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Summary Expression Phenotypes Gene Literature (0) GO Terms (9) Nucleotides (105) Proteins (31) Interactants (46) Wiki
XB-GENEPAGE-990836

Show:     All X. tropicalis X. laevis

Nucleotide sequences for smg9 - All

RefSeq mRNAs(4)
Models - Gene (17)
Models - mRNA (19)
mRNAs (6)
ESTs (34)

RefSeq mRNAs (4)

Accession Version Protein Name Length Protein Species
NM_001142146 NM_001142146.1 nonsense-mediated mRNA decay factor SMG9 3610 bp NP_001135618 X. tropicalis
XM_012966229 XM_012966229.3 protein SMG9 isoform X1 2143 bp XP_012821683 X. tropicalis
XM_012966230 XM_012966230.3 protein SMG9 isoform X1 2083 bp XP_012821684 X. tropicalis
NM_001097020 NM_001097020.1 nonsense-mediated mRNA decay factor SMG9 1834 bp NP_001090489 X. laevis.S

Models - Gene (17)

Source Version Model Species
NCBI 10.1 XBXL10_1g33851 X. laevis.S
NCBI 10.0 XBXT10g015167 X. tropicalis
ENSEMBL 10.0 smg9 X. tropicalis
Xenbase 9.2 gene39980 X. laevis.S
Xenbase 9.1 gene5151 X. tropicalis
ENSEMBL 9.1 smg9 X. tropicalis
JGI 8.0 Xetrov14031659m.g X. tropicalis
JGI 7.1 Xetro.G02139 X. tropicalis
ENSEMBL 4.1 ENSXETG00000004098 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_325000007 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_325000025 X. tropicalis
JGI 4.1 gw1.325.56.1 X. tropicalis
JGI 4.1 gw1.325.3.1 X. tropicalis
JGI 4.1 gw1.325.153.1 X. tropicalis
JGI 4.1 e_gw1.325.56.1 X. tropicalis
JGI 4.1 e_gw1.325.153.1 X. tropicalis
JGI 4.1 e_gw1.325.3.1 X. tropicalis

mRNAs based on gene models(19)

Source Version Model Species
NCBI 10.1 XBmRNA63919 X. laevis.S
NCBI 10.0 mRNA075006 X. tropicalis
ENSEMBL 10.0 ENSXETT00000008862 X. tropicalis
Xenbase 9.2 rna81784 X. laevis.S
Xenbase 9.1 rna16764 X. tropicalis
ENSEMBL 9.1 ENSXETT00000008862 X. tropicalis
JGI 8.0 Xetrov14031659m X. tropicalis
JGI 7.1 Xetro.G02139.1 X. tropicalis
JGI 7.1 Xetro.G02139.2 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_325000025 X. tropicalis
JGI 4.1 e_gw1.325.56.1 X. tropicalis
JGI 4.1 e_gw1.325.3.1 X. tropicalis
JGI 4.1 e_gw1.325.153.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000008865 X. tropicalis
ENSEMBL 4.1 ENSXETT00000008862 X. tropicalis
JGI 4.1 gw1.325.3.1 X. tropicalis
JGI 4.1 gw1.325.56.1 X. tropicalis
JGI 4.1 gw1.325.153.1 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_325000007 X. tropicalis

mRNAs from cDNA libraries (6)

Clone Accession Species Library Anatomy Stage
IMAGE:7724455 BC168445 X. tropicalis
NM_001142146 X. tropicalis
XM_012966229 X. tropicalis
XM_012966230 X. tropicalis
IMAGE:8317626 BC123225 X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
NM_001097020 X. laevis.S

ESTs (34)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8866826 EL705604 5' X. tropicalis NICHD_XGC_tropLimb_m limb NF stage 55 to NF stage 66
IMAGE:8905217 EL796950 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
TGas144i06 AL968735 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7577811 CX423952 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7540677 CX462107 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
TNeu018k18 AL638439 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu081i10 AL800162 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:6992364 CF242158 5' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:6976782 CF242373 5' X. tropicalis NICHD_XGC_Emb7 whole organism NF stage 20 to NF stage 27
TTpA012d15 BX709557 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7623459 CX372920 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
xtbs05A12 CN074510 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
xtbs21J05 CN082750 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:7687715 CX909646 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7849704 DT387959 5' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:8859313 EL823300 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:9011589 EL856544 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
THdA007l16 CR561144 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTpA012d15 BX709558 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
IMAGE:7687715 CX909645 3' X. tropicalis NIH_XGC_tropTe4 testis frog
TNeu081i10 BX696670 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7623459 DR899282 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:6992364 CF242159 3' X. tropicalis NICHD_XGC_Emb6 whole organism NF stage 14 to NF stage 19
IMAGE:8859313 EL823301 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8905217 EL796951 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:7577811 CX423951 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7540677 CX462106 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7849704 DT387958 3' X. tropicalis NIH_XGC_tropSkeMus1 skeletal muscle frog
IMAGE:5537080 BQ731711 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:4680245 BI445394 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:3473026 BI676172 5' X. laevis.S Wellcome CRC pRN3 oocyte oocyte unspecified stage
IMAGE:4970868 CF289724 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
IMAGE:8317626 DY549821 5' X. laevis.S NICHD_XGC_Emb10 whole organism NF stage 17 to NF stage 19
IMAGE:4970868 CF289725 5' X. laevis.S NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32