|
Display additional annotations [+]
Gene |
Clone |
Species |
Stages |
Anatomy |
tnnc2
|
|
tropicalis
|
NF stage 28
|
somite
,
muscle
|
hspb1
|
|
tropicalis
|
NF stage 28
|
somite
|
actc1
|
|
tropicalis
|
NF stage 28
|
somite
,
muscle
|
krt19
|
|
tropicalis
|
NF stage 28
|
spinal cord
,
central nervous system
,
trigeminal nerve
|
ckb
|
|
tropicalis
|
NF stage 28
|
somite
|
tpi1
|
|
tropicalis
|
NF stage 28
|
somite
,
muscle
|
gpi
|
|
tropicalis
|
NF stage 28
|
somite
|
sypl2
|
|
tropicalis
|
NF stage 28
|
somite
|
myl11
|
|
tropicalis
|
NF stage 28
|
somite
,
muscle
|
myl1
|
|
tropicalis
|
NF stage 28
|
somite
,
muscle
|
hhatl
|
|
tropicalis
|
NF stage 28
|
somite
,
muscle
|
klhl41
|
|
tropicalis
|
NF stage 28
|
somite
|
tmod4
|
|
tropicalis
|
NF stage 28
|
somite
,
muscle
|
acta4
|
|
tropicalis
|
NF stage 28
|
somite
,
heart
,
muscle
|
|
|
Fig S6 – Temporal synexpression and gene ontology in Clutch A PolyA+, related to Fig 4.
(A) Sliding window gene ontology enrichment. Bottom: Heatmap of all genes (Fig 4) arranged by similarity. Middle: The location
of all transcripts factors, blue line marks the number of transcription factors per 500 gene window. Red line marks the expected
number of transcripts for any 500 gene window. Top: -log(p) chi-squared test for the association between the window position
and the transcription factor density. A region that exceeds –log(p) > 5 is considered for annotation (Supplemental Experimental
Procedures).
(B) Somite Synexpression. Examples from the somite temporal synexpresssion group. Ranks give similarity to ckb between
34-66 hpf (Supplemental Experimental Procedures). Image source given at bottom. |