???searchGeneExpressionSource.title???

Search Criteria

Gene/Clone	Species	Stage	Anatomy Item	Experimenter
shh	xenopus		central nervous system [+] lower eyelid,lens,retina,brain,forebrain,telencephalon,diencephalon,midbrain,hindbrain,midbrain-hindbrain boundary,hypophysis,spinal cord,ventricular zone,roof plate,ciliary marginal zone,chordoneural hinge,posterior wall of neurenteric canal,pineal gland,eye,cornea,globe,conjunctiva,sclera,iris,ciliary body,optic nerve,lens placode,posterior neural tube,pupil,floor plate,anterior neural tube,choroid fissure,optic stalk,cerebellum,fourth ventricle,medulla oblongata,neural tube,photoreceptor layer,retinal neural layer,retinal pigmented epithelium,retinal outer plexiform layer,retinal outer nuclear layer,optic fiber layer,retinal inner nuclear layer,inner limiting membrane,retinal ganglion cell layer,outer limiting membrane,retinal inner plexiform layer,optic tectum,hypothalamus,optic chiasm,suprachiasmatic nucleus,rhombomere,presumptive midbrain-hindbrain boundary,lens epithelium,lens transitional zone,lens fiber cell mass,horizontal cell,bipolar neuron,amacrine cell,retinal ganglion cell,optic tract,eye photoreceptor cell,rhombic lip,metencephalic artery,metencephalic vein,mesencephalic artery,mesencephalic vein,olfactory bulb,infundibulum,ventral tegmentum,dorsal tegmentum,anterior hypothalamus,posterior hypothalamus,lateral ganglionic eminence,subpallium,medial ganglionic eminence,midbrain tegmentum,eminentia thalami,pallium,pretectum,prethalamus,zona limitans intrathalamica,thalamus,retinal stem cell region,retinal progenitor cell region,oculomotor motornucleus,dorsal thalamus,trochlear motornucleus,central retina,peripheral retina,choroid,retinal stem cell,retinal progenitor cell,anterior tectum,posterior tectum,accessory olfactory bulb,amygdala,anterior amygdala,anterior commissure,anterior entopeduncular nucleus,ventral funiculus,anterior thalamic nucleus,anterodorsal tegmental nucleus,anteroventral tegmental nucleus,basal forebrain,basal ganglion,bed nucleus of the stria terminalis,central amygdala,central canal,central nucleus of the thalamus,dorsal column nucleus,dorsal habenular nucleus,dorsal pallidum,dorsal pallium,dorsal septum,external plexiform layer of the olfactory bulb,glomerular layer of the olfactory bulb,granule cell,granule cell layer of the cerebellum,granule cell layer of the olfactory bulb,habenula,isthmic nucleus,lateral amygdala,lateral forebrain bundle,lateral funiculus,lateral hypothalamic nucleus,lateral pallium,lateral septum,laterodorsal tegmental nucleus,locus coeruleus,magnocellular preoptic nucleus,medial amygdala,medial pallium,medial septum,mitral cell,mitral cell layer of the olfactory bulb,nucleus accumbens,nucleus of the diagonal band,pallidum,posterior commissure,dorsal funiculus,posterodorsal tegmental nucleus,posteroventral tegmental nucleus,preoptic area,raphe nucleus,telencephalon septum,solitary tract,striatum,subcommissural organ,subthalamic nucleus,torus semicircularis,ventral habenular nucleus,ventral hypothalamic nucleus,ventral pallidum,ventral pallium,ventrolateral thalamic nucleus,ventromedial thalamic nucleus,neuromere,prosomere,prosomere 4,prosomere 5,prosomere 6,brain ventricle,mammilary region,tuberal region,third ventricle,neural nucleus,ventrolateral neural tube,dorsolateral neural tube,Muller cell,spinal neuron,forebrain-midbrain boundary,ventricular layer of the optic tectum,neuropil of the optic tectum,cell body layer of the optic tectum,radial glial cell,neural stem cell,Mauthner cell,caudal tuberal region,rostral tuberal region,nucleus of the solitary tract,prethalamus basal plate,retromammillary area,nucleus reticularis