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Gene/Clone	Species	Stage	Anatomy Item	Experimenter
six1	xenopus		embryonic structure

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Expression summary for six1

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Experiment	Species	Images	Stages	Anatomy	Assay
Woda JM et al. (2003) Assay Paper	xenopus	1 image	NF stage 18	cranial placode	in situ hybridization
Schlosser G and Ahrens K (2004) Assay Paper	laevis	10 images	NF stage 13 to NF stage 33 and 34	epibranchial placode, lateral line placode, lens placode, neural tube, olfactory placode, [+] otic placode, prechordal plate, profundal placode, trigeminal placode	in situ hybridization
Borchers A et al. (2006) Assay Paper	xenopus	1 image	NF stage 19 to NF stage 21	eye primordium	in situ hybridization
Schlosser G et al. (2008) Assay Paper	laevis	1 image	NF stage 26	epibranchial placode	in situ hybridization
Murato Y and Hashimoto C (2009) Assay Paper	laevis	1 image	NF stage 18	neural tube, profundal placode, trigeminal placode	in situ hybridization
Xenopus Eya1 demarcates all neurogenic placodes as well as migrating hypaxial muscle precursors. Paper	laevis	1 image	NF stage 29 and 30 to NF stage 33 and 34	epibranchial placode, hypobranchial placode, lateral line placode, olfactory placode, visceral pouch	in situ hybridization
An essential role of Xenopus Foxi1a for ventral specification of the cephalic ectoderm during gastrulation. Paper	laevis	1 image	NF stage 24	olfactory placode	in situ hybridization
Molecular cloning and embryonic expression of Xenopus Six homeobox genes. Paper	laevis	4 images	NF stage 20 to NF stage 29 and 30	cranial placode, facial epibranchial placode, glossopharyngeal epibranchial placode, olfactory placode, vagal epibranchial placode	in situ hybridization
Xenopus Six1 gene is expressed in neurogenic cranial placodes and maintained in the differentiating lateral lines. Paper	laevis	1 image	NF stage 17 to NF stage 42	cranial placode, epibranchial placode, lateral line placode, olfactory placode, trigeminal placode	in situ hybridization
Differential distribution of competence for panplacodal and neural crest induction to non-neural and neural ectoderm. Paper	laevis	2 images	NF stage 22 to NF stage 26	cranial placode, epibranchial placode, stomodeal-hypophyseal primordium	in situ hybridization
Dickinson AJ and Sive HL (2009) Assay Paper	laevis	1 image	NF stage 24	optic vesicle, stomodeal-hypophyseal primordium	in situ hybridization
RIPPLY3 is a retinoic acid-inducible repressor required for setting the borders of the pre-placodal ectoderm. Paper	laevis	1 image	NF stage 32	epibranchial placode, lateral line placode, trigeminal placode	in situ hybridization
Tissues and signals involved in the induction of placodal Six1 expression in Xenopus laevis. Paper	laevis	1 image	NF stage 20 to NF stage 26	epibranchial placode, lateral line placode, olfactory placode, otic placode, paraxial mesoderm, [+] trigeminal placode	in situ hybridization
van Grunsven LA et al. (2007) Assay Paper	laevis	1 image	NF stage 13 to NF stage 21	neurogenic placode	in situ hybridization
Yes-associated protein 65 (YAP) expands neural progenitors and regulates Pax3 expression in the neural plate border zone. Paper	laevis	1 image	NF stage 24	otic placode	in situ hybridization
The F-box protein Cdc4/Fbxw7 is a novel regulator of neural crest development in Xenopus laevis. Paper	laevis	1 image	NF stage 18 to NF stage 44	lens placode, olfactory placode	in situ hybridization
The F-box protein Cdc4/Fbxw7 is a novel regulator of neural crest development in Xenopus laevis. Paper	laevis	1 image	NF stage 26 to NF stage 33 and 34	lateral line placode, olfactory placode	in situ hybridization
Dissecting the pre-placodal transcriptome to reveal presumptive direct targets of Six1 and Eya1 in cranial placodes. Paper	laevis	1 image	NF stage 17 to NF stage 28	epibranchial placode, facial epibranchial placode, glossopharyngeal epibranchial placode, olfactory placode, otic placode, [+] profundal placode, trigeminal placode, vagal epibranchial placode	in situ hybridization
Dissecting the pre-placodal transcriptome to reveal presumptive direct targets of Six1 and Eya1 in cranial placodes. Paper	laevis	1 image	NF stage 17 to NF stage 28	epibranchial placode, facial epibranchial placode, glossopharyngeal epibranchial placode, olfactory placode, profundal placode, [+] trigeminal placode, vagal epibranchial placode	in situ hybridization
Dissecting the pre-placodal transcriptome to reveal presumptive direct targets of Six1 and Eya1 in cranial placodes. Paper	laevis	1 image	NF stage 17 to NF stage 28	epibranchial placode, facial epibranchial placode, glossopharyngeal epibranchial placode, olfactory placode, profundal placode, [+] trigeminal placode, vagal epibranchial placode	in situ hybridization
Dissecting the pre-placodal transcriptome to reveal presumptive direct targets of Six1 and Eya1 in cranial placodes. Paper	laevis	1 image	NF stage 17 to NF stage 28	epibranchial placode, facial epibranchial placode, glossopharyngeal epibranchial placode, lateral line placode, olfactory placode, [+] otic placode, profundal placode, trigeminal placode, vagal epibranchial placode	in situ hybridization
Pa2G4 is a novel Six1 co-factor that is required for neural crest and otic development. Paper	laevis	1 image	NF stage 28	cranial placode, neurogenic placode	in situ hybridization
De novo mutations in SMCHD1 cause Bosma arhinia microphthalmia syndrome and abrogate nasal development. Paper	laevis	1 image	NF stage 28	olfactory placode	in situ hybridization
Adams DS et al. (2016) Assay Paper	laevis	2 images	NF stage 18 to NF stage 21	lens placode, olfactory placode, otic placode	in situ hybridization
Rao A and LaBonne C (2018) Assay Paper	laevis	1 image	NF stage 15	cranial placode	in situ hybridization
Sullivan CH et al. (2019) Assay Paper	laevis	1 image	NF stage 24 to NF stage 28	neurogenic placode	in situ hybridization
Mukherjee S et al. (2020) Assay Paper	tropicalis	1 image	NF stage 10.5	dorsal endoderm	in situ hybridization
Tavares ALP et al. (2021) Assay Paper	laevis	3 images	NF stage 16 to NF stage 33 and 34	eye primordium, facial epibranchial placode	in situ hybridization

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