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Summary Attributions Wiki
XB-MORPHOLINO-17249130

Morpholino Name: ahnak MO1
Synonyms: TNeu103f06, Xtnovel34
mRNA Target: ahnak

Morpholino Type: Splice Blocking()
Sequence:
5' TTCTTCTTCTTCTTTATCCATCTTG 3'

Source: Gene Tools LLC


mRNA Target tropicalis laevis.L laevis.S
Identities 24/25
genomic

MO
5' CTAGATGGATAAAGAAGAAGAAGAA 3' | ||||||||||||||||||||||| 3' GTTCTACCTATTTCTTCTTCTTCTT 5'
Genomic Alignments Position Identity Strand Target mRNA
laevis 7.1 Scaffold31469:1649281..1649305 24/25 unknown
Scaffold36134:109854..109878 23/25 unknown
Scaffold102262:2009712..2009736 22/25 Antisense off-target elp3.L
Scaffold102974:18976745..18976769 22/25 unknown
Scaffold143831:5319966..5319990 22/25 unknown
Scaffold151567:282072..282096 22/25 unknown
Scaffold195950:1700400..1700424 22/25 unknown
Scaffold218195:2441706..2441730 22/25 Antisense off-target Xelaev16028160m
Scaffold243:2994597..2994621 22/25 Sense off-target Xelaev16032318m
Scaffold2589:672645..672669 22/25 Antisense off-target Xelaev16034930m
Scaffold27891:1677024..1677048 22/25 Antisense off-target Xelaev16038231m
Scaffold36364:2546195..2546219 22/25 unknown
Scaffold382321:280..304 22/25 unknown
Scaffold44780:2451192..2451216 22/25 Antisense off-target Xelaev16054973m
Scaffold67052:9707..9731 22/25 unknown
Scaffold76530:561792..561816 22/25 Sense off-target ephb3.L
Scaffold78860:8173690..8173714 22/25 Sense off-target Xelaev16073481m
Scaffold82136:135591..135615 22/25 unknown
Scaffold9994:8158276..8158300 22/25 unknown
Scaffold104389:3..27 21/25 unknown
Scaffold11063:442079..442103 21/25 unknown
Scaffold11199:3250988..3251012 21/25 unknown
Scaffold11316:2297112..2297136 21/25 unknown
Scaffold1168:6997879..6997903 21/25 unknown
Scaffold120511:997510..997534 21/25 unknown
Scaffold120942:368000..368024 21/25 Antisense off-target Xelaev16005942m
Scaffold12462:1569569..1569593 21/25 Antisense off-target Xelaev16006708m
Scaffold12518:2270028..2270052 21/25 unknown
Scaffold126688:49..73 21/25 unknown
Scaffold129356:46..70 21/25 unknown
Scaffold134683:328973..328997 21/25 Sense off-target Xelaev16010059m
Scaffold13471:3593908..3593932 21/25 unknown
Scaffold134783:147..171 21/25 unknown
Scaffold135348:786786..786810 21/25 Sense off-target Xelaev16010565m
Scaffold137317:2201336..2201360 21/25 unknown
Scaffold150991:2923347..2923371 21/25 Sense off-target Xelaev16014962m
Scaffold158246:59..83 21/25 unknown
Scaffold163806:8023493..8023517 21/25 unknown
Scaffold167265:1760693..1760717 21/25 unknown
Scaffold167800:786131..786155 21/25 unknown
Scaffold169907:3796182..3796206 21/25 unknown
Scaffold179179:2522..2546 21/25 unknown
Scaffold18239:211549..211573 21/25 unknown
Scaffold188120:1819926..1819950 21/25 unknown
Scaffold197913:487061..487085 21/25 Antisense off-target sez6l2.S
Scaffold20641:993881..993905 21/25 unknown
Scaffold207208:699034..699058 21/25 Antisense off-target Xelaev16026748m
Scaffold218947:16..40 21/25 unknown
Scaffold22127:811391..811415 21/25 unknown
Scaffold226:953692..953716 21/25 Sense off-target Xelaev16029426m
Scaffold230550:1212065..1212089 21/25 unknown
Scaffold237412:1883419..1883443 21/25 unknown
Scaffold26819:1763072..1763096 21/25 unknown
Scaffold27036:2973553..2973577 21/25 unknown
Scaffold275250:113..137 21/25 unknown
Scaffold28181:807820..807844 21/25 unknown
Scaffold29017:723760..723784 21/25 unknown
Scaffold291413:129..153 21/25 unknown
Scaffold298574:1681304..1681328 21/25 Sense off-target Xelaev16040023m
Scaffold302805:471776..471800 21/25 Sense off-target Xelaev16040695m
Scaffold30711:1312057..1312081 21/25 unknown
Scaffold32212:5620159..5620183 21/25 unknown
