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Search Criteria

Gene/Clone	Species	Stage	Anatomy Item	Experimenter
nodal3.1	xenopus		dorsal marginal zone [+] anterior notochord,flexural organ,notochordal sheath,perichordal tissue,posterior notochord,prechordal plate,vacuolated notochordal tissue,axial mesoderm,elastica externa,flexural organ,notochord,notochordal epithelium,presumptive axial mesoderm

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Expression summary for nodal3.1

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Experiment	Species	Images	Stages	Anatomy	Assay
Khokha MK et al. (2005) Assay Paper	tropicalis	2 images	NF stage 8 to NF stage 10.5	dorsal marginal zone	in situ hybridization
Fletcher RB and Harland RM (2008) Assay Paper	laevis	1 image	NF stage 10	dorsal marginal zone	in situ hybridization
Hikasa H and Sokol SY (2004) Assay Paper	xenopus	1 image	NF stage 10.5	dorsal marginal zone	in situ hybridization
Freeman SD et al. (2008) Assay Paper	laevis	1 image	NF stage 10	dorsal marginal zone	in situ hybridization
Cuykendall TN and Houston DW (2009) Assay Paper	laevis	1 image	NF stage 10.5	dorsal marginal zone	in situ hybridization
Distinct PAR-1 proteins function in different branches of Wnt signaling during vertebrate development. Paper	laevis	1 image	NF stage 10.5	dorsal marginal zone	in situ hybridization
Distinct PAR-1 proteins function in different branches of Wnt signaling during vertebrate development. Paper	laevis	1 image	NF stage 10.5 to NF stage 11	dorsal marginal zone	in situ hybridization
HEB and E2A function as SMAD/FOXH1 cofactors. Paper	xenopus	1 image	NF stage 9	dorsal marginal zone	in situ hybridization
Lef1 plays a role in patterning the mesoderm and ectoderm in Xenopus tropicalis. Paper	tropicalis	1 image	NF stage 10.5	dorsal marginal zone	in situ hybridization
The dual regulator Sufu integrates Hedgehog and Wnt signals in the early Xenopus embryo. Paper	laevis	1 image	NF stage 10	dorsal marginal zone	in situ hybridization
The involvement of Frodo in TCF-dependent signaling and neural tissue development. Xenbase Image	laevis	1 image	NF stage 10.5	dorsal marginal zone	in situ hybridization
Tiki1 is required for head formation via Wnt cleavage-oxidation and inactivation. Paper	laevis	1 image	NF stage 10.5 to NF stage 11	dorsal marginal zone	in situ hybridization
Xenbase User Curated Experiment	laevis	1 image	NF stage 9	dorsal marginal zone	in situ hybridization
The Toll/IL-1 receptor binding protein MyD88 is required for Xenopus axis formation. Paper	laevis	1 image	NF stage 10.5	axial mesoderm	in situ hybridization
Serotonin signaling is required for Wnt-dependent GRP specification and leftward flow in Xenopus. Paper	laevis	1 image	NF stage 9	dorsal marginal zone	in situ hybridization
Maternal xNorrin, a canonical Wnt signaling agonist and TGF-β antagonist, controls early neuroectoderm specification in Xeno... Paper	laevis	1 image	NF stage 9 to NF stage 10	dorsal marginal zone	in situ hybridization
A tight control over Wnt action. Paper	laevis	1 image	NF stage 9	dorsal marginal zone	in situ hybridization
Xenopus tropicalis nodal-related gene 3 regulates BMP signaling: an essential role for the pro-region. Paper	laevis	1 image	NF stage 9 to NF stage 11	dorsal marginal zone	in situ hybridization
Sulf1 has ligand-dependent effects on canonical and non-canonical Wnt signalling. Paper	laevis	1 image	NF stage 10	dorsal marginal zone	in situ hybridization
Komiya Y et al. (2014) Assay Paper	laevis	1 image	NF stage 10.5	dorsal marginal zone	in situ hybridization
Liao G et al. (2006) Assay Paper	laevis	1 image	NF stage 10 to NF stage 10.5	dorsal marginal zone	in situ hybridization
Nicetto D et al. (2013) Assay Paper	laevis	1 image	NF stage 10.5	dorsal marginal zone	in situ hybridization
Brg1 chromatin remodeling ATPase balances germ layer patterning by amplifying the transcriptional burst at midblastula trans... Paper	laevis	1 image	NF stage 9	dorsal marginal zone	in situ hybridization
Brg1 chromatin remodeling ATPase balances germ layer patterning by amplifying the transcriptional burst at midblastula trans... Paper	laevis	1 image	NF stage 11	dorsal marginal zone	in situ hybridization
Kulkarni SS and Khokha MK (2018) Assay Paper	tropicalis	1 image	NF stage 10 to NF stage 11	dorsal marginal zone	in situ hybridization
Vick P et al. (2018) Assay Paper	laevis	1 image	NF stage 10.5	dorsal marginal zone	in situ hybridization
TMEM79/MATTRIN defines a pathway for Frizzled regulation and is required for Xenopus embryogenesis. Paper	laevis	1 image	NF stage 10.5 to NF stage 11	dorsal marginal zone	in situ hybridization
Sempou E et al. (2022) Assay Paper	tropicalis	1 image	NF stage 10	dorsal marginal zone	in situ hybridization
Rab7 is required for mesoderm patterning and gastrulation in Xenopus. Paper	laevis	1 image	NF stage 10.5	dorsal marginal zone	in situ hybridization

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