Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (4) GO Terms (34) Nucleotides (412) Proteins (53) Interactants (157) Wiki
XB-GENEPAGE-989761

Show:     All X. tropicalis X. laevis

Nucleotide sequences for copa - All

RefSeq mRNAs(6)
Models - Gene (25)
Models - mRNA (35)
mRNAs (8)
ESTs (282)

RefSeq mRNAs (6)

Accession Version Protein Name Length Protein Species
NM_001127994 NM_001127994.1 coatomer subunit alpha 3948 bp NP_001121466 X. tropicalis
NM_001093019 NM_001093019.2 COPI coat complex subunit alpha L homeolog 3933 bp NP_001086488 X. laevis.L
XM_018228961 XM_018228961.2 COPI coat complex subunit alpha L homeolog isoform X1 4009 bp XP_018084450 X. laevis.L
XM_018233501 XM_018233501.2 coatomer subunit alpha isoform X2 3974 bp XP_018088990 X. laevis.S
XM_041574501 XM_041574501.1 XP_041430435.1 coatomer subunit alpha isoform X1 3992 bp XP_041430435 X. laevis.S
XM_041574502 XM_041574502.1 XP_041430436.1 coatomer subunit alpha isoform X3 3911 bp XP_041430436 X. laevis.S

Models - Gene (25)

Source Version Model Species
NCBI 10.1 XBXL10_1g36791 X. laevis.L
NCBI 10.1 XBXL10_1g38683 X. laevis.S
NCBI 10.0 XBXT10g008301 X. tropicalis
ENSEMBL 10.0 copa X. tropicalis
Xenbase 9.2 gene12732 X. laevis.L
Xenbase 9.2 gene36880 X. laevis.S
JGI 9.1 Xelaev18040643m.g X. laevis.L
JGI 9.1 Xelaev18042803m.g X. laevis.S
Xenbase 9.1 gene27019 X. tropicalis
ENSEMBL 9.1 copa X. tropicalis
JGI 8.0 Xetrov14036445m.g X. tropicalis
JGI 7.2 Xelaev16029419m.g X. laevis.L
JGI 7.1 Xetro.K05035 X. tropicalis
JGI 6.0 XeXenL6RMv10031208m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000005840 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2790011 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2790002 X. tropicalis
JGI 4.1 gw1.279.224.1 X. tropicalis
JGI 4.1 gw1.279.200.1 X. tropicalis
JGI 4.1 gw1.279.2.1 X. tropicalis
JGI 4.1 e_gw1.279.200.1 X. tropicalis
JGI 4.1 e_gw1.279.2.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_279000011 X. tropicalis
JGI 4.1 e_gw1.279.224.1 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_279000002 X. tropicalis

mRNAs based on gene models(35)

Source Version Model Species
NCBI 10.1 XBmRNA72994 X. laevis.S
NCBI 10.1 XBmRNA69397 X. laevis.L
ENSEMBL 10.0 ENSXETT00000012848 X. tropicalis
ENSEMBL 10.0 ENSXETT00000066185 X. tropicalis
NCBI 10.0 mRNA041301 X. tropicalis
ENSEMBL 10.0 ENSXETT00000103856 X. tropicalis
Xenbase 9.2 rna36999 X. laevis.L
Xenbase 9.2 rna77403 X. laevis.S
Xenbase 9.1 rna52761 X. tropicalis
JGI 9.1 Xelaev18042803m X. laevis.S
JGI 9.1 Xelaev18040643m X. laevis.L
ENSEMBL 9.1 ENSXETT00000104756 X. tropicalis
ENSEMBL 9.1 ENSXETT00000103856 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095023 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077157 X. tropicalis
ENSEMBL 9.1 ENSXETT00000075771 X. tropicalis
ENSEMBL 9.1 ENSXETT00000074575 X. tropicalis
ENSEMBL 9.1 ENSXETT00000066185 X. tropicalis
ENSEMBL 9.1 ENSXETT00000012848 X. tropicalis
JGI 8.0 Xetrov14036445m X. tropicalis
JGI 7.2 Xelaev16029419m X. laevis.L
JGI 7.1 Xetro.K05035.2 X. tropicalis
JGI 7.1 Xetro.K05035.1 X. tropicalis
JGI 6.0 XeXenL6RMv10031208m X. laevis.L
JGI 4.1 gw1.279.224.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_279000011 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_279000002 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_2790011 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_2790002 X. tropicalis
JGI 4.1 e_gw1.279.224.1 X. tropicalis
JGI 4.1 e_gw1.279.2.1 X. tropicalis
JGI 4.1 e_gw1.279.200.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000012848 X. tropicalis
JGI 4.1 gw1.279.2.1 X. tropicalis
JGI 4.1 gw1.279.200.1 X. tropicalis

mRNAs from cDNA libraries (8)

