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Search Criteria

Gene/Clone	Species	Stage	Anatomy Item	Experimenter
lhx1	xenopus		pre-chordal neural plate [+] anterior neural fold,optic field,pre-chordal neural plate border,Muller cell,accessory olfactory bulb,adenohypophysis,amacrine cell,amygdala,anterior amygdala,anterior commissure,anterior entopeduncular nucleus,anterior entopeduncular region,anterior hypothalamus,anterior tectum,anterior thalamic nucleus,anterodorsal tegmental nucleus,anteroventral tegmental nucleus,basal forebrain,basal ganglion,bed nucleus of the stria terminalis,bipolar neuron,caudal tuberal region,cell body layer of the optic tectum,central amygdala,central nucleus of the thalamus,central retina,choroid,choroid fissure,ciliary body,ciliary marginal zone,conjunctiva,cornea,diencephalon,dorsal habenular nucleus,dorsal pallidum,dorsal pallium,dorsal septum,dorsal tegmentum,dorsal telencephalon,dorsal thalamus,eminentia thalami,external plexiform layer of the olfactory bulb,eye photoreceptor cell,globe,glomerular layer of the olfactory bulb,granule cell,granule cell layer of the olfactory bulb,habenula,horizontal cell,hypophysis,hypothalamus,infundibulum,inner limiting membrane,iris,lateral amygdala,lateral forebrain bundle,lateral ganglionic eminence,lateral hypothalamic nucleus,lateral pallium,lateral septum,laterodorsal tegmental nucleus,lens,lens epithelium,lens fiber cell mass,lens placode,lens transitional zone,lower eyelid,magnocellular preoptic nucleus,mammilary region,medial amygdala,medial ganglionic eminence,medial pallium,medial septum,melanotrope,mesencephalic artery,mesencephalic vein,midbrain tegmentum,mitral cell,mitral cell layer of the olfactory bulb,neurohypophysis,neuropil of the optic tectum,nucleus accumbens,nucleus of the diagonal band,oculomotor motornucleus,olfactory bulb,optic chiasm,optic disc,optic fiber layer,optic nerve,optic stalk,optic tectum,optic tract,outer limiting membrane,pallidum,pallium,pars distalis,pars intermedia,pars nervosa,peripheral retina,photoreceptor layer,pigment layer,pineal gland,posterior commissure,posterior hypothalamus,posterior tectum,posterodorsal tegmental nucleus,posteroventral tegmental nucleus,preoptic area,pretectum,prethalamus,prethalamus basal plate,prosomere,prosomere 4,prosomere 5,prosomere 6,pupil,radial glial cell,retina,retinal ganglion cell,retinal ganglion cell layer,retinal inner nuclear layer,retinal inner plexiform layer,retinal layer,retinal neural layer,retinal outer nuclear layer,retinal outer plexiform layer,retinal pigmented epithelium,retinal progenitor cell,retinal progenitor cell region,retinal stem cell,retinal stem cell region,retromammillary area,rostral tuberal region,sclera,striatum,subcommissural organ,subpallium,subthalamic nucleus,suprachiasmatic nucleus,supraoptoparaventricular region,telencephalon,telencephalon septum,thalamus,third ventricle,torus semicircularis,trochlear motornucleus,tuberal region,ventral habenular nucleus,ventral hypothalamic nucleus,ventral pallidum,ventral pallium,ventral septum,ventral tegmentum,ventricular layer of the optic tectum,ventrolateral thalamic nucleus,ventromedial thalamic nucleus,zona limitans intrathalamica,anterior neural tube,choroid fissure,eye,eye primordium,forebrain,iris,midbrain,optic nerve,optic stalk,optic tectum,optic vesicle

