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Search Criteria

Gene/Clone	Species	Stage	Anatomy Item	Experimenter
crx	xenopus		pre-chordal neural plate [+] anterior neural fold,optic field,pre-chordal neural plate border,Muller cell,accessory olfactory bulb,adenohypophysis,amacrine cell,amygdala,anterior amygdala,anterior commissure,anterior entopeduncular nucleus,anterior entopeduncular region,anterior hypothalamus,anterior tectum,anterior thalamic nucleus,anterodorsal tegmental nucleus,anteroventral tegmental nucleus,basal forebrain,basal ganglion,bed nucleus of the stria terminalis,bipolar neuron,caudal tuberal region,cell body layer of the optic tectum,central amygdala,central nucleus of the thalamus,central retina,choroid,choroid fissure,ciliary body,ciliary marginal zone,conjunctiva,cornea,diencephalon,dorsal habenular nucleus,dorsal pallidum,dorsal pallium,dorsal septum,dorsal tegmentum,dorsal telencephalon,dorsal thalamus,eminentia thalami,external plexiform layer of the olfactory bulb,eye photoreceptor cell,globe,glomerular layer of the olfactory bulb,granule cell,granule cell layer of the olfactory bulb,habenula,horizontal cell,hypophysis,hypothalamus,infundibulum,inner limiting membrane,iris,lateral amygdala,lateral forebrain bundle,lateral ganglionic eminence,lateral hypothalamic nucleus,lateral pallium,lateral septum,laterodorsal tegmental nucleus,lens,lens epithelium,lens fiber cell mass,lens placode,lens transitional zone,lower eyelid,magnocellular preoptic nucleus,mammilary region,medial amygdala,medial ganglionic eminence,medial pallium,medial septum,melanotrope,mesencephalic artery,mesencephalic vein,midbrain tegmentum,mitral cell,mitral cell layer of the olfactory bulb,neurohypophysis,neuropil of the optic tectum,nucleus accumbens,nucleus of the diagonal band,oculomotor motornucleus,olfactory bulb,optic chiasm,optic disc,optic fiber layer,optic nerve,optic stalk,optic tectum,optic tract,outer limiting membrane,pallidum,pallium,pars distalis,pars intermedia,pars nervosa,peripheral retina,photoreceptor layer,pigment layer,pineal gland,posterior commissure,posterior hypothalamus,posterior tectum,posterodorsal tegmental nucleus,posteroventral tegmental nucleus,preoptic area,pretectum,prethalamus,prethalamus basal plate,prosomere,prosomere 4,prosomere 5,prosomere 6,pupil,radial glial cell,retina,retinal ganglion cell,retinal ganglion cell layer,retinal inner nuclear layer,retinal inner plexiform layer,retinal layer,retinal neural layer,retinal outer nuclear layer,retinal outer plexiform layer,retinal pigmented epithelium,retinal progenitor cell,retinal progenitor cell region,retinal stem cell,retinal stem cell region,retromammillary area,rostral tuberal region,sclera,striatum,subcommissural organ,subpallium,subthalamic nucleus,suprachiasmatic nucleus,supraoptoparaventricular region,telencephalon,telencephalon septum,thalamus,third ventricle,torus semicircularis,trochlear motornucleus,tuberal region,ventral habenular nucleus,ventral hypothalamic nucleus,ventral pallidum,ventral pallium,ventral septum,ventral tegmentum,ventricular layer of the optic tectum,ventrolateral thalamic nucleus,ventromedial thalamic nucleus,zona limitans intrathalamica,anterior neural tube,choroid fissure,eye,eye primordium,forebrain,iris,midbrain,optic nerve,optic stalk,optic tectum,optic vesicle

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Expression summary for crx

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Experiment	Species	Images	Stages	Anatomy	Assay
XDB3 XDB3	laevis	1 image	NF stage 15	anterior neural fold, optic field	in situ hybridization
Fletcher RB and Harland RM (2008) Assay Paper	laevis	1 image	NF stage 18	anterior neural fold, eye primordium	in situ hybridization
Wang JC and Harris WA (2005) Assay Paper	xenopus	1 image	NF stage 32 to NF stage 41	photoreceptor layer, retina, retinal ganglion cell layer, retinal inner nuclear layer, retinal inner plexiform layer, [+] retinal neural layer, retinal outer nuclear layer, retinal outer plexiform layer	in situ hybridization
Viczian AS et al. (2003) Assay Paper	xenopus	5 images	NF stage 25 to NF stage 41	ciliary marginal zone, eye, photoreceptor layer, pineal gland, retina, [+] retinal inner nuclear layer, retinal outer nuclear layer	in situ hybridization
Dichmann DS et al. (2008) Assay Paper	laevis	1 image	NF stage 14	anterior neural fold, pre-chordal neural plate	in situ hybridization
Xotx5b, a new member of the Otx gene family, may be involved in anterior and eye development in Xenopus laevis. Paper	laevis	1 image	NF stage 13 to NF stage 20	optic field, pineal gland, pre-chordal neural plate	in situ hybridization
Xotx5b, a new member of the Otx gene family, may be involved in anterior and eye development in Xenopus laevis. Paper	laevis	1 image	NF stage 27 to NF stage 35 and 36	ciliary marginal zone, eye, pineal gland, retina	in situ hybridization
A novel function for Hedgehog signalling in retinal pigment epithelium differentiation. Paper	laevis	1 image	NF stage 37 and 38	eye, lens, photoreceptor layer, retina, retinal outer plexiform layer, [+] retinal pigmented epithelium	in situ hybridization
XOtx5b and XOtx2 regulate photoreceptor and bipolar fates in the Xenopus retina. Paper	laevis	1 image	NF stage 41	eye, retina, retinal inner nuclear layer, retinal outer nuclear layer	in situ hybridization
XOtx5b and XOtx2 regulate photoreceptor and bipolar fates in the Xenopus retina. Paper	laevis	1 image	NF stage 29 and 30	pineal gland, retina	in situ hybridization
Dicer inactivation causes heterochronic retinogenesis in Xenopus laevis.	laevis	1 image	NF stage 37 and 38 to NF stage 42	retina, retinal outer nuclear layer	immunohistochemistry
Dicer inactivation causes heterochronic retinogenesis in Xenopus laevis. Paper	laevis	1 image	NF stage 33 and 34 to NF stage 42	retina, retinal neural layer	in situ hybridization
Dicer inactivation causes heterochronic retinogenesis in Xenopus laevis.	laevis	1 image	NF stage 37 and 38	retina, retinal outer nuclear layer	immunohistochemistry
Xotx5b, a new member of the Otx gene family, may be involved in anterior and eye development in Xenopus laevis. Paper	laevis	1 image	NF stage 21 to NF stage 22	optic field	in situ hybridization
Chen JA et al. (2005) Assay Paper	tropicalis	1 image	NF stage 29 and 30	eye, pineal gland	in situ hybridization
Dystroglycan is required for proper retinal layering. Paper	laevis	1 image	NF stage 45	bipolar neuron, eye, eye photoreceptor cell, photoreceptor layer, retina, [+] retinal outer nuclear layer	in situ hybridization
Timing the generation of distinct retinal cells by homeobox proteins. Paper	laevis	2 images	NF stage 33 and 34 to NF stage 42	retina, retinal neural layer, retinal outer nuclear layer	immunohistochemistry
Timing the generation of distinct retinal cells by homeobox proteins. Paper	laevis	2 images	NF stage 33 and 34 to NF stage 42	retina, retinal neural layer, retinal outer nuclear layer	in situ hybridization

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