Clone Accession Species Library Anatomy Stage
IMAGE:7695320 BC166233 X. tropicalis NIH_XGC_tropTe4 testis frog
NM_001127994 X. tropicalis
IMAGE:7020631 BC075251 X. laevis.L
NM_001093019 X. laevis.L
XM_018228961 X. laevis.L
XM_018233501 X. laevis.S
XM_041574501 X. laevis.S
XM_041574502 X. laevis.S

ESTs (282)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu077l15 BX683341 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu077m15 BX683357 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7623706 CX373256 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas077m08 AL775190 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7631059 CX396143 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:8963058 EL656455 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:7612047 CX404344 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TGas093m08 AL962299 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7584713 CX415741 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7596306 DR891221 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xthr04G12 CN120349 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:5380329 BQ525038 5' X. tropicalis NICHD_XGC_Emb8 whole organism NF stage 40 to NF stage 45
IMAGE:7688128 CX910933 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687570 CX909984 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687805 CX909604 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7686805 CX908244 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7686752 CX907855 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7686531 CX907644 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7670128 CX877304 5' X. tropicalis NIH_XGC_tropBrn4 brain frog
IMAGE:7656879 CX828549 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7653945 CX822793 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7653768 CX822550 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7653560 CX822420 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7652932 CX820949 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7651237 CX812419 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:7650348 CX811578 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
IMAGE:6999859 CF343324 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:6999859 CF343323 5' X. tropicalis NICHD_XGC_Swb1 whole organism frog
IMAGE:7528291 CX425112 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7530098 CX427011 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8865353 EL702373 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7538624 CX451178 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8863995 EL700460 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7552138 CX494707 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:8870475 EL711967 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:7558577 CX498111 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:9008399 EL837333 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8922072 EL836751 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8916744 EL830158 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8915551 EL828083 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8855004 EL817299 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8853728 EL815508 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8926600 EL673756 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8954993 EL662257 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8956761 EL661809 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8956523 EL660700 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8954845 EL655241 5' X. tropicalis NICHD_XGC_tropInt_62 intestine frog
IMAGE:8950863 EG651789 5' X. tropicalis NICHD_XGC_tropInt_60 intestine frog
IMAGE:7803159 DR837647 5' X. tropicalis NIH_XGC_tropFat1 fat body frog
IMAGE:7719566 CX983160 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7710529 CX966054 5' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7708552 CX962114 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7707706 CX960812 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO8516 CX956095 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO4499 CX935665 5' X. tropicalis NIH_XGC_tropTe5 testis frog
CAAO3705 CX934243 5' X. tropicalis NIH_XGC_tropTe5 testis frog
IMAGE:7794689 CX929174 5' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAN12216 CX928735 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TNeu021o17 AL636177 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu003e08 AL640183 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu077l15 AL777804 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu076n03 AL778716 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu077m15 AL780023 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu097i05 AL802911 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:8962665 EL654492 5' X. tropicalis NICHD_XGC_tropInt_66 intestine unspecified stage
IMAGE:8957370 EL655944 5' X. tropicalis NICHD_XGC_tropInt_63 intestine unspecified stage
CAAN11838 CX928027 5' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAN11014 CX926500 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7696319 CX925459 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7695688 CX925031 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7695320 CX924443 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7695529 CX924220 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7694886 CX923698 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7694903 CX923474 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7695073 CX923314 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7694625 CX922473 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7694103 CX921794 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7693181 CX919582 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692406 CX918825 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692354 CX918795 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692250 CX918730 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7692225 CX918184 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691788 CX917780 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:6979154 CF148553 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
IMAGE:6978006 CF216551 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
st30c11 DC172008 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
TTbA022d18 CR440016 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA066a15 CR448941 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
st43c17 DC177428 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
THdA036f15 CR581033 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
st56m17 DC180649 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7691925 CX917739 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691786 CX917424 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691582 CX917331 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691504 CX917110 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691587 CX917025 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691100 CX916607 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7691289 CX916238 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7690948 CX915835 5' X. tropicalis NIH_XGC_tropTe4 testis frog