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Summary Expression Phenotypes Gene Literature (1) GO Terms (2) Nucleotides (393) Proteins (92) Interactants (202) Wiki
XB-GENEPAGE-988693

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for prpf40a - All

Models - Gene (34)
Models - mRNA (50)
mRNAs (32)
ESTs (224)

Models - Gene (34)

Source Version Model Species
NCBI 10.0 XBXT10g001834 X. tropicalis
NCBI 10.1 XBXL10_1g40602 X. laevis.L
NCBI 10.1 XBXL10_1g43433 X. laevis.S
ENSEMBL 10.0 prpf40a X. tropicalis
Xenbase 9.1 gene25005 X. tropicalis
Xenbase 9.2 gene12425 X. laevis.L
Xenbase 9.2 gene1879 X. laevis.S
ENSEMBL 9.1 prpf40a X. tropicalis
JGI 8.0 Xetrov14037042m.g X. tropicalis
JGI 7.1 Xetro.I00226 X. tropicalis
JGI 7.2 Xelaev16028016m.g X. laevis.L
JGI 7.2 Xelaev16053202m.g X. laevis.S
JGI 6.0 XeXenL6RMv10031527m.g X. laevis.L
JGI 6.0 XeXenL6RMv10013405m.g X. laevis.S
JGI 6.0 XeXenL6RMv10042991m.g X. laevis.S
ENSEMBL 4.1 ENSXETG00000021713 X. tropicalis
JGI 4.1 e_gw1.227.28.1 X. tropicalis
JGI 4.1 e_gw1.227.130.1 X. tropicalis
JGI 4.1 e_gw1.227.131.1 X. tropicalis
JGI 4.1 gw1.227.130.1 X. tropicalis
JGI 4.1 gw1.227.131.1 X. tropicalis
JGI 4.1 gw1.227.28.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2270006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2270028 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2270130 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2270131 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2270004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2270009 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2270010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2270002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_227000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_227000009 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_227000010 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_227000002 X. tropicalis

Models - mRNA (50)

Source Version Model Species
NCBI 10.0 mRNA009275 X. tropicalis
NCBI 10.1 XBmRNA76407 X. laevis.L
NCBI 10.1 XBmRNA81689 X. laevis.S
ENSEMBL 10.0 ENSXETT00000075585 X. tropicalis
ENSEMBL 10.0 ENSXETT00000092772 X. tropicalis
ENSEMBL 10.0 ENSXETT00000068156 X. tropicalis
ENSEMBL 10.0 ENSXETT00000100720 X. tropicalis
ENSEMBL 10.0 ENSXETT00000046954 X. tropicalis
Xenbase 9.1 rna49637 X. tropicalis
Xenbase 9.2 rna36122 X. laevis.L
Xenbase 9.2 rna5488 X. laevis.S
ENSEMBL 9.1 ENSXETT00000075585 X. tropicalis
ENSEMBL 9.1 ENSXETT00000046959 X. tropicalis
ENSEMBL 9.1 ENSXETT00000046954 X. tropicalis
ENSEMBL 9.1 ENSXETT00000100720 X. tropicalis
ENSEMBL 9.1 ENSXETT00000062880 X. tropicalis
ENSEMBL 9.1 ENSXETT00000092772 X. tropicalis
ENSEMBL 9.1 ENSXETT00000070300 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068156 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077838 X. tropicalis
JGI 8.0 Xetrov14037042m X. tropicalis
JGI 7.1 Xetro.I00226.2 X. tropicalis
JGI 7.1 Xetro.I00226.3 X. tropicalis
JGI 7.1 Xetro.I00226.4 X. tropicalis
JGI 7.1 Xetro.I00226.1 X. tropicalis
JGI 7.2 Xelaev16028016m X. laevis.L
JGI 7.2 Xelaev16053202m X. laevis.S
JGI 6.0 XeXenL6RMv10013405m X. laevis.S
JGI 6.0 XeXenL6RMv10031527m X. laevis.L
JGI 6.0 XeXenL6RMv10042991m X. laevis.S
JGI 4.1 e_gw1.227.28.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000046954 X. tropicalis
ENSEMBL 4.1 ENSXETT00000046959 X. tropicalis
JGI 4.1 e_gw1.227.130.1 X. tropicalis
JGI 4.1 e_gw1.227.131.1 X. tropicalis
JGI 4.1 gw1.227.130.1 X. tropicalis
JGI 4.1 gw1.227.131.1 X. tropicalis
JGI 4.1 gw1.227.28.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_2270006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2270028 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2270130 X. tropicalis
JGI 4.1 estExt_Genewise1.C_2270131 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2270004 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2270009 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2270010 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_2270002 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_227000004 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_227000009 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_227000010 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_227000002 X. tropicalis

mRNAs (32)

