XB-CLONE-2228962
Clone Name: nphs1-862
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Gene:
nphs1.S
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Species: Xenopus laevis
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Description: EXRC Clone Number 862.
Xenopus laevis nephrosis 1, congenital, Finnish type (nephrin).
Image EST 4964461, Accession AY902238.
Full Length.
To generate probe for in situ.
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Sequence:
Full length sequence: AY902238 [+]
CCACGCGTCCGCGGAGAGAGTAAAAGAGTGAGCTGGAGTGAGAGGGGAGAAGAGAGAGACAGGGAGAGAAAGAGAGGGACAGAGAAGGGGACAGCGAGAG
TCTGTATCATACAGGTAAGGAGGGAGGAGAAGATCGAGGCTCAGGGGAAGTCTAGAGGCACCTGCAGTTGGAAGTAACAGAGGACACTGGGAGAGTTGGA
TGCACAGGACAAGAAGGCTGATACTCTGATCTGCCAGTTTAATCTCTCCACTGATTCAGTGCAACTCCCAGGACTCCCTGCGCCCCTAGGACTGAGTTTG
GAATATGGTGCCTGTGTTGTTTGTCGCGGCTTGTTGCAGTTGGTGGATGTTCAGGGAAGGTGTGAGTGCTGTGCAGCAGGTATTTCGAGTGCAACCAGAC
AATATCACCATTGTGAAGGGATCGACCGCGCTGTTGAGTTGTGAGGTGGAACATGGGACTGGGATGGTGCAGTGGGAAAAGAATGGTCTCCTGTTGGGAC
CGGACAGGAATATCCCAGGGTTCCCTCGTTACAGTATGACTGGAGACCCTCACAAAGGCGAATACAACCTGCGCATTGAGCGTATCGAGCTGGATGACGA
CGCTGAGTATCACTGTCAGGTGGGAAGGTCAGAGGTCAGCTTGGGCATCATATCCCTCACTGCTCTCATCAATGTCCTCATTCCCCCCAAAGCACCTACT
TTTGAGGAGCATGCTGTGGGCAGCAGAGTGACTTGGGTTTACGGGGTGGAATACACAGTCACCTGCCAAGCAACTGATGCCAAACCGGCTGCTGTATTGA
CCATTAAAAAGAGTGATCTGGAGGTGTCTGGAGATTCATCTACAAGCCCAGGATCAAGAGACAGACTGGAGAACACAGCACTGGTGACAAAAGTCATCCC
CCAGAGTTCAGATAATGGAAAGCTACTGACCTGCTTGGCATTAAATCCAGCTCTACAGACCCCAATCACCGTGAGCTTCACCATGAATGTCCTGTTTCCA
CCAAATGCTCCGATTATAGAAGGTTATACTGGGCCATCGGTTAAAGCTGGGGAAACACTGAAGCTCATCTGCATTTCTTTAAGTGGAAACCCCCTGGCCA
CATTACAGTGGTCAAAGAATGATGACGTTGTGTCAACACGTTGGGAGACGGATGAGGTGGTCCGCTCTTCCCGTAGTCACCTGACCCTGAGCATAAAACC
TGCAGATAACATGGCGGTTGTGAGCTGCGAAGCTGTAAATCATGTGACTCCACAAACTCTCAAAACCAGCATCATCCTCAATGTTGTGTTTCTGCCTACA
GAAGTAACCATCCTTGGCTCGCCAAGTGGTCCAGAGAAATCCTCTCTGTCGTTCTCCTGTTTTACTGCTGCCAGTAACCCTCCTGTACAGATCCGCTGGT
GGCTGGGCCCAAAAGAACTGGTGAACACCATTGTCACCATCACTGATGCCGCTCATGGTGGAAAGGTGACAATGTCCAACCTCACCATGGTGGCTCTTCG
AGAAGAGCATGGAATGTCGTTGACCTGTGAGGCCTTTAATGAGGTCATTCTCTACACCAAATCCAACAGCGTTACCCTAAGTGTGCAATACCCTCCACAG
AATGTCTGGATTGAGGCCCCTCCAACTGATAAGTTCTTCCGGGCGGGTACGGCTGTGAAGATGACTTGTTTCTCTAGTGGTGGAAACCCACCACCCAGGC
TTACCTGGATCAAGGATACTAAAAGTCTGAGTGGGGGAACGCAGATCCATTCGGGGAAAATTGTCACAAAAGAAATTACAATTATAACCGTCCCAAGCGA
CAATCTGGCCACGTACCGGTGCAACGCCAGCAACATTGGCAAGACAGCGCTGACTGCCAGCACGAAACTCAAGGTCCAGTTTCCTGCCATAGATGTAAAT
ATAATGAGCAGTGCCAAGGAGTATCGCCGAGGTTCTACCATTACATTGACCTGTGTCACCGGCAGCAGTAACCCCGCATCGACTATATCCTGGGTAAAGA
ATGGAGAACAGTTAAAAGCCCAAGATTTGGGGAGAAAACCTTCACTGTATGGGGGAATTTCCAGTTCCAGTCGTGTCACACTGATAGCAACATCTAAGGA
CAATGGAAGACGAGTGTCCTGTGAGGCCTTCAGCAGTGTCCTCAACGAGGCCGTCAATACCTTCTACAAGCTCAATATCCTGTTTCCTCCTGAGTTTCTG
GATGATCAGCCAACGGTGGTACAAGCTGTGGAACATGGAGCAGCCCTCATTCCCGTCCGTGTCAGGGCCAACCCACCTCAAATCAACTACACATGGAGTC
TTTGGGGCGAGAAACTGATCAGAGATGGAGCATACCGACATCACCTGCGCGGCGAGGGGGCCCTGGAGATATGGAACGTGAGCCGCGCTGACTCTGGCAT
TTACAATGTGACCTGTGTAAATAAAGAGGGGAAGAACAGTGTTGTCATAAGACTGGATGTGCAGTACTCCCCCACCATTCGCAGTCTCGGTGACACAGAG
GTGGATCTCGGGGCAGACGCAGAGATCGTGTGCACGGCGGATGCCAATCCAGTGACAGACTCAATGTTCCAGTGGAGATGGCTGGGTGATGAGGAGCGAG
