Xenopus cDNA libraries

A number of cDNA libraries were used in generating the Xenopus ESTs, the majority of which are from the Xenopus Gene Collection Library.

Information on older libraries are available from the old Xenbase static site.

Xenopus tropicalis

NICHD_XGC_tropBone1	bone
NIH_XGC_tropBrn1	brain
NIH_XGC_tropBrn2	brain
NIH_XGC_tropBrn3	brain
NIH_XGC_tropBrn4	brain
Xenopus tropicalis xtbs plasmid library	central nervous system
Wellcome CRC pCS107 tropicalis egg	egg
XGC-egg	egg
NICHD_XGC_tropEye1	eye
NIH_XGC_tropFat1	fat body
XGC-tailbud-head	head
Xenopus tropicalis xthr plasmid library	head
NIH_XGC_tropHrt1	heart
NICHD_XGC_tropInt_54	intestine
NICHD_XGC_tropInt_60	intestine
NICHD_XGC_tropInt_62	intestine
NICHD_XGC_tropInt_63	intestine
NICHD_XGC_tropInt_66	intestine
NIH_XGC_tropInt1	intestine
NICHD_XGC_tropLimb_m	limb
NIH_XGC_tropLiv1	liver
NIH_XGC_tropLun1	lung
NIH_XGC_tropKid1	mesonephric kidney
NIH_XGC_tropOva1	ovary
NIH_XGC_tropOvi1	oviduct
NICHD_XGC_tropPanc1	pancreas
NIH_XGC_tropSkeMus1	skeletal muscle
NIH_XGC_tropSki1	skin
NICHD_XGC_tropSp1	spleen
NIH_XGC_tropSpl1	spleen
NIH_XGC_tropSto1	stomach
NICHD_XGC_tropTail_m	tail
NICHD_XGC_tropTe1	testis
NIH_XGC_tropTe3	testis
NIH_XGC_tropTe4	testis
NIH_XGC_tropTe5	testis
NIH_XGC_tropTe6	testis
NICHD_XGC_tropThy1	thymus
NICHD_XGC_Emb5	whole organism
NICHD_XGC_Emb6	whole organism
NICHD_XGC_Emb7	whole organism
NICHD_XGC_Emb8	whole organism
NICHD_XGC_Swb1	whole organism
NICHD_XGC_Swb1N	whole organism
NICHD_XGC_trop_25	whole organism
NIH_XGC_tropGas5	whole organism
NIH_XGC_tropGas6	whole organism
NIH_XGC_tropGas7	whole organism
NIH_XGC_tropMet10	whole organism
NIH_XGC_tropMet2	whole organism
NIH_XGC_tropMet3	whole organism
NIH_XGC_tropMet4	whole organism
NIH_XGC_tropMet5	whole organism
NIH_XGC_tropMet6	whole organism
NIH_XGC_tropMet7	whole organism
NIH_XGC_tropMet8	whole organism
NIH_XGC_tropMet9	whole organism
NIH_XGC_tropNeu5	whole organism
NIH_XGC_tropTad5	whole organism
Wellcome CRC pCS107 tropicalis St10-12	whole organism
XGC-gastrula	whole organism
XGC-neurula	whole organism
XGC-tadpole	whole organism
XGC-tailbud	whole organism
Xenopus tropicalis embryo gastrula	whole organism
XtSt10-30	whole organism

