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XB-ART-51424
Dev Dyn. January 1, 2016; 245 (1): 34-46.

lin28 proteins promote expression of 17∼92 family miRNAs during amphibian development.

Warrander F , Faas L , Kovalevskiy O , Peters D , Coles M , Antson AA , Genever P , Isaacs HV .


Abstract
Lin28 proteins are post-transcriptional regulators of gene expression with multiple roles in development and the regulation of pluripotency in stem cells. Much attention has focussed on Lin28 proteins as negative regulators of let-7 miRNA biogenesis; a function that is conserved in several animal groups and in multiple processes. However, there is increasing evidence that Lin28 proteins have additional roles, distinct from regulation of let-7 abundance. We have previously demonstrated that lin28 proteins have functions associated with the regulation of early cell lineage specification in Xenopus embryos, independent of a lin28/let-7 regulatory axis. However, the nature of lin28 targets in Xenopus development remains obscure. Here, we show that mir-17∼92 and mir-106∼363 cluster miRNAs are down-regulated in response to lin28 knockdown, and RNAs from these clusters are co-expressed with lin28 genes during germ layer specification. Mature miRNAs derived from pre-mir-363 are most sensitive to lin28 inhibition. We demonstrate that lin28a binds to the terminal loop of pre-mir-363 with an affinity similar to that of let-7, and that this high affinity interaction requires to conserved a GGAG motif. Our data suggest a novel function for amphibian lin28 proteins as positive regulators of mir-17∼92 family miRNAs.

PubMed ID: 26447465
PMC ID: PMC4982076
Article link: Dev Dyn.
Grant support: BB/H000925/1 Biotechnology and Biological Sciences Research Council , 098230 Wellcome Trust , 098230 Wellcome Trust , BB/H000925/1 Biotechnology and Biological Sciences Research Council , BB/D527026/1 Biotechnology and Biological Sciences Research Council , 098230 Wellcome Trust , BB/H000925/1 Biotechnology and Biological Sciences Research Council , BB/D527026/1 Biotechnology and Biological Sciences Research Council , BB_BB/H000925/1 Biotechnology and Biological Sciences Research Council , WT098230 Wellcome Trust , BB/D527026/1 Biotechnology and Biological Sciences Research Council , 098230 Wellcome Trust , BB/H000925/1 Biotechnology and Biological Sciences Research Council , BB/D527026/1 Biotechnology and Biological Sciences Research Council

Genes referenced: lin28a lin28b


References:
Branney, 2009, Pubmed, Xenbase[+]


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