Clone Accession Species Library Anatomy Stage
IMAGE:7864585 BC155432 X. tropicalis
IMAGE:7564990 BC167341 X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
NM_001256941 X. tropicalis
NM_001256940 X. tropicalis
XM_018097051 X. tropicalis
XM_018097050 X. tropicalis
XM_018097049 X. tropicalis
XM_018097048 X. tropicalis
EL838243 X. tropicalis
EL667158 X. tropicalis
DR854637 X. tropicalis
DN097242 X. tropicalis
CX515333 X. tropicalis
CX474725 X. tropicalis
CX442477 X. tropicalis
CX431318 X. tropicalis
CX426510 X. tropicalis
CX418845 X. tropicalis
AL967437 X. tropicalis
AL847021 X. tropicalis
AL803991 X. tropicalis
IMAGE:5073954 BC130103 X. laevis.S
IMAGE:4888679 BC124939 X. laevis.L NICHD_XGC_Emb2 whole organism NF stage 17 to NF stage 19
IMAGE:5073208 BC157397 X. laevis.S
NM_001127820 X. laevis.L
XM_018238784 X. laevis.S
XM_018233944 X. laevis.L
XM_018233942 X. laevis.L
XM_018233941 X. laevis.L
XM_018233940 X. laevis.L
XM_041577113 X. laevis.L
XM_041577112 X. laevis.L

ESTs (224)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8883217 EL838654 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
xtbs15B24 CN078954 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
st71k08 DC184346 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st32a16 DC172540 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAO5552 CX937584 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO5435 CX937371 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7630784 CX396210 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7622862 CX371953 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7577362 CX423507 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7553568 CX492247 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7549082 CX484385 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7547813 CX489561 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7609803 CX376052 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7600156 CX345066 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7540487 CX461461 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7533434 CX427245 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7530644 CX420274 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7575081 CX442477 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7573489 CX436623 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7570770 CX455495 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564990 CX475842 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7557924 CX496904 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7557870 CX496862 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7756351 DR873247 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7744625 DN038184 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7703449 CX939669 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7519525 CX479198 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7533146 CX434481 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7527985 CX424641 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7530454 CX419647 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TTbA026g12 CR419115 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr04B12 CN120487 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr04B12 CN117903 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr43C15 CN115595 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas122p01 AL970746 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas132f02 AL967437 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas141b09 AL966368 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas141d18 AL957954 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas039c10 AL653984 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas018e11 AL633724 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas016g12 AL631897 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu082i21 AL803991 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu140e23 AL803676 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu124l17 AL797147 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu120e02 AL796935 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu115h14 AL794338 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu113c14 AL787636 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu068m04 AL783366 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas066o02 AL682525 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas061a04 AL680366 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu042k11 AL661161 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu029c17 AL646541 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xtbs15B24 CN078953 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
rst71k08 DC154186 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
CAAO5552 CX937583 3' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO5435 CX937370 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7703449 CX939668 3' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7630784 DR901051 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7609803 DR895084 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7756351 DR873246 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:7744625 DN038183 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7553568 CX492246 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7547813 CX489560 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7549082 CX484384 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7519525 CX479197 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7564990 CX475841 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7540487 CX461460 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7570770 CX455494 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7575081 CX442476 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7533146 CX434480 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7533434 CX427244 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7577362 CX423506 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7530644 CX420273 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7600156 CX345065 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA026g12 CR419116 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
xthr04B12 CN117902 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
xthr43C15 CN115594 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TGas141b20 BX764703 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas132f02 BX761178 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas122p01 AL970745 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas061a04 BX747556 3' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TNeu115h14 BX701451 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu113e16 BX701130 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu120e02 BX699880 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu124l17 BX697345 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
xl239h19 DC105559 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl314n20 DC127474 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl316l24 DC128018 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl315n20 DC127750 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl301d11 DC123435 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl319e10 DC128750 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl319m04 DC128903 5' X. laevis.S Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl223k11 DC100705 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl223k18 DC100712 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl222n04 DC100447 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl330f18 DC132154 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl273n15 DC115798 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl326d09 DC130913 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl323e01 DC129978 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15