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Search Criteria

Gene/Clone	Species	Stage	Anatomy Item	Experimenter
sox11	xenopus		central nervous system [+] bipolar neuron,conjunctiva,pineal gland,dorsal telencephalon,retinal stem cell,mesencephalic artery,oligodendrocyte,neural tube,caudal tuberal region,infundibulum,lens,amacrine cell,optic tectum,central retina,preoptic area,granule cell layer of the olfactory bulb,prosomere 4,dorsal pallidum,retinal outer plexiform layer,inner limiting membrane,mitral cell,posteroventral tegmental nucleus,lens epithelium,nucleus reticularis superior,hindbrain,rostral tuberal region,medial ganglionic eminence,brain,trochlear motornucleus,mesencephalic vein,midbrain-hindbrain boundary,rhombic lip,bed nucleus of the stria terminalis,lateral ganglionic eminence,posterodorsal tegmental nucleus,retinal neural layer,ventral funiculus,outer segment disk,eye photoreceptor cell,anterior tectum,retinal progenitor cell region,dorsal septum,Mauthner cell,lens fiber cell mass,Mueller cell,anterior amygdala,outer segment cilium,retinal ganglion cell,astrocyte end-foot,suprachiasmatic nucleus,dorsal column nucleus,chordoneural hinge,lens transitional zone,lateral septum,globe,peripheral retina,cornea,posterior hypothalamus,basal ganglion,dorsal tegmentum,anterior commissure,pial cell,neural nucleus,dorsal habenular nucleus,rhombomere,cerebellum,cerebrospinal fluid,nucleus of the diagonal band,optic tract,fourth ventricle,retinal progenitor cell,anterior neural tube,eminentia thalami,anterodorsal tegmental nucleus,third ventricle,ventrolateral thalamic nucleus,pallium,olfactory bulb,ventral pallidum,anterior entopeduncular region,nucleus reticularis inferior,striatum,central amygdala,sulcus limitans of neural tube,diencephalon,optic chiasm,subpallium,pupil,ventricular zone,pretectum,metencephalic vein,anterior thalamic nucleus,dorsolateral neural tube,lateral amygdala,neurohypophysis,basal forebrain,posterior commissure,posterior neural tube,ventral tegmentum,lateral funiculus,retinal outer nuclear layer,iris,pars nervosa,amygdala,choroid,central canal,forebrain-midbrain boundary,medial septum,medial amygdala,telencephalon,supraoptoparaventricular region,metencephalic artery,dorsal funiculus,glomerular layer of the olfactory bulb,anterior hypothalamus,torus semicircularis,astrocyte,locus coeruleus,subthalamic nucleus,medial pallium,retinal ganglion cell layer,oculomotor motornucleus,glial endfoot,spinal neuron,ventral habenular nucleus,external plexiform layer of the olfactory bulb,hypophysis,ventral septum,adenohypophysis,zona limitans intrathalamica,hypothalamus,solitary tract,telencephalon septum,ventrolateral neural tube,retinal pigmented epithelium,lower eyelid,prosomere,melanotrope,midbrain tegmentum,cell body layer of the optic tectum,pars intermedia,retromammillary area,brain ventricle,tuberal region,outer limiting membrane,retina,subcommissural organ,mitral cell layer of the olfactory bulb,lateral hypothalamic nucleus,nucleus reticularis medialis,raphe nucleus,neural stem cell,mammilary region,habenula,lateral pallium,lens placode,ciliary body,nucleus accumbens,retinal inner nuclear layer,optic stalk,anterior entopeduncular nucleus,optic disc,optic fiber layer,ventromedial thalamic nucleus,granule cell,ventral hypothalamic nucleus,choroid fissure,horizontal cell,thalamus,roof plate,prosomere 5,presumptive midbrain-hindbrain boundary,lateral forebrain bundle,optic nerve,floor plate,pars distalis,eye,ventricular layer of the optic tectum,neuropil of the optic tectum,neurenteric canal,prethalamus,accessory olfactory bulb,anteroventral tegmental nucleus,central nucleus of the thalamus,prethalamus basal plate,ciliary marginal zone,radial glial cell,nucleus of the solitary tract,prosomere 6,stria terminalis,ventral pallium,granule cell layer of the cerebellum,pia mater,magnocellular preoptic nucleus,posterior tectum,photoreceptor layer,pallidum,dorsal thalamus,posterior wall of neurenteric canal,retinal inner plexiform layer,spinal cord,retinal stem cell region,laterodorsal tegmental nucleus,isthmic nucleus,dorsal pallium,medulla oblongata,midbrain,neuromere,sclera,forebrain,nucleus of the diagonal band,astrocyte end-foot,neurohypophysis,brain,radial glial cell,Stirnorgan,midbrain,striatum,optic nerve,midbrain-hindbrain boundary,astrocyte,pallidum,spinal cord,telencephalon septum,optic tectum,forebrain,hindbrain,basal forebrain,oligodendrocyte,lens,amygdala,basal ganglion,anterior amygdala,posteroventral tegmental nucleus,solitary tract,anterior thalamic nucleus,dorsal tegmentum,dorsal funiculus,preoptic area,midbrain tegmentum,nucleus accumbens,pineal gland,granule cell layer of the cerebellum,prethalamus basal plate,metencephalic artery,midbrain,nucleus reticularis medialis,mitral cell layer of the olfactory bulb,rhombic lip,metencephalic vein,thalamus,lateral septum,hypothalamus,floor plate,retromammillary area,accessory olfactory bulb,optic tract,eminentia thalami,dorsal habenular nucleus,cell body layer of the optic tectum,subthalamic nucleus,bed nucleus of the stria terminalis,anterior entopeduncular nucleus,amygdala,posterior hypothalamus,lateral funiculus,posterior commissure,ventral pallidum,medial ganglionic eminence,fourth ventricle,lens transitional zone,external plexiform layer of the olfactory bulb,dorsal column nucleus,infundibulum,locus coeruleus,striatum,lateral hypothalamic nucleus,third ventricle,neuropil of the optic tectum,hypophysis,dorsal thalamus,prosomere 5,pial cell,astrocyte,dorsal telencephalon,cerebellum,optic stalk,olfactory bulb,granule cell,raphe nucleus,habenula,adenohypophysis,laterodorsal tegmental nucleus,stria terminalis,anterodorsal tegmental nucleus,torus semicircularis,telencephalon,central nucleus of the thalamus,dorsal septum,zona limitans intrathalamica,lens epithelium,ventral funiculus,posterodorsal tegmental nucleus,basal forebrain,anterior tectum,nucleus of the diagonal band,mesencephalic artery,central canal,astrocyte end-foot,subcommissural organ,anterior entopeduncular region,neurohypophysis,lateral forebrain bundle,melanotrope,supraoptoparaventricular region,isthmic nucleus,pretectum,dorsal pallidum,medial septum,ventricular zone,trochlear motornucleus,midbrain-hindbrain boundary,ventral tegmentum,prosomere 6,pallidum,roof plate,dorsal pallium,magnocellular preoptic nucleus,ventromedial thalamic nucleus,brain ventricle,rhombomere,ventral habenular nucleus,prosomere,oculomotor motornucleus,lateral pallium,spinal neuron,pia mater,hindbrain,oligodendrocyte,basal ganglion,anteroventral tegmental nucleus,caudal tuberal region,ventral hypothalamic nucleus,suprachiasmatic nucleus,lateral amygdala,mesencephalic vein,prethalamus,Mauthner cell,ventricular layer of the optic tectum,radial glial cell,medial pallium,ventrolateral thalamic nucleus,tuberal region,pars distalis,anterior hypothalamus,lateral ganglionic eminence,ventral septum,diencephalon,optic chiasm,nucleus reticularis superior,ventral pallium,mitral cell,nucleus reticularis inferior,pallium,posterior tectum,rostral tuberal region,telencephalon septum,granule cell layer of the olfactory bulb,optic tectum,forebrain-midbrain boundary,pars intermedia,lens fiber cell mass,neural stem cell,forebrain,pars nervosa,mammilary region,medial amygdala,prosomere 4,nucleus of the solitary tract,central amygdala,subpallium,medulla oblongata,glomerular layer of the olfactory bulb,anterior commissure