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Expression summary for lhx1

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Experiment	Species	Images	Stages	Anatomy	Assay
Vize Lab Assay Vize Lab	laevis	1 image	NF stage 18	pre-chordal neural plate	in situ hybridization
Vize Lab Assay Vize Lab	laevis	1 image	NF stage 33 and 34	eye	in situ hybridization
Carroll T et al. (1999) Assay Paper	laevis	1 image	NF stage 35 and 36	anterior neural tube, optic vesicle	in situ hybridization
Seville RA et al. (2002) Assay Paper	laevis	1 image	NF stage 27	anterior neural tube	in situ hybridization
Harland Lab Assay Harland Lab	tropicalis	2 images	NF stage 24 to NF stage 46	anterior neural fold, anterior neural tube, midbrain	in situ hybridization
Smith TGas028k15 Assay Smith Lab	tropicalis	2 images	NF stage 16 to NF stage 40	anterior neural fold, midbrain, pre-chordal neural plate	in situ hybridization
Neural crest migration requires the activity of the extracellular sulphatases XtSulf1 and XtSulf2. Paper	tropicalis	1 image	NF stage 28	anterior neural tube	in situ hybridization
Clone: pXH32-3 derived probe in situ hybridization European Xenopus Resource Centre (EXRC)	laevis	3 images	NF stage 16 to NF stage 46	anterior neural fold, eye, midbrain, pre-chordal neural plate	in situ hybridization
Synergism between Pax-8 and lim-1 in embryonic kidney development. Paper	laevis	1 image	NF stage 23	anterior neural tube	in situ hybridization
Analysis of the developing Xenopus tail bud reveals separate phases of gene expression during determination and outgrowth. Paper	laevis	1 image	NF stage 15 to NF stage 29 and 30	midbrain	in situ hybridization
Beck CW and Slack JM (1998) Assay Paper	laevis	1 image	NF stage 15 to NF stage 29 and 30	forebrain, midbrain	in situ hybridization
Li DH et al. (2005) Assay Paper	laevis	1 image	NF stage 29 and 30	midbrain	in situ hybridization
Kam RK et al. (2013) Assay Paper	laevis	1 image	NF stage 35 and 36	midbrain	in situ hybridization
LIM-homeodomain genes as developmental and adult genetic markers of Xenopus forebrain functional subdivisions. Paper	laevis	1 image	adult frog stage	bed nucleus of the stria terminalis, forebrain, mammilary region, medial septum, pretectum, [+] telencephalon septum, thalamus, ventral septum, ventrolateral thalamic nucleus, ventromedial thalamic nucleus	in situ hybridization
LIM-homeodomain genes as developmental and adult genetic markers of Xenopus forebrain functional subdivisions. Paper	laevis	1 image	NF stage 42 to NF stage 46	amygdala, diencephalon, medial amygdala, optic tectum, prosomere, [+] prosomere 4, zona limitans intrathalamica	in situ hybridization
LIM-homeodomain genes as developmental and adult genetic markers of Xenopus forebrain functional subdivisions. Paper	laevis	1 image	NF stage 66	optic tectum, thalamus	in situ hybridization
Expression of the LIM class homeobox gene Xlim-1 in pronephros and CNS cell lineages of Xenopus embryos is affected by retin... Paper	laevis	1 image	NF stage 22 to NF stage 28	midbrain	in situ hybridization
Taira M et al. (1994) Assay Paper	laevis	1 image	NF stage 33 and 34	forebrain, midbrain	in situ hybridization
Soeren S Lienkamp	laevis	1 image	NF stage 33 and 34	eye	in situ hybridization
LIM-homeodomain genes as developmental and adult genetic markers of Xenopus forebrain functional subdivisions. Paper	laevis	1 image	adult frog stage	anterior commissure, bed nucleus of the stria terminalis, central nucleus of the thalamus, forebrain, lateral hypothalamic nucleus, [+] lateral septum, mammilary region, medial septum, preoptic area, pretectum, suprachiasmatic nucleus, telencephalon septum, ventral septum, ventrolateral thalamic nucleus, ventromedial thalamic nucleus	in situ hybridization
LIM-homeodomain genes as developmental and adult genetic markers of Xenopus forebrain functional subdivisions. Paper	laevis	1 image	adult frog stage	amygdala, anterior thalamic nucleus, bed nucleus of the stria terminalis, central nucleus of the thalamus, diencephalon, [+] forebrain, lateral septum, mammilary region, medial amygdala, medial septum, preoptic area, pretectum, retromammillary area, suprachiasmatic nucleus, telencephalon septum, thalamus, ventral septum, ventrolateral thalamic nucleus, ventromedial thalamic nucleus	in situ hybridization

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