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Summary Expression Phenotypes Gene Literature (2) GO Terms (1) Nucleotides (210) Proteins (85) Interactants (261) Wiki
XB-GENEPAGE-993137

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for r3hdm2 - All

Models - Gene (28)
Models - mRNA (41)
mRNAs (25)
ESTs (77)

Models - Gene (28)

Source Version Model Species
NCBI 10.0 XBXT10g011949 X. tropicalis
NCBI 10.1 XBXL10_1g8116 X. laevis.L
NCBI 10.1 XBXL10_1g10757 X. laevis.S
ENSEMBL 10.0 r3hdm2 X. tropicalis
JGI 9.1 Xelaev18013431m.g X. laevis.L
JGI 9.1 Xelaev18015922m.g X. laevis.S
Xenbase 9.1 gene4693 X. tropicalis
Xenbase 9.2 gene41596 X. laevis.L
ENSEMBL 9.1 r3hdm2 X. tropicalis
JGI 8.0 Xetrov14010238m.g X. tropicalis
JGI 7.1 Xetro.B01384 X. tropicalis
JGI 7.2 Xelaev16069238m.g X. laevis.L
JGI 6.0 XeXenL6RMv10023645m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000017153 X. tropicalis
JGI 4.1 e_gw1.485.23.1 X. tropicalis
JGI 4.1 e_gw1.485.22.1 X. tropicalis
JGI 4.1 e_gw1.485.6.1 X. tropicalis
JGI 4.1 gw1.485.22.1 X. tropicalis
JGI 4.1 gw1.485.23.1 X. tropicalis
JGI 4.1 gw1.485.6.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4850005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4850006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4850022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4850023 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4850011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4850003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_485000011 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_485000003 X. tropicalis

Models - mRNA (41)

Source Version Model Species
NCBI 10.0 mRNA059294 X. tropicalis
NCBI 10.1 XBmRNA15352 X. laevis.L
NCBI 10.1 XBmRNA20236 X. laevis.S
ENSEMBL 10.0 ENSXETT00000068385 X. tropicalis
ENSEMBL 10.0 ENSXETT00000037400 X. tropicalis
ENSEMBL 10.0 ENSXETT00000078054 X. tropicalis
ENSEMBL 10.0 ENSXETT00000063883 X. tropicalis
JGI 9.1 Xelaev18013431m X. laevis.L
JGI 9.1 Xelaev18015922m X. laevis.S
Xenbase 9.1 rna15300 X. tropicalis
Xenbase 9.2 rna84089 X. laevis.L
ENSEMBL 9.1 ENSXETT00000096592 X. tropicalis
ENSEMBL 9.1 ENSXETT00000037400 X. tropicalis
ENSEMBL 9.1 ENSXETT00000078054 X. tropicalis
ENSEMBL 9.1 ENSXETT00000063883 X. tropicalis
ENSEMBL 9.1 ENSXETT00000073064 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095808 X. tropicalis
ENSEMBL 9.1 ENSXETT00000068385 X. tropicalis
JGI 8.0 Xetrov14010238m X. tropicalis
JGI 7.1 Xetro.B01384.2 X. tropicalis
JGI 7.1 Xetro.B01384.5 X. tropicalis
JGI 7.1 Xetro.B01384.3 X. tropicalis
JGI 7.1 Xetro.B01384.1 X. tropicalis
JGI 7.1 Xetro.B01384.4 X. tropicalis
JGI 7.2 Xelaev16069238m X. laevis.L
JGI 6.0 XeXenL6RMv10023645m X. laevis.L
JGI 4.1 e_gw1.485.23.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000037400 X. tropicalis
JGI 4.1 e_gw1.485.22.1 X. tropicalis
JGI 4.1 e_gw1.485.6.1 X. tropicalis
JGI 4.1 gw1.485.22.1 X. tropicalis
JGI 4.1 gw1.485.23.1 X. tropicalis
JGI 4.1 gw1.485.6.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_4850005 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4850006 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4850022 X. tropicalis
JGI 4.1 estExt_Genewise1.C_4850023 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_4850011 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_4850003 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_485000011 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_485000003 X. tropicalis

mRNAs (25)

Clone Accession Species Library Anatomy Stage
TNeu122i02 CR942707 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7688734 BC167616 X. tropicalis NIH_XGC_tropTe4 testis frog
NM_001130339 X. tropicalis
XM_018091108 X. tropicalis
XM_012956546 X. tropicalis
XM_031895737 X. tropicalis
XM_031895736 X. tropicalis
XM_031895735 X. tropicalis
IMAGE:6948407 BC094491 X. laevis.L
NM_001095964 X. laevis.L
XM_041581096 X. laevis.L
XM_041581095 X. laevis.L
XM_041581094 X. laevis.L
XM_041581093 X. laevis.L
XM_041581092 X. laevis.L
XM_041581091 X. laevis.L
XM_041581090 X. laevis.L
XM_041584416 X. laevis.S
XM_041584415 X. laevis.S
XM_041584414 X. laevis.S
XM_041584413 X. laevis.S
XM_041584412 X. laevis.S
XM_041584411 X. laevis.S
XM_041584410 X. laevis.S
XM_041584409 X. laevis.S

