Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Phenotypes Gene Literature (4) GO Terms (4) Nucleotides (80) Proteins (44) Interactants (66) Wiki
XB-GENEPAGE-993898

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for otop3 - All

Models - Gene (22)
Models - mRNA (28)
mRNAs (7)
ESTs (9)

Models - Gene (22)

Source Version Model Species
NCBI 10.0 XBXT10g006070 X. tropicalis
NCBI 10.1 XBXL10_1g40052 X. laevis.L
NCBI 10.1 XBXL10_1g43038 X. laevis.S
ENSEMBL 10.0 otop3 X. tropicalis
JGI 9.1 Xelaev18044041m.g X. laevis.L
Xenbase 9.1 gene7144 X. tropicalis
Xenbase 9.2 gene18058 X. laevis.L
ENSEMBL 9.1 otop3 X. tropicalis
JGI 8.0 Xetrov14039927m.g X. tropicalis
JGI 7.1 Xetro.J00161 X. tropicalis
JGI 7.2 Xelaev16069913m.g X. laevis.L
JGI 6.0 XeXenL6RMv10005508m.g X. laevis.L
JGI 6.0 XeXenL6RMv10051996m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000027068 X. tropicalis
JGI 4.1 e_gw1.545.139.1 X. tropicalis
JGI 4.1 e_gw1.545.10.1 X. tropicalis
JGI 4.1 e_gw1.545.84.1 X. tropicalis
JGI 4.1 gw1.545.10.1 X. tropicalis
JGI 4.1 gw1.545.139.1 X. tropicalis
JGI 4.1 gw1.545.84.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_545000002 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_545000001 X. tropicalis

Models - mRNA (28)

Source Version Model Species
NCBI 10.0 mRNA030033 X. tropicalis
NCBI 10.1 XBmRNA75335 X. laevis.L
NCBI 10.1 XBmRNA80901 X. laevis.S
ENSEMBL 10.0 ENSXETT00000027330 X. tropicalis
ENSEMBL 10.0 ENSXETT00000027327 X. tropicalis
ENSEMBL 10.0 ENSXETT00000070983 X. tropicalis
ENSEMBL 10.0 ENSXETT00000107441 X. tropicalis
JGI 9.1 Xelaev18044041m X. laevis.L
Xenbase 9.1 rna23057 X. tropicalis
Xenbase 9.2 rna52785 X. laevis.L
ENSEMBL 9.1 ENSXETT00000070983 X. tropicalis
ENSEMBL 9.1 ENSXETT00000088191 X. tropicalis
ENSEMBL 9.1 ENSXETT00000027330 X. tropicalis
ENSEMBL 9.1 ENSXETT00000027327 X. tropicalis
JGI 8.0 Xetrov14039927m X. tropicalis
JGI 7.1 Xetro.J00161.1 X. tropicalis
JGI 7.2 Xelaev16069913m X. laevis.L
JGI 6.0 XeXenL6RMv10005508m X. laevis.L
JGI 6.0 XeXenL6RMv10051996m X. laevis.L
JGI 4.1 e_gw1.545.139.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000027327 X. tropicalis
JGI 4.1 e_gw1.545.10.1 X. tropicalis
JGI 4.1 e_gw1.545.84.1 X. tropicalis
JGI 4.1 gw1.545.10.1 X. tropicalis
JGI 4.1 gw1.545.139.1 X. tropicalis
JGI 4.1 gw1.545.84.1 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_545000002 X. tropicalis
JGI 4.1 fgenesh1_pm.C_scaffold_545000001 X. tropicalis

mRNAs (7)

Clone Accession Species Library Anatomy Stage
IMAGE:7820302 BC155406 X. tropicalis
NM_001113113 X. tropicalis
XM_012971513 X. tropicalis
AY177202 X. laevis.L
NM_001085725 X. laevis.L
XM_041576926 X. laevis.L
XM_041577970 X. laevis.S

ESTs (9)

Clone Accession 5'/3' Species Library Anatomy Stage
IMAGE:8887788 EL846278 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TTbA002i02 CR448138 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:8887788 EL846279 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
TTbA002i02 CR448139 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
IMAGE:8530781 EB479546 5' X. laevis.L NICHD_XGC_int_m whole organism NF stage 56 to NF stage 62
XL095i16 BJ071805 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL083m23 BJ065669 5' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL083m23 BJ083002 3' X. laevis.L NIBB Mochii normalized Xenopus tailbud library whole organism NF stage 25
XL001i21 BJ055602 3' X. laevis.L NIBB Mochii normalized Xenopus neurula library whole organism NF stage 15