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Search High Throughput Sequencing Data (RNA-Seq, ChIP-Seq, etc.)

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GSE Search Results:

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GSE Title Assay Types Article
Sample
GSE65785 Measuring Absolute RNA Copy Numbers at High Temporal Resolution Reveals Transcriptome Kinetics in Development RNA-Seq XB-ART-51804
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GSE67974 Embryonic transcription is controlled by maternally defined chromatin state RNA-Seq ChIP-Seq Bisulfite-Seq XB-ART-51677
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
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GSE68972 The identification of differentially expressed genes between animal and vegetal blastomeres in Xenopus laevis RNA-Seq XB-ART-50741
GSE69701 RNA-Seq and microarray analysis of the Xenopus inner ear transcriptome discloses orthologous OMIM® genes for hereditary disorders of hearing and balance RNA-Seq XB-ART-51592
GSE71006 Cdx ParaHox genes acquired distinct developmental roles after gene duplication in vertebrate evolution RNA-Seq XB-ART-51076
  
  
  
  
  
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GSE72657 Tissue- and stage-specific cellular context regulates Wnt target gene expression subsequent to β-catenin recruitment RNA-Seq ChIP-Seq XB-ART-52077
  
  
  
  
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GSE73419 Tissue gene expression of Xenopus laevis J strain [tissue] RNA-Seq XB-ART-52612
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GSE73430 Developmental gene expression of Xenopus laevis J strain [stage] RNA-Seq XB-ART-52612
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GSE73870 On the relationship of protein and mRNA dynamics in vertebrate embryonic development [polyA] RNA-Seq XB-ART-51556
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GSE73904 On the relationship of protein and mRNA dynamics in vertebrate embryonic development [RiboZero] RNA-Seq XB-ART-51556
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GSE74470 Transcriptomic Insights into Genetic Diversity of Protein-Coding Genes in X. laevis RNA-Seq XB-ART-53166
GSE74919 Whole transcriptome target sequencing: profiling gene expression and alternative polyadenylation with one pipeline. RNA-Seq WTTS-Seq XB-ART-52200
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GSE75164 Sperm is epigenetically programmed to regulate gene transcription in embryo RNA-Seq ChIP-Seq MBD-Seq MNase-Seq XB-ART-53997
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
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GSE75278 Genome-wide analysis of dorsal and ventral transcriptomes of the Xenopus laevis gastrula RNA-Seq XB-ART-51980
  
  
GSE76059 ChIP-sequencing in stage 10.5 Xenopus laevis embryos ChIP-Seq XB-ART-52612
  
  
  
  
  
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GSE76342 RNAseq profiling of multiciliated cells RNA-Seq XB-ART-53709
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
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GSE76915 A novel role for ASCL1 in the regulation of mesendoderm formation via HDAC-dependent antagonism of VegT function RNA-Seq XB-ART-51664
  
GSE76991 Differential expression analysis of Gcn5 knockdown embryos at early developmental stage 10.5 in Xenopus laevis RNA-Seq XB-ART-51942
  
GSE76994 Differential expression analysis of triple knockdown of TBP and TBP-related factors (TKD) in Xenopus laevis embryos at early developmental stage 10.5 RNA-Seq XB-ART-51942
  
GSE77281 RNA-seq based identification of potential RARgamma target genes in Xenopus laevis RNA-Seq
  
  
GSE77363 Genome-wide binding pattern of β-catenin during Xenopus gastrulation ChIP-Seq XB-ART-52028
  
GSE77724 Translational profiling of retinal ganglion cell optic nerve regeneration in Xenopus laevis RNA-Seq XB-ART-52302
  
  
  
  
  
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GSE78176 Histone modification and transcription factor ChIPseq of Xenopus laevis epithelial progenitors ChIP-Seq XB-ART-53709
  
  
  
  
  
  
  
  
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GSE81458 Regional expression of X. tropicalis transcription factors in early gastrula embryos RNA-Seq XB-ART-52307
  
  
  
  
  
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GSE83784 Identification of microRNAs and microRNA targets in Xenopus ectoderm RNA-Seq RIP-Seq miRNA-Seq XB-ART-52452
  
  
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GSE86382 RISC factor MOV10 is required for normal development and viability in both mouse and Xenopus RNA-Seq XB-ART-54381
  
