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Search Criteria

Gene/Clone	Species	Stage	Anatomy Item	Experimenter
otx2	xenopus		brain [+] forebrain,telencephalon,diencephalon,midbrain,hindbrain,midbrain-hindbrain boundary,hypophysis,ventricular zone,pineal gland,optic stalk,cerebellum,fourth ventricle,medulla oblongata,optic tectum,hypothalamus,optic chiasm,suprachiasmatic nucleus,rhombomere,optic tract,rhombic lip,metencephalic artery,metencephalic vein,mesencephalic artery,mesencephalic vein,olfactory bulb,infundibulum,ventral tegmentum,dorsal tegmentum,anterior hypothalamus,posterior hypothalamus,lateral ganglionic eminence,subpallium,medial ganglionic eminence,midbrain tegmentum,eminentia thalami,pallium,pretectum,prethalamus,zona limitans intrathalamica,thalamus,oculomotor motornucleus,dorsal thalamus,trochlear motornucleus,anterior tectum,posterior tectum,accessory olfactory bulb,amygdala,anterior amygdala,anterior commissure,anterior entopeduncular nucleus,anterior thalamic nucleus,anterodorsal tegmental nucleus,anteroventral tegmental nucleus,basal forebrain,basal ganglion,bed nucleus of the stria terminalis,central amygdala,central nucleus of the thalamus,dorsal column nucleus,dorsal habenular nucleus,dorsal pallidum,dorsal pallium,dorsal septum,external plexiform layer of the olfactory bulb,glomerular layer of the olfactory bulb,granule cell,granule cell layer of the cerebellum,granule cell layer of the olfactory bulb,habenula,isthmic nucleus,lateral amygdala,lateral forebrain bundle,lateral hypothalamic nucleus,lateral pallium,lateral septum,laterodorsal tegmental nucleus,locus coeruleus,magnocellular preoptic nucleus,medial amygdala,medial pallium,medial septum,mitral cell,mitral cell layer of the olfactory bulb,nucleus accumbens,nucleus of the diagonal band,pallidum,posterior commissure,posterodorsal tegmental nucleus,posteroventral tegmental nucleus,preoptic area,raphe nucleus,telencephalon septum,solitary tract,striatum,subcommissural organ,subthalamic nucleus,torus semicircularis,ventral habenular nucleus,ventral hypothalamic nucleus,ventral pallidum,ventral pallium,ventrolateral thalamic nucleus,ventromedial thalamic nucleus,prosomere,prosomere 4,prosomere 5,prosomere 6,brain ventricle,mammilary region,tuberal region,third ventricle,forebrain-midbrain boundary,ventricular layer of the optic tectum,neuropil of the optic tectum,cell body layer of the optic tectum,radial glial cell,neural stem cell,Mauthner cell,caudal tuberal region,rostral tuberal region,nucleus of the solitary tract,prethalamus basal plate,retromammillary area,nucleus reticularis medialis,nucleus reticularis superior,nucleus reticularis inferior,ventral septum,supraoptoparaventricular region,stria terminalis,anterior entopeduncular region,astrocyte,oligodendrocyte,astrocyte end-foot,melanotrope,adenohypophysis,neurohypophysis,pars distalis,pars nervosa,pars intermedia,dorsal telencephalon,pial cell,pia mater,amygdala,anterior amygdala,anterior entopeduncular nucleus,anterior tectum,astrocyte end-foot,basal ganglion,bed nucleus of the stria terminalis,cell body layer of the optic tectum,central amygdala,dorsal pallidum,dorsal septum,lateral amygdala,lateral septum,medial amygdala,medial septum,neuropil of the optic tectum,nucleus accumbens,nucleus of the diagonal band,pallidum,pars nervosa,posterior tectum,radial glial cell,striatum,subthalamic nucleus,telencephalon septum,ventral pallidum,ventral septum,ventricular layer of the optic tectum,Stirnorgan,amygdala,astrocyte,astrocyte end-foot,basal forebrain,basal ganglion,neurohypophysis,nucleus of the diagonal band,oligodendrocyte,optic nerve,optic tectum,pallidum,radial glial cell,striatum,telencephalon septum

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Expression summary for otx2

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Experiment	Species	Images	Stages	Anatomy	Assay
Lee SJ and Han JK (2005) Assay Paper	laevis	1 image	NF stage 25	forebrain	in situ hybridization
Scaling of dorsal-ventral patterning by embryo size-dependent degradation of Spemann''s organizer signals. Paper	laevis	1 image	NF stage 24	brain, forebrain	in situ hybridization
Silencing of Smed-betacatenin1 generates radial-like hypercephalized planarians. Paper	laevis	1 image	NF stage 26	forebrain	in situ hybridization
The lipid phosphatase LPP3 regulates extra-embryonic vasculogenesis and axis patterning. Paper	laevis	1 image	NF stage 22	forebrain	in situ hybridization
Separation of neural induction and neurulation in Xenopus. Paper	laevis	1 image	NF stage 13 to NF stage 35 and 36	midbrain	in situ hybridization
The Spemann organizer of Xenopus is patterned along its anteroposterior axis at the earliest gastrula stage. Paper	laevis	1 image	NF stage 25	forebrain	in situ hybridization
Misexpression of Polycomb-group proteins in Xenopus alters anterior neural development and represses neural target genes. Paper	laevis	1 image	NF stage 19 to NF stage 26	forebrain, midbrain	in situ hybridization
Patterning of the neural ectoderm of Xenopus laevis by the amino-terminal product of hedgehog autoproteolytic cleavage. Paper	laevis	1 image	NF stage 29 and 30	forebrain, midbrain	in situ hybridization
Xenopus mutant reveals necessity of rax for specifying the eye field which otherwise forms tissue with telencephalic and die... Paper	tropicalis	1 image	NF stage 15 to NF stage 24	brain, diencephalon	in situ hybridization
cnrip1 is a regulator of eye and neural development in Xenopus laevis. Paper	laevis	1 image	NF stage 24	brain, midbrain	in situ hybridization
Komiya Y et al. (2014) Assay Paper	laevis	1 image	NF stage 26	midbrain	in situ hybridization
Juraver-Geslin HA et al. (2014) Assay Paper	laevis	3 images	NF stage 29 and 30 to NF stage 32	diencephalon, forebrain, prosomere, telencephalon, thalamus	in situ hybridization
Cooperation of intrinsic and extrinsic signals in the elaboration of regional identity in the posterior cerebral cortex.	laevis	1 image	NF stage 33 and 34	brain, forebrain, midbrain	immunohistochemistry
Yamamoto A et al. (2005) Assay Paper	laevis	1 image	NF stage 24 to NF stage 28	forebrain	in situ hybridization
Belyaeva OV et al. (2012) Assay Paper	laevis	2 images	NF stage 14 to NF stage 20	brain, forebrain	in situ hybridization
Szenker E et al. (2012) Assay Paper	laevis	1 image	NF stage 22	diencephalon	in situ hybridization
De Marco N et al. (2011) Assay Paper	laevis	2 images	NF stage 24 to NF stage 42	diencephalon, forebrain, midbrain, telencephalon	in situ hybridization
Fredieu JR et al. (1997) Assay Paper	laevis	1 image	NF stage 32	midbrain	in situ hybridization
Zhang S et al. (2014) Assay Paper	tropicalis	1 image	NF stage 28 to NF stage 35 and 36	forebrain	in situ hybridization
Zhang S et al. (2014) Assay Paper	laevis	1 image	NF stage 28 to NF stage 35 and 36	forebrain	in situ hybridization

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