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Summary Expression Phenotypes Gene Literature (1) GO Terms (10) Nucleotides (302) Proteins (66) Interactants (23) Wiki
XB-GENEPAGE-994633

Show:     All X. tropicalis X. laevis.L

Nucleotide sequences for prpf39.1 - All

Models - Gene (36)
Models - mRNA (44)
mRNAs (14)
ESTs (153)

Models - Gene (36)

Source Version Model Species
NCBI 10.0 XBXT10g008789 X. tropicalis
NCBI 10.1 XBXL10_1g35839 X. laevis.L
NCBI 10.1 XBXL10_1g37317 X. laevis.S
ENSEMBL 10.0 prpf39.1 X. tropicalis
JGI 9.1 Xelaev18039608m.g X. laevis.L
JGI 9.1 Xelaev18041253m.g X. laevis.S
Xenbase 9.1 gene30771 X. tropicalis
Xenbase 9.2 gene40509 X. laevis.L
Xenbase 9.2 gene5820 X. laevis.S
ENSEMBL 9.1 prpf39.1 X. tropicalis
JGI 8.0 Xetrov14034705m.g X. tropicalis
JGI 7.1 Xetro.H01405 X. tropicalis
JGI 7.2 Xelaev16036003m.g X. laevis.L
JGI 6.0 XeXenL6RMv10026224m.g X. laevis.L
JGI 6.0 XeXenL6RMv10035931m.g X. laevis.L
ENSEMBL 4.1 ENSXETG00000003066 X. tropicalis
JGI 4.1 e_gw1.634.10.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_6340004 X. tropicalis
JGI 4.1 e_gw1.634.20.1 X. tropicalis
JGI 4.1 e_gw1.634.21.1 X. tropicalis
JGI 4.1 e_gw1.634.4.1 X. tropicalis
JGI 4.1 gw1.634.20.1 X. tropicalis
JGI 4.1 gw1.634.21.1 X. tropicalis
JGI 4.1 gw1.634.4.1 X. tropicalis
JGI 4.1 gw1.634.10.1 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6340004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6340010 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6340020 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6340021 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_6340006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6340012 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6340013 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_6340005 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_634000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_634000012 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_634000013 X. tropicalis

Models - mRNA (44)

Source Version Model Species
NCBI 10.0 mRNA043551 X. tropicalis
NCBI 10.1 XBmRNA67720 X. laevis.L
NCBI 10.1 XBmRNA70443 X. laevis.S
ENSEMBL 10.0 ENSXETT00000063577 X. tropicalis
ENSEMBL 10.0 ENSXETT00000006658 X. tropicalis
JGI 9.1 Xelaev18039608m X. laevis.L
JGI 9.1 Xelaev18041253m X. laevis.S
Xenbase 9.1 rna58762 X. tropicalis
Xenbase 9.2 rna82533 X. laevis.L
Xenbase 9.2 rna17034 X. laevis.S
ENSEMBL 9.1 ENSXETT00000006658 X. tropicalis
ENSEMBL 9.1 ENSXETT00000095217 X. tropicalis
ENSEMBL 9.1 ENSXETT00000063577 X. tropicalis
ENSEMBL 9.1 ENSXETT00000077103 X. tropicalis
JGI 8.0 Xetrov14034705m X. tropicalis
JGI 7.1 Xetro.H01405.2 X. tropicalis
JGI 7.1 Xetro.H01405.3 X. tropicalis
JGI 7.1 Xetro.H01405.4 X. tropicalis
JGI 7.1 Xetro.H01405.1 X. tropicalis
JGI 7.1 Xetro.H01405.5 X. tropicalis
JGI 7.2 Xelaev16036003m X. laevis.L
JGI 6.0 XeXenL6RMv10026224m X. laevis.L
JGI 6.0 XeXenL6RMv10035931m X. laevis.L
JGI 4.1 e_gw1.634.10.1 X. tropicalis
ENSEMBL 4.1 ENSXETT00000006658 X. tropicalis
JGI 4.1 e_gw1.634.20.1 X. tropicalis
JGI 4.1 e_gw1.634.21.1 X. tropicalis
JGI 4.1 e_gw1.634.4.1 X. tropicalis
JGI 4.1 gw1.634.20.1 X. tropicalis
JGI 4.1 gw1.634.21.1 X. tropicalis
JGI 4.1 gw1.634.4.1 X. tropicalis
JGI 4.1 gw1.634.10.1 X. tropicalis
JGI 4.1 estExt_FilteredModels1.C_6340004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6340004 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6340010 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6340020 X. tropicalis
JGI 4.1 estExt_Genewise1.C_6340021 X. tropicalis
JGI 4.1 estExt_fgenesh1_kg.C_6340006 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6340012 X. tropicalis
JGI 4.1 estExt_fgenesh1_pg.C_6340013 X. tropicalis
JGI 4.1 estExt_fgenesh1_pm.C_6340005 X. tropicalis
JGI 4.1 fgenesh1_kg.C_scaffold_634000006 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_634000012 X. tropicalis
JGI 4.1 fgenesh1_pg.C_scaffold_634000013 X. tropicalis

mRNAs (14)

Clone Accession Species Library Anatomy Stage
IMAGE:7809869 BC124575 X. tropicalis
TEgg059j01 CR761335 X. tropicalis
TNeu065l12 CU075798 X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7585679 BC135138 X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
NM_001122801 X. tropicalis
XM_012967893 X. tropicalis
IMAGE:5079121 BC098999 X. laevis.L
IMAGE:3398688 BC079828 X. laevis.S NICHD_XGC_Emb3 whole organism NF stage 24 to NF stage 25
NM_001096111 X. laevis.L
XM_018232376 X. laevis.S
XM_018232375 X. laevis.S
XM_041572149 X. laevis.L
XM_041572148 X. laevis.L
XM_041572147 X. laevis.L