GSE87652 Genomic integration of Wnt/b-catenin and BMP/Smad1 coordinates the transcriptional program of foregut and hindgut progenitors [ChIP-seq] ChIP-Seq XB-ART-53106
  
  
  
  
  
  
  
  
  
  
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GSE87653 Genomic integration of Wnt/b-catenin and BMP/Smad1 coordinates the transcriptional program of foregut and hindgut progenitors [RNA-seq] RNA-Seq XB-ART-53106
  
  
  
  
  
  
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GSE88975 RNA-Seq of Xenopus tail regeneration RNA-Seq XB-ART-53040
  
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GSE89271 RNAseq and ChIPseq profiling of Foxn4 and Foxj1 in multiciliated cells RNA-Seq ChIP-Seq XB-ART-52793
  
  
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GSE92366 H3K4 Methylation-Mediated Memory of an Active Transcriptional State Impairs Nuclear Reprogramming RNA-Seq ChIP-Seq XB-ART-54691
  
  
  
  
  
  
  
  
  
  
  
  
  
  
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GSE92382 Regulatory remodeling in the allo-tetraploid frog Xenopus laevis RNA-Seq ChIP-Seq XB-ART-54195
  
  
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GSE93195 Spemann organizer transcriptome induction by early β-Catenin, Wnt, Nodal and Siamois signals in Xenopus laevis RNA-Seq XB-ART-53589
  
  
  
  
  
  
  
  
  
  
  
  
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GSE96655 Innate Immune Response and Off-Target Mis-splicing Are Common Morpholino-Induced Side Effects in Xenopus RNA-Seq XB-ART-54637
  
  
  
  
  
  
  
  
  
  
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GSE97367 BioProject PRJNA381064: Convergent origination of a Drosophila-like dosage compensation mechanism in a reptile lineage RNA-Seq XB-ART-56019
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GSE102047 The Xenopus Primordial Germ Cell Transcriptome: Unexpected Role for sox7 in Early PGC Development RNA-Seq XB-ART-54309
GSE103240 A Molecular Atlas of the Developing Ectoderm Defines Neural, Neural Crest, Placode and Non-Neural Progenitor Identity in Vertebrates. RNA-Seq XB-ART-54144
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
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GSE104848 RNA-Seq analysis of localization along animal-vegetal axis of Xenopus laevis RNA-Seq XB-ART-54969
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GSE106320 Bighead is a Wnt antagonist secreted by the Xenopus Spemann organizer that promotes Lrp6 endocytosis RNA-Seq XB-ART-55302
  
  
  
  
  
  
  
  
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GSE107424 Transcriptomics of Dorso-Ventral axis determination in Xenopus tropicalis RNA-Seq XB-ART-54855
  
  
GSE111454 RNA Sequencing facilitates the identification of transcriptional targets of Pitx1 in Xenopus laevis RNA-Seq XB-ART-54672
  
GSE112364 RNAseq profiliing of Xenopus laevis animal caps expressing Xnr2 at st14 RNA-Seq XB-ART-54874
GSE112718 Retinoic acid induced expression of Hnf1β and Fzd4 is required for pancreas development in Xenopus laevis RNA-Seq XB-ART-54918
  
  
  
GSE113186 The role of maternal pioneer factors in predefining first zygotic responses to inductive signals RNA-Seq ChIP-Seq Hi-C DNase-Seq XB-ART-56302
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
  
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GSE116819 Transcriptome analysis of wild type and RAR deficient frog faces during development RNA-Seq XB-ART-55440
  
GSE117754 Critical roles of lysine demethylase Kdm3a in craniofacial and neural development during Xenopus embryogenesis RNA-Seq XB-ART-55525
  
  
GSE118024 Endodermal maternal transcription factors establish super enhancers during zygotic genome activation RNA-Seq ChIP-Seq XB-ART-55999
  
  
  
  
  
  
  
  
  
  
  
  
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GSE122551 The Spatio-Temporal Control of Zygotic Genome Activation RNA-Seq XB-ART-56693
  
  
  
  
  
  
  
  
  
  
  
  
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GSE124563 Transcriptome analysis of regeneration in Xenopus laevis twin embryos RNA-Seq XB-ART-56074
  
  
  
  
  
  
  
  
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GSE126058 Identification of genes regulated by Erythroferrone (ERFE) in Xenopus embryos at tadpole stages. RNA-Seq XB-ART-56559
  
  
  
  
  
  
  
  
  
  
  
  
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