ACCTCTCTGCCTTGGAACGTAGAGTAGATGGAGTGACCGGACGCCTCGTTATCCGGGAAGCCAAGAGAACGGACGCCGGGCGATACGAGTGCGCTGTAGA
TAACGGGATCCCTCCATCCGTCAAGGCCGATGCTCGTCTGATTGTTCGATTTAAGCCTGATATACACAAGGGGGTGCACTTGAGCAAAGTGGCCGTTCCA
GGTGATGGAAAGAGCGTGGCGGCGTTGGTGTGTAAAGCCGAGGGAATCCCCAGTGTGGCGTTCAGCTGGGCCAAGAATGGGGTATCTCTGGATCTAAAAG
GTCCCAGGTACTCGGAGAAGACTTTTCACGAGCTGTCGGTTCACACCAGCACTCTGGTCATTTCCAACGTGAGTGCGGTTAAGGACTATGCCCTCTTCAC
ATGTACAGCCATGAACACCCTGGGGGTGGACAGTTTCTCCATTCAGCTCGTCAGCACCAGCCGTCCTGACCCTCCCTCAGGTCTGAAAGTCATTGGTTTC
ACTCATAACTCAGTGACGCTACAATGGAGTTCCGGATTTGATGGCGGAGCAGAGCAAAAATTTCGAGTCAGGTACCGCTGGCCCGAAACTGACAGTCACA
TGTACGTGGACGTATTCCCACCCCAGGATACCGTCTTCACCATCACCGGCCTGAAAGGCAGCACCGCCTATAACTTCTCAGTCAATGCGATTAACGCCTT
GGGGGAAAGCGACTACGCAGACCAGGGGGCGGTGGTTAGTGTTACCACTAAAGAGACAACGTTGCTTCTGGTGCCTACACAGCAGCCCACCCGTGTCCCC
GTGGCAGAATCCCTTGAGTGGCCACCCTACATATTGGCTGCTGTTTGTGCCGGTGGCGCCCTCCTTCTTATATCAAATGCGGCTTTTATTGGCTGCCTGG
TGAAAAGAAGCAGAGACAAGTCCCAAGGAGGAGAAGGTGAGAAGAAAGACGAGAGCGGCCAAGAACGCACACTTAATGAATACGGAGATGGTGAGCTCAT
CAACACCCATGCGAAGAAGACTCTGCTGATTGATAGTGGTTCGGAGACAGGTTCTAGTCTTTACCAAGACAGCACCTCAGAATCTGGAATATATTACTAC
CCTGTTCGAGATTACAGACCCTCGCTCTTCCCTCACTATGAGGTTCCAGAGAGAGGAGAACCAGGGATCCAAGGTTGGGAAGAGGGCGGATATGAGGACT
GGTATGCTACTTCTGAAGGCCACGAGTATGCGGAAGTAGGAGAAGATTACCCACAATCCTCTAGAGTCAGGTGGCATAACAGAGAAATGGCCAATCAGGG
AAGAGAGACATCATGGGCAGAATACCAGGATCCAGGGAGATTAAGAATCTATGATGAGGCAGATGCTCCCTTGTCTGACATTTATGAGACTCCGTATGGG
GGGCGGGGGCAGCTAGTCTAACTATATTGTTTGCAATTCTGTGATTTCGTTTTT
5' EST: BI477611 [+]gagagagtaaaagagtgagctggagtgagaggggagaagagagagacagggagagaaagagagggacagagaaggggacagcgagagtctgtatcataca
ggtaaggagggaggagaagatcgaggctcaggggaagtctagaggcacctgcagttggaagtaacagaggacactgggagagttggatgcacaggacaag
aaggctgatactctgatctgccagtttaatctctccactgattcagtgcaactcccaggactccctgcgcccctaggactgagtttggaatatggtgcct
gtgttgtttgtcgcggcttgttgcagttggtggatgttcagggaaggtgtgagtgctgtgcagcaggtatttcgagtgcaaccagacaatatcaccattg
tgaagggatcgaccgcgctgttgagttgtgaggtggaacatgggactgggatggtgcagtgggaaaagaatggtctcctgttgggaccggacaggaatat
ccccggggttccc
3' EST: BM179506 [+]tcatggcagaatccctttaatatgggtctaggaacccctagaatatatatatatatatatacatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatacatatatatatatatatatatatacaggtacatttagaaaatgaaggcaaaatgttaccccccaccaaaaacgaaat
cacagaattgcaaacaatatagttagactagctgcccccgccccccatacggagtctcataaatgtcagacaagggagcatctgcctcatcatagattct
taatctccctggatcctggtattctgcccatgatgtctctcttccctgattggccatttctctgttatgccacctgactctagaggattgtgggtaatct
tctcctacttccg
Library:
Description: Cloned unidirectionally. Primer: Oligo dT. Average insert size 2.4 kb. Constructed by Life Technologies. Note: this is a Xenopus Gene Collection library.Anatomy: spleen | Stage: |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | |
Usage:
Whole mount in situ hybridization:
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Expressed in kidney.
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Probes:
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Type |
Size |
Promoter |
Linearization Site |
Description |
antisense |
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T7 |
SalI |
SmaI can also be used. |
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Suppliers:
Search for clone at:
EXRC