XB-CLONE-3307521
Clone Name: IMAGE:7657305
|
Gene:
tbr1
|
Species: Xenopus tropicalis
|
|
|
Sequence:
Full length sequence: BC136086 [+]
GGAGAGTAGGGGGACTAAGTGTCAGTTGCTAGCAATGCAGGTGGATCATTGCCTCTCTTCCTCTATGATGCTCTCCAAGAAATTCCTAAGTGTCACCGGC
AGTTACCCCCATCCAGCAGCGCCTGAGCTGGCTTTGCACGACCATCCCATTATCTCCTCCGCTGACAACCTGGAGAGAAGTTCACCTCTGAAAAAAAGCG
ACTGTCAGGGGGATGACGAATCAGTCGGAGGCTGACAGTTTCTCTGGCGCTAAGGACGCACCGGGGGACGGCCAGAGGAGTAAGCTGTCTCCTGTCTTGG
ATGGGGTCTCTGAGATTCGTCACAGTTTCGATGGATCTGCAGCAGATCGTTATCTCCTCCCTCAGTCCAGTCAGTCCCAGTCTGCTGCCTCTGCTCCCAC
TACTACTATGTTCCCTTATCCCAGCCAGCATGGAGCTGCTCACCCAGCCTTCTCCCTCGGAAGCCCCGGCAGGTACATGGCGCACCACCCTGTCATCGCC
AATGGAGCTTACAACAGCCTCCTGGGCAATTCTGCCCCGCAAGGATATCCCTCCGCCGGATACCCCTACAGCCAGCAGTATGGCCATTCCTACCAGGCGG
CCCCCTTCTACCAGTTCTCTGCCACCCAGCCCGGACTGGTCCCTGGCAAAGCCCAAGTCTATCTGTGTAACAGGCCACTCTGGCTCAAGTTCCACAGGCA
CCAAACCGAAATGATCATCACCAAGCAGGGCAGGCGTATGTTCCCTTTCCTGAGTTTTAACATTTCGGGGCTGGATCCCACGGCGCATTACAATATTTTT
GTTGATGTGATTCTGGCTGATCCCAATCACTGGAGATTCCAAGGGGGCAAGTGGGTACCTTGTGGCAAAGCGGACACCAACGTTCAAGGCAATAGGGTGT
ATATGCACCCCGACTCGCCCAACACCGGGGCCCACTGGATGCGCCAGGAAATCTCTTTTGGCAAAATGAAACTTACCAACAACAAAGGGGCGTCCAATAA
CAACGGGCAGATGGTTGTGTTGCAGTCTTTACACAAGTACCAACCTAGGCTACATGTGGTGGAGGTGAATGAAGATGGCACAGAAGATACCAGCCAACCT
GGCAGGGTCCAGACCTTTACCTTCCCGGAGACCCAGTTCATTGCGGTGACAGCCTACCAGAATACCGATATCACGCAATTGAAAATTGACCACAACCCAT
TTGCCAAAGGATTTCGGGACAACTATGACACGATCTACACCGGCTGTGACCTGGACCGGCTCACCCCCTCCCCCAATGACTCCCCCCGCTCCCAGATTGT
GCCGGGGGCCCGCTACTCCATGGCCAGCACCTTCCTGCAGGACCAGTTCGTTAGTAACTACGCCAAGTCCCGTTTCCACCCCCCGGGAGCGGTGCCAGGG
CCGGGAACTGACCGCAGCGTCCCCCATACAAACGGGCTGCTGTCGCCTCAACAAGGGGAGGACCCCGGGGCCCCGTCCCCGCAACGTTGGTTTGTAACCC
CAGCCAACAACAGGCTGGACTTCACCTCCGCTTCTGCCTACGATGCGGCCACAGACTTTGCCGGCAACGCTGCCACCTTGTTGTCCTACGCTGCGGCCGG
AGTCAAGGCGCTTCCTCTGCCTGGAGGTGGCTGCACAGCCCGCCCTCTTGGTTACTATAGTGATCCCACTGGCTGGGGGGCACGGAGCCCCCCTCAGTAC
TGCACTAAGTCCGGCTCTGTGCTGCCGTGTTGGGCTACAGGGGGCAGGATGGCGGCCACTAACCCTTACCTAACAGGCAGTGAGGAGGTAGAAAGTCTGG
CAGCTACAGACAGGTCTCCTTTGGGTGAGGACACAAAACCCAAAGACCTGTCCGACTCCAGCTGGATCGAAACCCCTCCTTCCATCAAGTCTATGGACTC
CTCCGACTCCGGGATATATGAACAGGCCAAGAGAAGGAGGCTCTCACCCTCCGACCCTGCGGTGTCGGGCAGCTCCTCGCCATTAAAGAGTGAAGTGGTG
CCCCCTAGGGACTGTGAGAAAAACTGCACCAAGGACCTGAGTTATTATGGTTTCTACACTCACACTTAGGGCCACCACACAACTCCTTCATGTCCTTCAT
ACAAGGTCAGGCATCCTGAGGACAATCACTGGCCAAGCTGACATTGGTGAGACTTGAAATCACAGCACTAACGCTTTGCCCTATGGCTTTACACAGTCAT
GTGTCTCCAGGGGCAACAAGCCCCTCAGCAGCACTAACACCCAACCGTTACCCTCTGCCCGGGTCTGGCTATACTTATATCCCGACTCTCTCACCAGCTC
CATGTCTCTTCTCAGCCTGTGGATGTCTCAGCACCTCGGACAGCAATGGGATGTTTCAGCACCAAGGACAGCGCAAAGCTCCATTCCTATTCCTTTCCAT
TGGAGTCTTGTTTGCGCCTGAACCGCAATACACACAGTTTTCTCCCATGGTCTTTATCGTTCATGGTAGGGCTGCGGTCCAGACTTCTGGTAAATCTATC
AAATGACTCTACTAATGATGTTATTTTTTATTTGTCGCCTTTAAAGTCGCCAGCAGACTTTACCTACTGTTGCTGAACTACAACTTCTAGCACACCCAAG
GCGGGGTGATGGGAGTTGCAGTATAAGATCATACCTAAGTCAGAATTTATTTATAAACCAGTGGTCATTTATTTTTATTTTTTGTAATGGTTTATTAGAA