medialis,nucleus reticularis superior,nucleus reticularis inferior,ventral septum,supraoptoparaventricular region,stria terminalis,optic disc,sulcus limitans of neural tube,anterior entopeduncular region,astrocyte,oligodendrocyte,astrocyte end-foot,melanotrope,adenohypophysis,neurohypophysis,pars distalis,pars nervosa,pars intermedia,dorsal telencephalon,neurenteric canal,pial cell,pia mater,cerebrospinal fluid,Mauthner cell,accessory olfactory bulb,adenohypophysis,amygdala,anterior amygdala,anterior commissure,anterior entopeduncular nucleus,anterior entopeduncular region,anterior hypothalamus,anterior tectum,anterior thalamic nucleus,anterodorsal tegmental nucleus,anteroventral tegmental nucleus,astrocyte,astrocyte end-foot,basal forebrain,basal ganglion,bed nucleus of the stria terminalis,brain ventricle,caudal tuberal region,cell body layer of the optic tectum,central amygdala,central canal,central nucleus of the thalamus,cerebellum,diencephalon,dorsal column nucleus,dorsal funiculus,dorsal habenular nucleus,dorsal pallidum,dorsal pallium,dorsal septum,dorsal tegmentum,dorsal telencephalon,dorsal thalamus,eminentia thalami,external plexiform layer of the olfactory bulb,floor plate,forebrain,forebrain-midbrain boundary,fourth ventricle,glomerular layer of the olfactory bulb,granule cell,granule cell layer of the cerebellum,granule cell layer of the olfactory bulb,habenula,hindbrain,hypophysis,hypothalamus,infundibulum,isthmic nucleus,lateral amygdala,lateral forebrain bundle,lateral funiculus,lateral ganglionic eminence,lateral hypothalamic nucleus,lateral pallium,lateral septum,laterodorsal tegmental nucleus,lens epithelium,lens fiber cell mass,lens transitional zone,locus coeruleus,magnocellular preoptic nucleus,mammilary region,medial amygdala,medial ganglionic eminence,medial pallium,medial septum,medulla oblongata,melanotrope,mesencephalic artery,mesencephalic vein,metencephalic artery,metencephalic vein,midbrain,midbrain tegmentum,midbrain-hindbrain boundary,mitral cell,mitral cell layer of the olfactory bulb,neural stem cell,neurohypophysis,neuropil of the optic tectum,nucleus accumbens,nucleus of the diagonal band,nucleus of the solitary tract,nucleus reticularis inferior,nucleus reticularis medialis,nucleus reticularis superior,oculomotor motornucleus,olfactory bulb,oligodendrocyte,optic chiasm,optic stalk,optic tectum,optic tract,pallidum,pallium,pars distalis,pars intermedia,pars nervosa,pia mater,pial cell,pineal gland,posterior commissure,posterior hypothalamus,posterior tectum,posterodorsal tegmental nucleus,posteroventral tegmental nucleus,preoptic area,pretectum,prethalamus,prethalamus basal plate,prosomere,prosomere 4,prosomere 5,prosomere 6,radial glial cell,raphe nucleus,retromammillary area,rhombic lip,rhombomere,roof plate,rostral tuberal region,solitary tract,spinal neuron,stria terminalis,striatum,subcommissural organ,subpallium,subthalamic nucleus,suprachiasmatic nucleus,supraoptoparaventricular region,telencephalon,telencephalon septum,thalamus,third ventricle,torus semicircularis,trochlear motornucleus,tuberal region,ventral funiculus,ventral habenular nucleus,ventral hypothalamic nucleus,ventral pallidum,ventral pallium,ventral septum,ventral tegmentum,ventricular layer of the optic tectum,ventricular zone,ventrolateral thalamic nucleus,ventromedial thalamic nucleus,zona limitans intrathalamica,Stirnorgan,amygdala,astrocyte,astrocyte end-foot,basal forebrain,basal ganglion,brain,forebrain,hindbrain,lens,midbrain,midbrain-hindbrain boundary,neurohypophysis,nucleus of the diagonal band,oligodendrocyte,optic nerve,optic tectum,pallidum,radial glial cell,spinal cord,striatum,telencephalon septum

Too many results?Too few results?

Expression summary for shh

???pagination.result.count???

???pagination.result.page??? 1

Experiment	Species	Images	Stages	Anatomy	Assay
Khokha MK et al. (2005) Assay Paper	tropicalis	2 images	NF stage 14 to NF stage 15	floor plate	in situ hybridization
Offner N et al. (2005) Assay Paper	xenopus	1 image	NF stage 15 to NF stage 16	floor plate	in situ hybridization
Offner N et al. (2005) Assay Paper	laevis	1 image	NF stage 15 to NF stage 16	neural tube	in situ hybridization
Lupo G et al. (2005) Assay Paper	xenopus	2 images	neurula stage to NF stage 33 and 34	floor plate, spinal cord	in situ hybridization
Silva AC et al. (2003) Assay Paper	laevis	1 image	NF stage 22 to NF stage 24	neural tube	in situ hybridization
Howell M et al. (2002) Assay Paper	xenopus	1 image	NF stage 35 and 36	brain, eye	in situ hybridization
Paper	laevis	1 image	NF stage 28	floor plate	in situ hybridization
Cholesterol homeostasis in development: the role of Xenopus 7-dehydrocholesterol reductase (Xdhcr7) in neural development. Paper	laevis	1 image	NF stage 33 and 34	floor plate, neural tube	in situ hybridization
Negative regulation of Hedgehog signaling by the cholesterogenic enzyme 7-dehydrocholesterol reductase. Paper	xenopus	1 image	NF stage 13 to NF stage 35 and 36	brain, floor plate	in situ hybridization
Olfactory and lens placode formation is controlled by the hedgehog-interacting protein (Xhip) in Xenopus. Paper	laevis	1 image	NF stage 32	brain, central nervous system, diencephalon, floor plate, ventricular zone	in situ hybridization
Neuroectodermal specification and regionalization of the Spemann organizer in Xenopus. Paper	xenopus	1 image	NF stage 10 to NF stage 12.5	floor plate	in situ hybridization
R-Spondin2 is a secreted activator of Wnt/beta-catenin signaling and is required for Xenopus myogenesis. Paper	laevis	1 image	NF stage 50	brain, neural tube, thalamus, zona limitans intrathalamica	in situ hybridization
Xenbase User Curated Experiment European Xenopus Resource Centre (EXRC)	tropicalis	1 image	NF stage 32	brain, eye	in situ hybridization
Xenopus sonic hedgehog guides retinal axons along the optic tract. Paper	laevis	1 image	NF stage 32 to NF stage 37 and 38	brain, floor plate, neural tube, optic stalk	in situ hybridization
A novel function for Hedgehog signalling in retinal pigment epithelium differentiation. Paper	laevis	1 image	NF stage 41	brain, forebrain, hindbrain, midbrain, pineal gland, [+] retina	in situ hybridization
A novel function for Hedgehog signalling in retinal pigment epithelium differentiation. Paper	laevis	1 image	NF stage 33 and 34 to NF stage 42	eye, retina, retinal ganglion cell layer, retinal outer nuclear layer, retinal pigmented epithelium	in situ hybridization
The role of Xenopus dickkopf1 in prechordal plate specification and neural patterning. Paper	xenopus	1 image	NF stage 44	central nervous system, floor plate, midbrain, spinal cord, telencephalon	in situ hybridization
The Alzheimer-related gene presenilin-1 facilitates sonic hedgehog expression in Xenopus primary neurogenesis. Paper	laevis	1 image	NF stage 13 to NF stage 14	floor plate, neural tube	in situ hybridization
Suzuki M et al. (2010) Assay Paper	laevis	1 image	NF stage 15 to NF stage 16	floor plate, neural tube	in situ hybridization
Takabatake T et al. (2000) Assay Paper	laevis	2 images	NF stage 27 to NF stage 35 and 36	brain, floor plate, forebrain, spinal cord	in situ hybridization
Transmembrane voltage potential controls embryonic eye patterning in Xenopus laevis. Paper	laevis	1 image	NF stage 29 and 30	chordoneural hinge, forebrain, hindbrain, midbrain	in situ hybridization
Tet3 CXXC Domain and Dioxygenase Activity Cooperatively Regulate Key Genes for Xenopus Eye and Neural Development. Paper	laevis	1 image	NF stage 14	neural tube	in situ hybridization
Essential role of CREB family proteins during Xenopus embryogenesis. Paper	laevis	1 image	NF stage 28	brain, central nervous system, spinal cord	in situ hybridization
Rankin SA et al. (2012) Assay Paper	laevis	1 image	NF stage 33 and 34 to NF stage 35 and 36	brain, diencephalon, floor plate, forebrain, hindbrain, [+] spinal cord	in situ hybridization
Beck CW and Slack JM (1998) Assay Paper	laevis	1 image	NF stage 32	chordoneural hinge, neural tube	in situ hybridization
