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Search Criteria

Gene/Clone	Species	Stage	Anatomy Item	Experimenter
sox2	xenopus		foregut [+] liver diverticulum,stomach,gall bladder,pyloric sphincter,dorsal pancreatic bud,lung primordium,first pancreatic bud,second pancreatic bud,liver primordium,gall bladder primordium,hepato-pancreatic progenitor cell,pulmonary epithelium,ventral foregut,dorsal foregut,fundus,pylorus,antrum,posterior foregut,stomach body,anterior foregut,proximal stomach,cardia,lung bud,distal stomach,delta cell,foregut epithelium,stomach epithelium,transient tracheoesophageal septum,tracheoesophageal fold,tracheoesophageal septum,acinar cell,alpha cell,antrum,beta cell,capillary system of liver,cardia,delta cell,distal stomach,epsilon cell,esophageal epithelium,exocrine pancreas,fundus,gamma cell,hepatocyte,islets of Langerhans,liver parenchyme,proximal stomach,pulmonary epithelium,pyloric sphincter,pylorus,stomach body,tracheal epithelium,transient tracheoesophageal septum,antrum,bile duct,biliary tree,buccopharyngeal membrane,cardia,distal stomach,dorsal pancreatic bud,esophageal epithelium,esophagus,first pancreatic bud,fundus,gall bladder,gall bladder primordium,hepato-pancreatic duct,hepato-pancreatic progenitor cell,islets of Langerhans,liver,liver parenchyme,liver primordium,lung,lung bud,lung primordium,oral evagination,pancreas,pharyngeal cavity,proximal stomach,pyloric sphincter,pylorus,second pancreatic bud,stomach,stomach body,stomach epithelium,taste bud,thyroid,thyroid primordium,trachea,tracheal epithelium,tracheoesophageal fold,tracheoesophageal septum,transient tracheoesophageal septum,ventral pancreatic bud,visceral pouch

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Expression summary for sox2

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Experiment	Species	Images	Stages	Anatomy	Assay
AxelDB CNRS UMR 8080	laevis	1 image	NF stage 29 and 30	foregut	in situ hybridization
Damianitsch K et al. (2009) Assay Paper	laevis	2 images	NF stage 40	foregut, stomach	in situ hybridization
Expression of the Wnt inhibitor, sFRP5, in the gut endoderm of Xenopus. Paper	laevis	1 image	NF stage 41 to NF stage 46	esophagus, foregut, stomach	in situ hybridization
Xenopus cDNA microarray identification of genes with endodermal organ expression. Paper	laevis	1 image	NF stage 42 to NF stage 45	esophagus, stomach	in situ hybridization
The pro-BMP activity of Twisted gastrulation is independent of BMP binding. Paper	laevis	1 image	NF stage 42	foregut, visceral pouch	in situ hybridization
Regional gene expression in the epithelia of the Xenopus tadpole gut. Paper	xenopus	1 image	NF stage 41	esophagus, foregut, stomach	in situ hybridization
Expression patterns of genes encoding small GTPases Ras-dva-1 and Ras-dva-2 in the Xenopus laevis tadpoles. Paper	laevis	1 image	NF stage 42 to NF stage 46	esophagus, gall bladder, stomach	in situ hybridization
Regional gene expression in the epithelia of the Xenopus tadpole gut. Paper	laevis	1 image	NF stage 46 to NF stage 47	pancreas, stomach	in situ hybridization
Suppression of Bmp4 signaling by the zinc-finger repressors Osr1 and Osr2 is required for Wnt/β-catenin-mediated lung specif...	laevis	1 image	NF stage 33 and 34 to NF stage 42	esophagus, stomach	immunohistochemistry
Rankin SA et al. (2012) Assay Paper	laevis	1 image	NF stage 32 to NF stage 42	esophagus, stomach	immunohistochemistry
Rankin SA et al. (2012) Assay Paper	laevis	5 images	NF stage 32 to NF stage 42	esophagus, foregut, stomach	in situ hybridization
Rankin SA et al. (2014) Assay Paper	laevis	1 image	NF stage 32 to NF stage 59	esophagus, foregut, stomach	immunohistochemistry
Rankin SA et al. (2014) Assay Paper	laevis	1 image	NF stage 32 to NF stage 59	esophagus, foregut, lung primordium, trachea	in situ hybridization
A Retinoic Acid-Hedgehog Cascade Coordinates Mesoderm-Inducing Signals and Endoderm Competence during Lung Specification. Paper	laevis	1 image	NF stage 33 and 34 to NF stage 35 and 36	foregut	immunohistochemistry
A Retinoic Acid-Hedgehog Cascade Coordinates Mesoderm-Inducing Signals and Endoderm Competence during Lung Specification. Paper	laevis	1 image	NF stage 33 and 34 to NF stage 35 and 36	foregut	in situ hybridization
Genomic integration of Wnt/β-catenin and BMP/Smad1 signaling coordinates foregut and hindgut transcriptional programs. Paper	laevis	1 image	NF stage 35 and 36	foregut	in situ hybridization
Timing is everything: Reiterative Wnt, BMP and RA signaling regulate developmental competence during endoderm organogenesis. Paper	laevis	1 image	NF stage 33 and 34 to NF stage 37 and 38	dorsal foregut, esophagus	immunohistochemistry
Timing is everything: Reiterative Wnt, BMP and RA signaling regulate developmental competence during endoderm organogenesis. Paper	laevis	1 image	NF stage 33 and 34 to NF stage 37 and 38	foregut	in situ hybridization
Nasr T et al. (2019) Assay	laevis	2 images	NF stage 35 and 36 to NF stage 44	dorsal foregut, esophageal epithelium, esophagus, tracheoesophageal fold	immunohistochemistry

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