ESTs (153)

100 ESTs displayed. View all

Clone Accession 5'/3' Species Library Anatomy Stage
TNeu073c06 BX683656 - X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
IMAGE:7025924 CF785409 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
IMAGE:8890334 EL850084 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9013573 EL859164 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8927457 EL674766 5' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8911807 EL807542 5' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8859336 EL823741 5' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8883223 EL838682 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8885189 EL841589 5' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:7637763 CX407725 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7787211 CX329069 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
XZT11685 CX312033 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
st81g16 DC186853 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st58k06 DC181083 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
st57k06 DC180837 5' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:7745947 DN040802 5' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
IMAGE:7600989 DR892523 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7556928 CX505083 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7543888 CX459797 5' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7595197 CX332582 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7622670 CX371948 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7634531 CX375948 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7689566 CX913760 5' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7735391 DN020904 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7742938 DN035606 5' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7585679 CX318339 5' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
TTbA066p24 CR429518 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA033c11 CR431406 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA043a18 CR434852 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA076o15 CR438474 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA031o06 CR580720 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA053g23 CR582613 5' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
xthr33H18 CN109500 5' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
TTbA002a07 CR408375 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA027d21 CR411342 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA047g08 CR416356 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA047l24 CR420439 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA060k24 CR427619 5' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA007a03 BX709387 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA023d04 BX715137 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA068p06 BX716334 5' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TGas022l14 AL628862 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
TGas134e02 AL958031 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:7093646 CK655424 5' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TNeu033n12 AL656030 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu051g21 AL679707 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu073c06 AL781877 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu065l12 AL784426 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu085b05 AL787320 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu099i13 AL790232 5' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TGas134i02 AL958049 5' X. tropicalis XGC-gastrula whole organism NF stage 10.5 to NF stage 12
IMAGE:6989895 CF219219 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:6989895 CF219220 5' X. tropicalis NICHD_XGC_Emb5 whole organism NF stage 10 to NF stage 13
IMAGE:8885189 EL841590 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:9013573 EL859165 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
IMAGE:8927457 EL674765 3' X. tropicalis NICHD_XGC_tropThy1 thymus frog
IMAGE:8911807 EL807543 3' X. tropicalis NICHD_XGC_tropTail_m tail NF stage 55 to NF stage 66
IMAGE:8859336 EL823742 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8916272 EL829461 3' X. tropicalis NICHD_XGC_tropTe1 testis frog
IMAGE:8883223 EL838683 3' X. tropicalis NICHD_XGC_trop_25 whole organism NF stage 25
XZT11685 CX312032 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
rst81g16 DC156762 3' X. tropicalis Xenopus tropicalis embryo gastrula whole organism NF stage 10 to NF stage 12.5
IMAGE:8942104 EL633602 3' X. tropicalis NICHD_XGC_tropBone1 bone tissue frog
IMAGE:7600989 DR892522 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7787211 DR904547 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7709480 CX965045 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7663140 CX846130 3' X. tropicalis NIH_XGC_tropBrn3 brain frog
IMAGE:7689566 CX913759 3' X. tropicalis NIH_XGC_tropTe4 testis frog
IMAGE:7715048 CX974780 3' X. tropicalis NIH_XGC_tropInt1 intestine frog
IMAGE:7735391 DN020903 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7742778 DN034800 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7742938 DN035605 3' X. tropicalis NIH_XGC_tropLiv1 liver frog
IMAGE:7745947 DN040801 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
THdA053g23 CR582614 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA053k15 CR582644 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
IMAGE:7585679 CX318338 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7595197 CX332581 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7622670 CX371947 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7637763 CX407724 3' X. tropicalis NIH_XGC_tropTad5 whole organism NF stage 35 and 36 to NF stage 41
IMAGE:7570655 CX455040 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7556928 CX505082 3' X. tropicalis NIH_XGC_tropGas7 whole organism NF stage 10.5 to NF stage 12.5
IMAGE:7447829 CV808068 3' X. tropicalis NIH_XGC_tropKid1 mesonephric kidney frog
TTbA033c11 CR431407 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA043a18 CR434853 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA076o15 CR438475 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
THdA031o06 CR580721 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
THdA048g19 CR581136 3' X. tropicalis XGC-tailbud-head head NF stage 28 to NF stage 29 and 30
TTbA002a07 CR409372 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA027d21 CR411343 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA047g08 CR416357 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTbA047l24 CR420440 3' X. tropicalis XGC-tailbud whole organism NF stage 28 to NF stage 29 and 30
TTpA010n11 BX705409 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA007a03 BX709388 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
TTpA023d04 BX715138 3' X. tropicalis XGC-tadpole whole organism NF stage 35 and 36 to NF stage 40
xthr33H18 CN109499 3' X. tropicalis Xenopus tropicalis xthr plasmid library head NF stage 25 to NF stage 35 and 36
IMAGE:7025924 CF785410 3' X. tropicalis XtSt10-30 whole organism NF stage 10 to NF stage 29 and 30
TNeu065l12 BX686161 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu051g21 BX687682 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21
TNeu085b05 BX690962 3' X. tropicalis XGC-neurula whole organism NF stage 13 to NF stage 21