ACTAAAAATAATGTCACCCCCCCCCCCCCCATATGCGTTTGACTGATGTTAGTGTCATAAATACACGATTTATATCTAAGGGAAAATCCTCTTATTTATT
GTGCCAAATGAATGCTGTTGCCAAACTTTCTATTCAGCCTCATTTACACGGACCAGCATTTGTATGAATTCCTCGCAATCGTATGTACGAAAGAACAATC
CATTTAATAGATCCTGTTTGGGGGCGTGGGACTGCTGGCAACCTGTGGTCAAGTCCGGTGAAATCGAATTGTAAATTGTACCCTTAATGCTTTTTAGATT
AAAGGCCCATTTTCTATAACGTAAGTGTCTATGAGAGATAGTTCCCCTGTGTTTTCTATGTTTTTATTTTTGTCTCGACACATCCCGAAAATTGGTCCTG
TAGGAGACCCGTACAACTTGTTTTCGATTTTATTTCTTGTCATATAAACCAAGAATGTACAGACCTGTACACAATCTAAATTAAATACCAGACGATCCCT
GTAAAAAAAAAAAAAAA
5' EST: CX829223 [+]gagagtagggggactaagtgtcagttgctagcaatgcaggtggatcattgcctctcttcctctatgatgctctccaagaaattcctaagtgtcaccggca
gttacccccatccagcagcgcctgagctggctttgcacgaccatcccattatctcctccgctgacaacctggagagaagttcacctctgaaaaaaagcga
ctgtcagggggatgacgaatcagtcggaggctgacagtttctctggcgctaaggacgcaccgggggacggccagaggagtaagctgtctcctgtcttgga
tggggtctctgagattcgtcacagtttcgatggatctgcagcagatcgttatctcctccctcagtccagtcagtcccagtctgctgcctctgctcccact
actactatgttcccttatcccagccagcatggagctgctcacccagccttctccctcggaagccccggcaggtacatggcgcaccaccctgtcatcgcca
atggagcttacaacagcctcctgggcaattctgccccgcaaggatatccctccgccggatacccctacagccagcagtatggccattcctaccaggcggc
ccccttctaccagttctctgccacccagcccggactggtccctggcaaagcccaagtctatctgtgtaacaggccactctggctcaagttccacaggcac
caaaccgaaatgatcatcaccaagcagggcaggcgtatgttccctttcctgagttttaacatttcggggctggatcccacggcgcattacaatatttttg
ttgatgtgattctggctgatcccaatcactggagattccagggggcaagtgggta
3' EST: CX829222 [+]tttttttttttttttacagggatcgtctggtatttaatttagattgtgtacaggtctgtacattcttggtttatatgacaagaaataaaatcgaaaacaa
gttgtacgggtctcctacaggaccaattttcgggatgtgtcgagacaaaaataaaaacatagaaaacacaggggaactatctctcatagacacttacgtt
atagaaaatgggcctttaatctaaaaagcattaagggtacaatttacaattcgatttcaccggacttgaccacaggttgccagcagtcccacgcccccaa
acaggatctattaaatggattgttctttcgtacatacgattgcgaggaattcatacaaatgctggtccgtgtaaatgaggctgaatagaaagtttggcaa
cagcattcatttggcacaataaataagaggattttcccttagatataaatcgtgtatttatgacactaacatcagtcaaacgcatatggggggggggggg
gtgacattatttttagtttctaataaaccattacaaaaaataaaaataaatgaccactggtttataaataaattctgacttaggtatgatcttatactgc
aactcccatcaccccgccttgggtgtgctagaagttgtagttcagcaacagtaggtaaagtctgctggcgactttaaaggcgacaaataaaaaataacat
ccttagtagagtcatttgatagatttac
Library:
Description: PolyA+ RNA was primed with oligo-dT primer 5'-GACTAGTTCTAGATCGCGAG CGGCCGCCCTTTTTTTTTTTTTTT-3'. cDNA was ligated to SalI adapter (5'-TCGACCCACGCGTCCG-3' and 5'-CGGACGCGTGGG-3'), digested with NotI, size fractionated in 1.1% agarose gel electrophoresis and ligated into SalI and NotI digested pCMV-SPORT6 vector. Library contains the 1.5-2 kb size fraction (additional size fractions contained in the NIH_XGC_tropBrn2 and Brn4 libraries). Library constructed at the DOE Joint Genome Institute.Anatomy: brain | Stage: frog |
Normalized: No | Subtraction: No |
Vector Details | Vector Map |
Name: pCMV-SPORT6
Type: phagemid
5' Restriction Site: SalI
3' Restriction Site: NotI | |
Usage:
Suppliers: