L

ESTs (40)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7717085 CX977698 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
THdA052n03 CR589835 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xtbs29M16 CN087996 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
TTpA040l07 BX720032 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7606791 CX366829 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TNeu135c05 AL795304 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7598503 CX388132 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:6985981 CF147760 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7630808 CX396357 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8958590 EL655423 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
IMAGE:7632529 CX398228 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
L1G4b1 AL643817 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7694969 CX923247 5' X. tropicalis NIH_XGC_tropTe4 testis frog
THdA026f23 CR573689 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xtbs35O17 CN091523 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
THdA038p22 CR583562 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA038p22 CR583563 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7694969 CX923246 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7717085 CX977697 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
TTbA050j08 CR443157 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA026f23 CR573690 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xtbs35O17 CN091522 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
THdA052n03 CR589836 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7598503 CX388131 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7630808 CX396356 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7632529 CX398227 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7606791 DR894219 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs29M16 CN087995 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
XL042j20 BJ038151 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6878618 CB180451 5' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XL025b02 BJ033855 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XENOPUS_SOURCE_ID:xlnoc003b05 AW199621 5' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)
XL003o04 BJ030351 5' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL053h02 BJ086564 3' X. laevis.S NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:3437589 BG885980 3' X. laevis.S Wellcome CRC pRN3 oocyte oocyte unspecified stage
XL003o04 BJ045347 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL025b02 BJ049104 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL042j20 BJ052763 3' X. laevis.S NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
IMAGE:6878618 CB560229 3' X. laevis.S NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
XENOPUS_SOURCE_ID:xlnoc003b05 AW198963 3' X. laevis.S Xenopus laevis oocyte oocyte NF stage 5 (16-cell) to NF stage 6 (32-cell)