Too many results?Too few results?

Expression summary for sox11

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Experiment	Species	Images	Stages	Anatomy	Assay
Differential distribution of competence for panplacodal and neural crest induction to non-neural and neural ectoderm. Paper	laevis	1 image	NF stage 22	anterior neural tube, neural tube, posterior neural tube	in situ hybridization
Identification of neural genes using Xenopus DNA microarrays. Paper	laevis	1 image	NF stage 29 and 30	brain, eye, forebrain, hindbrain, midbrain, [+] midbrain-hindbrain boundary	in situ hybridization
Involvement of NLK and Sox11 in neural induction in Xenopus development. Paper	laevis	1 image	NF stage 20 to NF stage 35 and 36	anterior neural tube, brain, central nervous system, neural tube, posterior neural tube, [+] spinal cord	in situ hybridization
Evolutionarily conserved role for SoxC genes in neural crest specification and neuronal differentiation. Paper	laevis	1 image	NF stage 20 to NF stage 28	anterior neural tube, brain, eye, forebrain, hindbrain, [+] midbrain, neural tube, posterior neural tube	in situ hybridization
Cizelsky W et al. (2013) Assay Paper	laevis	1 image	NF stage 21 to NF stage 41	brain, central retina, chordoneural hinge, ciliary marginal zone, eye, [+] forebrain, hindbrain, neural tube, peripheral retina, retinal neural layer, spinal cord	in situ hybridization
Identification of retinal homeobox (rax) gene-dependent genes by a microarray approach: the DNA endoglycosylase neil3 is a m... Paper	laevis	1 image	NF stage 26 to NF stage 32	brain, eye, forebrain, hindbrain, midbrain	in situ hybridization
Pan Y et al. (2018) Assay Paper	laevis	1 image	NF stage 41	ciliary marginal zone, eye, retina	in situ hybridization
Sullivan CH et al. (2019) Assay Paper	laevis	1 image	NF stage 24 to NF stage 28	neural tube	in situ hybridization
Xenopus EST library Unigene laevis cDNA library	laevis		NF stage 45 to NF stage 66	brain	cDNA Library

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