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Summary Expression Phenotypes Gene Literature (41) GO Terms (61) Nucleotides (105) Proteins (40) Interactants (568) Wiki
XB-GENEPAGE-989334

Show:     All X. tropicalis X. laevis

Nucleotide sequences for ntn1 - All

RefSeq mRNAs(11)
Models - Gene (19)
Models - mRNA (21)
mRNAs (13)
ESTs (26)

RefSeq mRNAs (11)

Accession Version Protein Name Length Protein Species
NM_001078917 NM_001078917.1 netrin-5 precursor 2527 bp NP_001072385 X. tropicalis
XM_018235470 XM_018235470.2 netrin-1 5504 bp XP_018090959 X. laevis.L
XM_018235471 XM_018235471.2 netrin-1 5260 bp XP_018090960 X. laevis.L
XM_041577506 XM_041577506.1 XP_041433440.1 netrin-1 5665 bp XP_041433440 X. laevis.L
XM_041577507 XM_041577507.1 XP_041433441.1 netrin-1 5049 bp XP_041433441 X. laevis.L
XM_018238580 XM_018238580.2 netrin-1 6224 bp XP_018094069 X. laevis.S
XM_018238581 XM_018238581.2 netrin-1 6174 bp XP_018094070 X. laevis.S
XM_018238582 XM_018238582.2 netrin-1 6424 bp XP_018094071 X. laevis.S
XM_018238583 XM_018238583.2 netrin-1 6437 bp XP_018094072 X. laevis.S
XM_018238584 XM_018238584.2 netrin-1 6190 bp XP_018094073 X. laevis.S
XM_041577968 XM_041577968.1 XP_041433902.1 netrin-1 6033 bp XP_041433902 X. laevis.S

Models - Gene (19)

Source Version Model Species
NCBI 10.1 XBXL10_1g43178 X. laevis.S
NCBI 10.1 XBXL10_1g40205 X. laevis.L
NCBI 10.0 XBXT10g019650 X. tropicalis
ENSEMBL 10.0 ntn1 X. tropicalis
Xenbase 9.2 gene10795 X. laevis.S
Xenbase 9.2 gene38144 X. laevis.L
Xenbase 9.1 gene33486 X. tropicalis
ENSEMBL 9.1 ntn1 X. tropicalis
JGI 7.2 Xelaev16074931m.g X. laevis.L
JGI 6.0 XeXenL6RMv10043743m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000019519 X. tropicalis
JGI 4.1 gw1.255.128.1 X. tropicalis
JGI 4.1 e_gw1.255.335.1 X. tropicalis
JGI 4.1 e_gw1.255.128.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_255000042 X. tropicalis
JGI 4.1 e_gw1.255.286.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_255000013 X. tropicalis
JGI 4.1 gw1.255.335.1 X. tropicalis
JGI 4.1 gw1.255.286.1 X. tropicalis

mRNAs based on gene models(21)

Source Version Model Species
NCBI 10.1 XBmRNA81168 X. laevis.S
NCBI 10.1 XBmRNA75646 X. laevis.L
NCBI 10.0 mRNA096980 X. tropicalis
ENSEMBL 10.0 ENSXETT00000061714 X. tropicalis
ENSEMBL 10.0 ENSXETT00000112770 X. tropicalis
ENSEMBL 10.0 ENSXETT00000118114 X. tropicalis
Xenbase 9.2 rna79191 X. laevis.L
Xenbase 9.2 rna31377 X. laevis.S
Xenbase 9.1 rna63100 X. tropicalis
ENSEMBL 9.1 ENSXETT00000061714 X. tropicalis
JGI 7.2 Xelaev16074931m X. laevis.L
JGI 6.0 XeXenL6RMv10043743m X. laevis.L
ENSEMBL 4.1 ENSXETT00000042263 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_255000042 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_255000013 X. tropicalis
JGI 4.1 gw1.255.128.1 X. tropicalis
JGI 4.1 gw1.255.286.1 X. tropicalis
JGI 4.1 gw1.255.335.1 X. tropicalis
JGI 4.1 e_gw1.255.286.1 X. tropicalis
JGI 4.1 e_gw1.255.335.1 X. tropicalis
JGI 4.1 e_gw1.255.128.1 X. tropicalis

mRNAs from cDNA libraries (13)

Clone Accession Species Library Anatomy Stage
IMAGE:7717948 BC121568 X. tropicalis NIH_XGC_tropInt1 intestine frog
NM_001078917 X. tropicalis
XM_018235470 X. laevis.L
XM_018235471 X. laevis.L
XM_041577506 X. laevis.L
XM_041577507 X. laevis.L
AF033341 X. laevis.S
XM_018238580 X. laevis.S
XM_018238581 X. laevis.S
XM_018238582 X. laevis.S
XM_018238583 X. laevis.S
XM_018238584 X. laevis.S
XM_041577968 X. laevis.S

ESTs (26)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8960822 EL652454 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
TNeu143c08 AL798349 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TTbA053e23 CR420198 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
XZT12641 CX321121 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7595132 DR890935 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7627402 DR900309 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:6983405 CF150977 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7641976 CX796426 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7712700 CX970594 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7717074 CX978291 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7717948 CX980104 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:8953635 EG651665 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8887510 EL845707 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
st105i23 DC191875 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
rst105i23 DC161899 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7627402 CX381292 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7641976 CX796425 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7717948 CX980103 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
TTbA053e23 CR420199 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:7712700 CX970593 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7595132 CX335229 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xl231g13 DC103100 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl306c02 DC124909 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL424j23ex BP677023 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
xlk161h18ex DC064571 5' X. laevis.L Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library endomesoderm NF stage 12.5
XL495g10ex BP740610 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5