Xenopus laevis

Yamamoto/Hyodo-Miura NIBB/NBRP Xenopus DMZ pCS2p+ cDNA library	Keller explant
Wellcome CRC pSK animal cap	animal cap
NICHD_XGC_bone	bone
NICHD_XGC_Brn1	brain
NICHD_XGC_olfb	brain
Xenopus EST library	brain
Cornea-lens transdifferentiation library	cornea
Xenopus laevis AGM region stage 46-52	dorsal lateral plate region
Osada Taira anterior neuroectoderm (ANE) pCS105 cDNA library	ectoderm
Blackshear/Soares normalized Xenopus egg library	egg
RIKEN Xenopus egg	egg
Soares NXEG	egg
Wellcome CRC pSK egg	egg
Wellcome CRC pcDNAI egg	egg
Xenopus laevis unfertilized egg cDNA library	egg
Xenopus laevis ZAP Express endodermal cDNA library	endoderm
activin-induced ectoderm cDNA library	endoderm
AEM cDNA library (lambda-ZAPII)	endomesoderm
Osada Taira anterior endomesoderm (AEM) pCS105 cDNA library	endomesoderm
Shibata Xenopus AEM lambda-ZAP II cDNA library	endomesoderm
NICHD_XGC_Eye1	eye
NICHD_XGC_FaB	fat body
NICHD_XGC_FaBN	fat body
Wellcome CRC pRN3 head	head
NICHD_XGC_He1	heart
Xenopus laevis intestine adult	intestine
NICHD_XGC_limb	limb
NICHD_XGC_limb_m	limb
NICHD_XGC_Li1	liver
Xenopus adult liver ZAP Express phage library	liver
Xenopus liver tumor cDNA library	liver
Xenopus embryonic liver diverticulum plasmid library	liver diverticulum
NICHD_XGC_Lu1	lung
NICHD_XGC_Kid1	mesonephric kidney
NICHD_XGC_OO1	oocyte
Wellcome CRC pRN3 oocyte	oocyte
Xenopus laevis oocyte	oocyte
Xenopus laevis oocyte cDNA subtracted library	oocyte
Xenopus laevis oocyte non normalized	oocyte
Harland ovary	ovary
NICHD_XGC_Ov1	ovary
Xenopus laevis ovary (S.Hirohashi)	ovary
NICHD_XGC_panc	pancreas
NICHD_XGC_skin_m	skin
NICHD_XGC_Sp1	spleen
NICHD_XGC_sple_PHA	spleen
NICHD_XGC_tail_m	tail
NICHD_XGC_Te1	testis
NICHD_XGC_Te2	testis
NICHD_XGC_Te2N	testis
NICHD_XGC_thy	thymus
Xenopus laevis library (Cao Y)	unspecified
Xenopus laevis mitotic phosphoprotein cDNA	unspecified
Blumberg_Cho dorsal blastopore lip	upper blastopore lip
Wellcome CRC pRN3 dorsal lip	upper blastopore lip
32-cell stage cDNA expression library	whole organism
Cho Li treated gastrula	whole organism
Harland stage 19-23	whole organism
Harland stage 19-23 Xenopus laevis cDNA	whole organism
Kirschner embryo St10 14	whole organism
LiCl-dorsalized gastrula cDNA expression library	whole organism
NIBB Mochii normalized Xenopus early gastrula library	whole organism
NIBB Mochii normalized Xenopus neurula library	whole organism
NIBB Mochii normalized Xenopus tailbud library	whole organism
NICHD_XGC_Emb1	whole organism
NICHD_XGC_Emb10	whole organism
NICHD_XGC_Emb2	whole organism
NICHD_XGC_Emb3	whole organism
NICHD_XGC_Emb4	whole organism
NICHD_XGC_Emb9	whole organism
NICHD_XGC_Tad1	whole organism
NICHD_XGC_Tad2	whole organism
NICHD_XGC_int_m	whole organism
RT-PCR product from stage 20 RNA	whole organism
Stage 10+ Gastrula Library	whole organism
UV-ventralized gastrula cDNA expression library	whole organism
Wellcome CRC pCS2+ st19-26	whole organism
Wellcome CRC pRN3 St10 5	whole organism
Wellcome CRC pRN3 St13 17	whole organism
Wellcome CRC pRN3 St13 17 egg animal cap	whole organism
Wellcome CRC pRN3 St19 26	whole organism
Wellcome CRC pRN3 St19 26 egg animal cap	whole organism
Wellcome CRC pSK St 10 5	whole organism
Wellcome CRC pcDNAI St10 5	whole organism
Wellcome CRC pcDNAI St24-26	whole organism
Xenla 13	whole organism
Xenla 13LiCl	whole organism
Xenla_13	whole organism
Xenla_13LiCl	whole organism
Xenopus Stage 6 cDNA Expression Library	whole organism
Xenopus laevis Lambda TriplEx cDNA Express Library	whole organism
Xenopus laevis Lambda TripleEx Express Library	whole organism
Xenopus laevis gastrula non normalized	whole organism
Xenopus laevis tadpole	whole organism
Xenopus laevis tadpole stage 24	whole organism
Xenopus neurula plasmid library	whole organism
Xenopus total RNA	whole organism
cDNA from differential display on Platinum-treated embryos	whole organism
cDNA from differential display on mercury-treated embryos	whole organism
normalized Xenopus laevis gastrula	whole organism