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Search Criteria

Gene/Clone	Species	Stage	Anatomy Item	Experimenter
cdx2	xenopus		endoderm [+] hypochord,head endoderm,archenteron,archenteron floor,gastrocoel roof plate,post-anal gut,central endoderm,endodermal cell,vegetal endoderm,suprablastoporal endoderm,sub-blastoporal endoderm,dorsal endoderm,pharyngeal endoderm,hindgut primordium,midgut primordium,foregut endoderm,dorsal crest of the endoderm,monociliated cell,archenteron roof midline,left-right organizer primordium,left-right organizer,ventral endoderm,posterior endoderm,anterior endoderm,Roux spot,acinar cell,alpha cell,anterior foregut,anterior hindgut endoderm,antrum,archenteron floor,archenteron roof midline,beta cell,blastopore lip,capillary system of liver,cardia,colon,delta cell,distal stomach,dorsal endoderm,dorsal foregut,dorsal pancreatic bud,dorsal posterior hindgut endoderm,duodenum,enteric neuron,epsilon cell,exocrine pancreas,external coil of the small intestine,fasciculated network of fibrils,first pancreatic bud,foregut epithelium,fundus,gall bladder,gall bladder primordium,gamma cell,gastrocoel roof plate,germinal vesicle,hepato-pancreatic progenitor cell,hepatocyte,hindgut endoderm,ileum,internal coil of the small intestine,intestinal stem cell,islets of Langerhans,left-right organizer,left-right organizer primordium,liver diverticulum,liver parenchyme,liver primordium,lower blastopore lip,lung bud,lung primordium,mitochondrial cloud,monociliated cell,oocyte cortex,ooplasm,post-anal gut,posterior foregut,posterior hindgut endoderm,proximal stomach,pulmonary epithelium,pyloric sphincter,pylorus,rectum,ring structure,second pancreatic bud,stomach,stomach body,stomach epithelium,subcortical cytoplasm,tracheoesophageal fold,tracheoesophageal septum,transient tracheoesophageal septum,upper blastopore lip,vegetal cortex,ventral foregut,ventral posterior hindgut endoderm,wedge region,yolk platelet,anterior endoderm,anterior hindgut endoderm,archenteron,bile duct,biliary tree,blastopore,buccopharyngeal membrane,central endoderm,cloacal sphincter,dorsal endoderm,dorsal pancreatic bud,dorsal posterior hindgut endoderm,egg,first pancreatic bud,foregut,foregut endoderm,foregut epithelium,gall bladder,gall bladder primordium,head endoderm,hepato-pancreatic duct,hepato-pancreatic progenitor cell,hindgut,hindgut endoderm,hindgut primordium,hypochord,islets of Langerhans,large intestine,left-right organizer,liver,liver diverticulum,liver parenchyme,liver primordium,lung,lung bud,lung primordium,midgut,midgut primordium,oocyte,oral evagination,pancreas,pharyngeal cavity,pharyngeal endoderm,pharyngeal pouch,polar body,posterior endoderm,posterior hindgut endoderm,primary oogonium,primary spermatogonium,primordial germ cell,proctodeum,pyloric sphincter,second pancreatic bud,secondary oogonium,secondary spermatogonium,small intestine,spermatid,spermatocyte,spermatozoon,stomach,stomach epithelium,sub-blastoporal endoderm,suprablastoporal endoderm,taste bud,thyroid,thyroid primordium,urostyle,ventral endoderm,ventral pancreatic bud,ventral posterior hindgut endoderm,visceral pouch

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Expression summary for cdx2

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Experiment	Species	Images	Stages	Anatomy	Assay
AxelDB CNRS UMR 8080	laevis	1 image	NF stage 29 and 30	endoderm, post-anal gut	in situ hybridization
Reece-Hoyes JS et al. (2002) Assay Paper	tropicalis	1 image	NF stage 40 to NF stage 42	hindgut, midgut	in situ hybridization
Illes JC et al. (2009) Assay Paper	tropicalis	1 image	NF stage 29 and 30	endoderm, hindgut	in situ hybridization
Regional gene expression in the epithelia of the Xenopus tadpole gut. Paper	xenopus	1 image	NF stage 41	hindgut, midgut, small intestine	in situ hybridization
Regional gene expression in the epithelia of the Xenopus tadpole gut. Paper	laevis	1 image	NF stage 46 to NF stage 47	large intestine, small intestine	in situ hybridization
Crossveinless-2 Is a BMP feedback inhibitor that binds Chordin/BMP to regulate Xenopus embryonic patterning. Paper	laevis	1 image	NF stage 41	endoderm	in situ hybridization
Hino J et al. (2003) Assay Paper	laevis	1 image	NF stage 28	post-anal gut	in situ hybridization
Branford WW and Yost HJ (2002) Assay Paper	laevis	1 image	NF stage 26 to NF stage 27	endoderm, post-anal gut	in situ hybridization
Genomic integration of Wnt/β-catenin and BMP/Smad1 signaling coordinates foregut and hindgut transcriptional programs. Paper	laevis	1 image	NF stage 20	endoderm, hindgut	in situ hybridization
Genomic integration of Wnt/β-catenin and BMP/Smad1 signaling coordinates foregut and hindgut transcriptional programs. Paper	laevis	1 image	NF stage 20	endoderm, hindgut	in situ hybridization
Timing is everything: Reiterative Wnt, BMP and RA signaling regulate developmental competence during endoderm organogenesis. Paper	laevis	1 image	NF stage 37 and 38	endoderm, hindgut, midgut	in situ hybridization
Blumberg_Cho dorsal blastopore lip Unigene laevis cDNA library Xenopus IMAGE cDNA Library	laevis		NF stage 7 to NF stage 9	upper blastopore lip	cDNA Library

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