Distinct expression and shared activities of members of the hedgehog gene family of Xenopus laevis. Paper	laevis	1 image	NF stage 19 to NF stage 29 and 30	anterior neural tube, brain, floor plate, forebrain, hindbrain, [+] midbrain, neural tube	in situ hybridization
Multiple stage-dependent roles for histone deacetylases during amphibian embryogenesis: implications for the involvement of ... Paper	laevis	1 image	NF stage 33 and 34 to NF stage 41	brain, forebrain, spinal cord	in situ hybridization
Sulf1 influences the Shh morphogen gradient during the dorsal ventral patterning of the neural tube in Xenopus tropicalis. Paper	tropicalis	1 image	NF stage 23 to NF stage 35 and 36	floor plate, neural tube	immunohistochemistry
Sulf1 influences the Shh morphogen gradient during the dorsal ventral patterning of the neural tube in Xenopus tropicalis. Paper	tropicalis	1 image	NF stage 23 to NF stage 35 and 36	floor plate, hindbrain, midbrain, pretectum, spinal cord	in situ hybridization
Rankin SA et al. (2014) Assay Paper	laevis	1 image	NF stage 32	brain, eye	in situ hybridization
The cytoskeletal protein Zyxin inhibits Shh signaling during the CNS patterning in Xenopus laevis through interaction with t... Paper	laevis	1 image	NF stage 27	floor plate, spinal cord	in situ hybridization
Stolow MA and Shi YB (1995) Assay Paper	laevis	1 image	NF stage 32	floor plate	in situ hybridization
Early development of the neural plate: New roles for apoptosis and for one of its main effectors caspase-3. Paper	laevis	1 image	NF stage 27	brain, subpallium, zona limitans intrathalamica	in situ hybridization
Juraver-Geslin HA et al. (2014) Assay Paper	laevis	5 images	NF stage 29 and 30 to NF stage 37 and 38	basal forebrain, forebrain, zona limitans intrathalamica	in situ hybridization
Patterns of hypothalamic regionalization in amphibians and reptiles: common traits revealed by a genoarchitectonic approach.	laevis	1 image	NF stage 46	preoptic area	immunohistochemistry
Patient Lab	laevis	6 images	NF stage 10.5 to NF stage 40	brain, forebrain, spinal cord	in situ hybridization
Koide T et al. (2006) Assay Paper	laevis	2 images	NF stage 22 to NF stage 44	brain, floor plate, neural tube	in situ hybridization
Peyrot SM et al. (2011) Assay Paper	laevis	4 images	NF stage 16 to NF stage 35 and 36	floor plate, neural tube	in situ hybridization
Prepatterning and patterning of the thalamus along embryonic development of Xenopus laevis. Paper	laevis	1 image	NF stage 33 and 34 to NF stage 37 and 38	brain, diencephalon, forebrain, zona limitans intrathalamica	immunohistochemistry
Prepatterning and patterning of the thalamus along embryonic development of Xenopus laevis. Paper	laevis	1 image	NF stage 33 and 34 to NF stage 37 and 38	diencephalon, forebrain, prethalamus, roof plate, telencephalon, [+] thalamus, zona limitans intrathalamica	in situ hybridization
Juraver-Geslin HA et al. (2011) Assay Paper	laevis	1 image	NF stage 32	zona limitans intrathalamica	in situ hybridization
A Retinoic Acid-Hedgehog Cascade Coordinates Mesoderm-Inducing Signals and Endoderm Competence during Lung Specification. Paper	laevis	2 images	NF stage 29 and 30 to NF stage 35 and 36	brain, neural tube	in situ hybridization
In synergy with noggin and follistatin, Xenopus nodal-related gene induces sonic hedgehog on notochord and floor plate. Paper	laevis	1 image	NF stage 28	floor plate	in situ hybridization
Maintenance of asymmetric nodal expression in Xenopus laevis. Paper	laevis	1 image	NF stage 20	floor plate	in situ hybridization
Pitcairn E et al. (2017) Assay Paper	laevis	1 image	NF stage 29 and 30	floor plate	in situ hybridization
A novel role of the organizer gene Goosecoid as an inhibitor of Wnt/PCP-mediated convergent extension in Xenopus and mouse. Paper	laevis	1 image	NF stage 20	floor plate	in situ hybridization
Prager A et al. (2017) Assay Paper	laevis	1 image	NF stage 20	neural tube	in situ hybridization
ATP4 and ciliation in the neuroectoderm and endoderm of Xenopus embryos and tadpoles. Paper	laevis	1 image	NF stage 19	floor plate	in situ hybridization
Evolutionarily conserved Tbx5-Wnt2/2b pathway orchestrates cardiopulmonary development. Paper	laevis	2 images	NF stage 35 and 36	floor plate, spinal cord	in situ hybridization

???pagination.result.page??? 1