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Search Criteria

Gene/Clone	Species	Stage	Anatomy Item	Experimenter
prph	xenopus		pre-chordal neural plate [+] anterior neural fold,optic field,pre-chordal neural plate border,Muller cell,accessory olfactory bulb,adenohypophysis,amacrine cell,amygdala,anterior amygdala,anterior commissure,anterior entopeduncular nucleus,anterior entopeduncular region,anterior hypothalamus,anterior tectum,anterior thalamic nucleus,anterodorsal tegmental nucleus,anteroventral tegmental nucleus,basal forebrain,basal ganglion,bed nucleus of the stria terminalis,bipolar neuron,caudal tuberal region,cell body layer of the optic tectum,central amygdala,central nucleus of the thalamus,central retina,choroid,choroid fissure,ciliary body,ciliary marginal zone,conjunctiva,cornea,diencephalon,dorsal habenular nucleus,dorsal pallidum,dorsal pallium,dorsal septum,dorsal tegmentum,dorsal telencephalon,dorsal thalamus,eminentia thalami,external plexiform layer of the olfactory bulb,eye photoreceptor cell,globe,glomerular layer of the olfactory bulb,granule cell,granule cell layer of the olfactory bulb,habenula,horizontal cell,hypophysis,hypothalamus,infundibulum,inner limiting membrane,iris,lateral amygdala,lateral forebrain bundle,lateral ganglionic eminence,lateral hypothalamic nucleus,lateral pallium,lateral septum,laterodorsal tegmental nucleus,lens,lens epithelium,lens fiber cell mass,lens placode,lens transitional zone,lower eyelid,magnocellular preoptic nucleus,mammilary region,medial amygdala,medial ganglionic eminence,medial pallium,medial septum,melanotrope,mesencephalic artery,mesencephalic vein,midbrain tegmentum,mitral cell,mitral cell layer of the olfactory bulb,neurohypophysis,neuropil of the optic tectum,nucleus accumbens,nucleus of the diagonal band,oculomotor motornucleus,olfactory bulb,optic chiasm,optic disc,optic fiber layer,optic nerve,optic stalk,optic tectum,optic tract,outer limiting membrane,pallidum,pallium,pars distalis,pars intermedia,pars nervosa,peripheral retina,photoreceptor layer,pigment layer,pineal gland,posterior commissure,posterior hypothalamus,posterior tectum,posterodorsal tegmental nucleus,posteroventral tegmental nucleus,preoptic area,pretectum,prethalamus,prethalamus basal plate,prosomere,prosomere 4,prosomere 5,prosomere 6,pupil,radial glial cell,retina,retinal ganglion cell,retinal ganglion cell layer,retinal inner nuclear layer,retinal inner plexiform layer,retinal layer,retinal neural layer,retinal outer nuclear layer,retinal outer plexiform layer,retinal pigmented epithelium,retinal progenitor cell,retinal progenitor cell region,retinal stem cell,retinal stem cell region,retromammillary area,rostral tuberal region,sclera,striatum,subcommissural organ,subpallium,subthalamic nucleus,suprachiasmatic nucleus,supraoptoparaventricular region,telencephalon,telencephalon septum,thalamus,third ventricle,torus semicircularis,trochlear motornucleus,tuberal region,ventral habenular nucleus,ventral hypothalamic nucleus,ventral pallidum,ventral pallium,ventral septum,ventral tegmentum,ventricular layer of the optic tectum,ventrolateral thalamic nucleus,ventromedial thalamic nucleus,zona limitans intrathalamica,anterior neural tube,choroid fissure,eye,eye primordium,forebrain,iris,midbrain,optic nerve,optic stalk,optic tectum,optic vesicle

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Expression summary for prph

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Experiment	Species	Images	Stages	Anatomy	Assay
hnRNP K post-transcriptionally co-regulates multiple cytoskeletal genes needed for axonogenesis.	laevis	1 image	NF stage 37 and 38	optic nerve	immunohistochemistry
Green YS and Vetter ML (2011) Assay Paper	laevis	3 images	NF stage 23 to NF stage 28	anterior neural tube, eye, forebrain, midbrain, olfactory bulb, [+] retina	in situ hybridization
The expression of XIF3 in undifferentiated anterior neuroectoderm, but not in primary neurons, is induced by the neuralizing... Paper	laevis	1 image	NF stage 35 and 36 to NF stage 37 and 38	forebrain	in situ hybridization
Xenopus laevis peripherin (XIF3) is expressed in radial glia and proliferating neural epithelial cells as well as in neurons. Paper	laevis	1 image	NF stage 33 and 34 to NF stage 35 and 36	eye, forebrain, midbrain, retina	in situ hybridization
Microtubule-associated protein tau promotes neuronal class II β-tubulin microtubule formation and axon elongation in embryon...	laevis	1 image	NF stage 37 and 38	optic nerve	immunohistochemistry
Martinez-De Luna RI et al. (2017) Assay Paper	laevis	1 image	NF stage 50 to NF stage 52	retinal ganglion cell layer	immunohistochemistry
Martinez-De Luna RI et al. (2017) Assay Paper	laevis	1 image	NF stage 50 to NF stage 52	ciliary marginal zone, eye, peripheral retina, retina, retinal ganglion cell, [+] retinal inner plexiform layer, retinal outer plexiform layer	in situ hybridization
Xenopus laevis peripherin (XIF3) is expressed in radial glia and proliferating neural epithelial cells as well as in neurons. Paper	laevis	1 image	NF stage 18 to NF stage 22	anterior neural fold, forebrain, pre-chordal neural plate, telencephalon	in situ hybridization
Xenopus laevis peripherin (XIF3) is expressed in radial glia and proliferating neural epithelial cells as well as in neurons. Paper	laevis	1 image	NF stage 51	ciliary marginal zone, eye, retina, retinal ganglion cell, retinal ganglion cell layer, [+] retinal inner nuclear layer, retinal neural layer, retinal pigmented epithelium	in situ hybridization

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