ESTs (77)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:7661607 CX842960 5' X. tropicalis NIH_XGC_tropBrn3 brain frog
CAAO12598 CX963649 5' X. tropicalis NIH_XGC_tropTe5 testis frog
st38c07 DC176183 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
xtbs10E15 CN075342 5' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:8921592 EL836303 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7686552 CX908146 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7687543 CX909093 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7688734 CX912218 5' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAN10893 CX926277 5' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAN11356 CX927135 5' X. tropicalis NIH_XGC_tropTe4 testis frog
TNeu099h02 AL787005 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu122i02 AL792304 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7641168 CX795099 5' X. tropicalis NIH_XGC_tropBrn2 brain frog
xtbs10E15 CN075341 3' X. tropicalis Xenopus tropicalis xtbs plasmid library central nervous system NF stage 58 to NF stage 64
IMAGE:8921592 EL836304 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:7661607 CX842959 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7686552 CX908145 3' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAN10893 CX926276 3' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAN11356 CX927134 3' X. tropicalis NIH_XGC_tropTe4 testis frog
CAAO12598 CX963648 3' X. tropicalis NIH_XGC_tropTe5 testis frog
TNeu099h02 BX692138 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu122i02 BX699735 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7641168 CX795098 3' X. tropicalis NIH_XGC_tropBrn2 brain frog
xl309d13 DC125789 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl263m07 DC112881 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl301c13 DC123417 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl304e24 DC124337 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl266b03 DC113576 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl261m07 DC112269 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
xl302c13 DC123714 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
IMAGE:7298901 CO384876 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
IMAGE:7297752 CO389133 5' X. laevis.L Blumberg_Cho dorsal blastopore lip upper blastopore lip NF stage 7 to NF stage 9
XL458m23ex BP688902 5' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:8532734 EB469764 5' X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
xl311c24 DC126383 5' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL203h24 BJ623128 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL206h07 BJ623898 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL207h07 BJ624156 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
IMAGp998G038087 BX851269 5' X. laevis.L Soares NXEG egg unfertilized egg stage
XL162a04 BJ613084 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL179o02 BJ617222 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL181o01 BJ617699 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL182l01 BJ617876 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL182n01 BJ617899 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL182p03 BJ617930 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL183o02 BJ618170 5' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL014g03 BJ031715 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL020l07 BJ033411 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL085h14 BJ066214 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL103i02 BJ057862 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL064a20 BJ059840 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:5278742 BQ398582 5' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGE:5155712 CA792823 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:5156462 CA793123 5' X. laevis.L NICHD_XGC_Emb1 whole organism NF stage 10
IMAGE:6325433 CA973292 5' X. laevis.L Wellcome CRC pSK egg egg unfertilized egg stage
IMAGE:6876596 CB201447 5' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:6940150 CD100385 5' X. laevis.L NICHD_XGC_Tad1 whole organism NF stage 54 to prometamorphosis stage
IMAGE:5515350 CF290544 5' X. laevis.L NICHD_XGC_Emb4 whole organism NF stage 31 to NF stage 32
XL037c11 BJ036695 5' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
PBX0163E04 AW646399 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
IMAGE:3301432 BE132337 5' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage
rxl309d13 DC090784 3' X. laevis.L Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library Keller explant NF stage 10.5 to NF stage 15
XL444j07ex BP719981 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
XL458m23ex BP724028 3' X. laevis.L Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library ectoderm NF stage 12.5
IMAGE:8532734 EC277285 3' X. laevis.L NICHD_XGC_limb_m limb NF stage 54 to NF stage 61
XL182n01 BJ634431 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL182p03 BJ634463 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL206h07 BJ640490 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL207h07 BJ640727 3' X. laevis.L NIBB Mochii normalized Xenopus early gastrula library whole organism NF stage 10.5
XL064a20 BJ092101 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL014g03 BJ046750 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL020l07 BJ048702 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15
XL103i02 BJ075736 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL085h14 BJ083536 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
IMAGE:5278742 BQ398581 3' X. laevis.L Soares NXEG egg unfertilized egg stage
IMAGE:6876596 CB564528 3' X. laevis.L NICHD_XGC_Tad2 whole organism NF stage 62
IMAGE:3301658 BF071866 3' X. laevis.L Blackshear/Soares normalized Xenopus egg library egg unfertilized egg stage