XB-ART-53591Elife. September 25, 2017; 6
Insights into electrosensory organ development, physiology and evolution from a lateral line-enriched transcriptome.
The anamniote lateral line system, comprising mechanosensory neuromasts and electrosensory ampullary organs, is a useful model for investigating the developmental and evolutionary diversification of different organs and cell types. Zebrafish neuromast development is increasingly well understood, but neither zebrafish nor Xenopus is electroreceptive and our molecular understanding of ampullary organ development is rudimentary. We have used RNA-seq to generate a lateral line-enriched gene-set from late-larval paddlefish (Polyodon spathula). Validation of a subset reveals expression in developing ampullary organs of transcription factor genes critical for hair cell development, and genes essential for glutamate release at hair cell ribbon synapses, suggesting close developmental, physiological and evolutionary links between non-teleost electroreceptors and hair cells. We identify an ampullary organ-specific proneural transcription factor, and candidates for the voltage-sensing L-type Cav channel and rectifying Kv channel predicted from skate (cartilaginous fish) ampullary organ electrophysiology. Overall, our results illuminate ampullary organ development, physiology and evolution.
PubMed ID: 28346141
PMC ID: PMC5429088
Article link: Elife.
Genes referenced: atoh1 cacna1d cacnb2 cav1 ctbp2 kcna5 kcnab3 lhx3 myt1 neurod4 pou4f1 pou4f3 pvalb.1 sox1 sox2
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|Figure 1. Pie chart showing the results of a PANTHER classification analysis by molecular function of 332 transcripts from the paddlefish lateral line-enriched dataset with associated gene ontology (GO) terms.The percentage of function hits is indicated in parentheses. Binding activities GO:0005488 (blue) represent ~39% of the function hits (16% nucleic acid binding GO:0003637; 17% protein binding GO:0005515; 6% other binding, including calcium and lipid binding). Catalytic activities GO:0003824 (green) account for ~35% of the function hits (4% enzyme regulator activity GO:0030234; 9% transferase; and 11% each hydrolase and other catalytic activities). Transmembrane-associated activities (orange) represent ~19% of function hits (13% transporter GO:0005215; 6% receptor GO:0004872). The remaining ~7% of function hits are comprised of signal transducer GO:0004871, structural molecule GO:0005198 and antioxidant GO:0016209 activities.DOI: http://dx.doi.org/10.7554/eLife.24197.002|
|Figure 2. Both ampullary organs and neuromasts express transcription factor genes essential for hair cell development, and selected putative Atoh1 targets.(A–D) In situ hybridization for paddlefish Atoh1 at stages 33, 37, 39 and 46, respectively. (E–H) Sox2 immunostaining at stages 34, 37, 41 and 46, respectively. (I,J) Higher-power views of stage 46 skin-mounts of Atoh1 (I) and Sox2 (J). Dotted lines indicate approximate boundaries of neuromast containing lateral line canal lines. (K,L) In situ hybridization for Pou4f3 at stage 46 reveals expression in both ampullary organs and neuromasts. (M,N) In situ hybridization for Sox1 at stage 39 shows expression in the posterior lateral line primordium (pllp) and ampullary organs erupting on the operculum. (O,P) At later stages, Sox1 is maintained in ampullary organs and expressed in neuromast canal lines, as shown here at stage 45. Abbreviations: ao, ampullary organ; e, eye; nm, neuromast; ov, otic vesicle, pllp, posterior lateral line primordium. Scale bars: A-H,K,M-O, 200 µm; I,J,L,P, 100 µm.DOI: http://dx.doi.org/10.7554/eLife.24197.003|
|Figure 3. The proneural transcription factor gene Neurod4 is expressed in ampullary organs but not neuromasts.(A–F) In situ hybridization for Neurod4 at stages 29 (A), 39 (B), 41 (C) 43 (D) and 46 (E). At the earliest stages, transcripts are observed in the olfactory epithelium, eye, trigeminal ganglion. By stage 39 transcripts are observed in the developing ampullary organ fields of the operculum, rapidly expanding to other ampullary organ fields in older embryos. Expression is limited to ampullary organs and is not observed at any stage in neuromasts, as clearly seen at higher power at stage 46 (F). Dotted lines indicate approximate boundaries of neuromast canal lines. (G–I) Potential Neurod4 interactors Pou4f1 (G), Lhx3 (H) and Myt1 (I) are expressed in both ampullary organs and neuromasts. Abbreviations: ao, ampullary organ; e, eye; nm, neuromast; olf, olfactory epithelium; ov, otic vesicle; tg, trigeminal ganglion. Scale bars: A-F, 200 µm; G-I, 100 µm.DOI: http://dx.doi.org/10.7554/eLife.24197.004|
|Figure 4. Ampullary organs express genes required for transmission at the hair cell ribbon synapse.In situ hybridization at stage 46 reveals expression in both ampullary organs and neuromasts of: (A) Slc17a8, encoding the vesicular glutamate transporter 3 (Vglut3); (B) Otof, encoding otoferlin; (C) Cacna1d, encoding the pore-forming alpha subunit of Cav1.3; (D) Cacnb2, encoding an auxiliary beta subunit that is associated with Cav1.3 in hair cells - note that the level of Cacnb2 in neuromasts is weaker than in ampullary organs; (E) Rims2, associated with synaptic ribbons in photoreceptors and hair cells; (F) the Ribeye-specific A domain of Ctbp2, encoding the ribbon-specific protein Ribeye. Scale bars: 100 µm and 20 µm.DOI: http://dx.doi.org/10.7554/eLife.24197.005|