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Xenbase Release Notes

Xenbase Release Notes

Release 2.2

  • Gene pages are being populated with archetypal image(s) of gene expression patterns
  • New Expression tab on Gene pages
    • in situ images from XDB3 (presence of images is indicated by an icon on the Expression tab). Axeldb and community submitted images available soon.
    • Anatomy terms and stages (expression data derived from EST/cDNA library representation). This is available for most genes even when they lack images.
  • UniProt Knowledgebase links (alternative splicing information, protein domains and much more)
  • Microarray data from GEO - view array data where the gene of interest displays differential expression
  • Affymetrix probe sets for both trop and laevis
  • Gene search
    • Select number of results per page
  • Literature section
    • Publications with figures are flagged with a small icon. Load the paper to see the abstract, figures and legends, or click on the icon to see only the figures and legends.

Release 2.1

  • Dramatically faster gene search and gene pages
  • Literature tab added to gene page
  • In-line links from article abstracts, titles and image captions to gene pages
  • Improved gene search
    • Now search shows how results were found
    • New search by gene function

Release 2.01

  • Addition of 7,600 + Metazome-curated gene models.