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Search Criteria

Gene/Clone	Species	Stage	Anatomy Item	Experimenter
nodal3.1	xenopus		vegetal yolk mass [+] blastopore lip,upper blastopore lip,lower blastopore lip,blastopore,peripheral vegetal yolk mass,central vegetal yolk mass,blastopore lip,involuted dorsal mesoderm,involuted ventral mesoderm,lower blastopore lip,upper blastopore lip,archenteron floor,blastopore,circumblastoporal collar,cloacal sphincter,proctodeum

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Expression summary for nodal3.1

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Experiment	Species	Images	Stages	Anatomy	Assay
Khokha MK et al. (2005) Assay Paper	tropicalis	2 images	NF stage 10.5 to NF stage 11	involuted dorsal mesoderm, upper blastopore lip	in situ hybridization
Fletcher RB and Harland RM (2008) Assay Paper	laevis	1 image	NF stage 10	upper blastopore lip	in situ hybridization
Freeman SD et al. (2008) Assay Paper	laevis	1 image	NF stage 10	upper blastopore lip	in situ hybridization
Hex acts with beta-catenin to regulate anteroposterior patterning via a Groucho-related co-repressor and Nodal. Paper	laevis	1 image	NF stage 10.5	involuted dorsal mesoderm	in situ hybridization
Lefty-dependent inhibition of Nodal- and Wnt-responsive organizer gene expression is essential for normal gastrulation. Paper	xenopus	1 image	NF stage 10.25 to NF stage 10.5	upper blastopore lip	in situ hybridization
HEB and E2A function as SMAD/FOXH1 cofactors. Paper	xenopus	1 image	NF stage 9	upper blastopore lip	in situ hybridization
Lef1 plays a role in patterning the mesoderm and ectoderm in Xenopus tropicalis. Paper	tropicalis	1 image	NF stage 10.5	upper blastopore lip	in situ hybridization
The involvement of Frodo in TCF-dependent signaling and neural tissue development. Xenbase Image	laevis	1 image	NF stage 10.5	upper blastopore lip	in situ hybridization
NEDD4L regulates convergent extension movements in Xenopus embryos via Disheveled-mediated non-canonical Wnt signaling. Paper	laevis	1 image	NF stage 10.5	upper blastopore lip	in situ hybridization
Xenopus tropicalis nodal-related gene 3 regulates BMP signaling: an essential role for the pro-region. Paper	laevis	1 image	NF stage 9 to NF stage 11	upper blastopore lip	in situ hybridization
Sulf1 has ligand-dependent effects on canonical and non-canonical Wnt signalling. Paper	laevis	1 image	NF stage 10	upper blastopore lip	in situ hybridization
Komiya Y et al. (2014) Assay Paper	laevis	1 image	NF stage 10.5	involuted dorsal mesoderm, upper blastopore lip	in situ hybridization
Liao G et al. (2006) Assay Paper	laevis	1 image	NF stage 10 to NF stage 10.5	upper blastopore lip	in situ hybridization
Kdm2a/b Lysine Demethylases Regulate Canonical Wnt Signaling by Modulating the Stability of Nuclear β-Catenin. Paper	laevis	2 images	NF stage 10.5	involuted dorsal mesoderm	in situ hybridization
Acosta H et al. (2015) Assay Paper	laevis	1 image	NF stage 10.5	involuted dorsal mesoderm	in situ hybridization
NF2/Merlin is required for the axial pattern formation in the Xenopus laevis embryo. Paper	laevis	1 image	NF stage 10.5	involuted dorsal mesoderm, upper blastopore lip	in situ hybridization
Identification of new regulators of embryonic patterning and morphogenesis in Xenopus gastrulae by RNA sequencing. Paper	tropicalis	1 image	NF stage 10.5	upper blastopore lip	in situ hybridization
Zhang X et al. (2015) Assay Paper	laevis	1 image	NF stage 11	upper blastopore lip	in situ hybridization
Nodal signaling in Xenopus gastrulae is cell-autonomous and patterned by beta-catenin. Paper	laevis	1 image	NF stage 11	upper blastopore lip	in situ hybridization
Kulkarni SS and Khokha MK (2018) Assay Paper	tropicalis	1 image	NF stage 10 to NF stage 11	upper blastopore lip	in situ hybridization
Vick P et al. (2018) Assay Paper	laevis	1 image	NF stage 10.5	upper blastopore lip	in situ hybridization
Mukherjee S et al. (2020) Assay Paper	tropicalis	1 image	NF stage 10.5	upper blastopore lip	in situ hybridization
TMEM79/MATTRIN defines a pathway for Frizzled regulation and is required for Xenopus embryogenesis. Paper	laevis	1 image	NF stage 10.5 to NF stage 11	upper blastopore lip	in situ hybridization
Blumberg_Cho dorsal blastopore lip Unigene laevis cDNA library Xenopus IMAGE cDNA Library	laevis		NF stage 7 to NF stage 9	upper blastopore lip	cDNA Library

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