Scaffold3467:2383610..2383634 21/25 unknown
Scaffold347078:295016..295040 21/25 unknown
Scaffold3490:242249..242273 21/25 unknown
Scaffold35361:4180861..4180885 21/25 Antisense off-target Xelaev16046412m
Scaffold36295:363210..363234 21/25 unknown
Scaffold3881:981395..981419 21/25 unknown
Scaffold43483:3052886..3052910 21/25 Antisense off-target Xelaev16053826m
Scaffold45174:489425..489449 21/25 unknown
Scaffold45834:168974..168998 21/25 unknown
Scaffold50694:2886399..2886423 21/25 unknown
Scaffold51452:2841765..2841789 21/25 unknown
Scaffold51988:4606758..4606782 21/25 unknown
Scaffold52170:602673..602697 21/25 unknown
Scaffold52573:6952116..6952140 21/25 Sense off-target pfkp.S
Scaffold53263:3302649..3302673 21/25 Sense off-target dio1.L
Scaffold61741:1654086..1654110 21/25 unknown
Scaffold62355:563655..563679 21/25 unknown
Scaffold62623:89..113 21/25 unknown
Scaffold71264:1910742..1910766 21/25 unknown
Scaffold74352:578371..578395 21/25 unknown
Scaffold75417:1375185..1375209 21/25 unknown
Scaffold7940:153885..153909 21/25 unknown
Scaffold8129:4396063..4396087 21/25 Sense off-target lcp1.S
Scaffold81941:831766..831790 21/25 Sense off-target Xelaev16074923m
Scaffold82029:63..87 21/25 unknown
Scaffold85380:1521987..1522011 21/25 Sense off-target Xelaev16076057m
Scaffold86352:53209..53233 21/25 Sense off-target Xelaev16076504m
Scaffold89475:2941407..2941431 21/25 unknown
Scaffold90072:805396..805420 21/25 Sense off-target atp6ap2.S
Scaffold9266:8875516..8875540 21/25 Antisense off-target mfge8.L
Scaffold93416:404920..404944 21/25 unknown
Scaffold93786:3593546..3593570 21/25 Antisense off-target ctr9.S
tropicalis 7.1 scaffold_1:19875628..19875652 24/25 unknown
scaffold_65:264368..264392 24/25 Antisense target ahnak
scaffold_1:95258036..95258060 22/25 Antisense off-target smc5
scaffold_164:195634..195658 22/25 unknown
scaffold_2:97450720..97450744 22/25 Antisense off-target myo16
scaffold_6:31650478..31650502 22/25 unknown
scaffold_7:57604933..57604957 22/25 unknown
scaffold_1:159059250..159059274 21/25 Antisense off-target spata5
scaffold_1:17168116..17168140 21/25 Sense off-target iqgap2
scaffold_1:38671469..38671493 21/25 unknown
scaffold_10:2078124..2078148 21/25 unknown
scaffold_10:32280910..32280934 21/25 unknown
scaffold_2:106560452..106560476 21/25 Antisense off-target lnx2
scaffold_2:115487135..115487159 21/25 Sense off-target loc642132
scaffold_2:59453618..59453642 21/25 unknown
scaffold_2:87051023..87051047 21/25 unknown
scaffold_24:275957..275981 21/25 unknown
scaffold_24:276244..276268 21/25 unknown
scaffold_31:262196..262220 21/25 unknown
scaffold_4:120138581..120138605 21/25 unknown
scaffold_4:132913492..132913516 21/25 Sense off-target magi1
scaffold_4:4990903..4990927 21/25 unknown
scaffold_4:5189886..5189910 21/25 unknown
scaffold_4:71783822..71783846 21/25 unknown
scaffold_5:49720500..49720524 21/25 unknown
scaffold_6:10911987..10912011 21/25 unknown
scaffold_6:140510169..140510193 21/25 Antisense off-target cry-dash
scaffold_7:18067767..18067791 21/25 Sense off-target LOC100486640
scaffold_7:76544515..76544539 21/25 unknown
scaffold_8:14517623..14517647 21/25 unknown
scaffold_8:55691113..55691137 21/25 Antisense off-target adad2
scaffold_875:7509..7533 21/25 Sense off-target slco1b3
scaffold_875:7695..7719 21/25 Sense off-target slco1b3
scaffold_9:23847653..23847677 21/25 Antisense off-target trpm2
scaffold_9:36930912..36930936 21/25 Sense off-target gk5
scaffold_9:6052829..6052853 21/25 unknown
scaffold_9:71208549..71208573 21/25 unknown
scaffold_9:98076507..98076531 21/25 unknown
Publications
First: Defining synphenotype groups in Xenopus tropicalis by use of antisense morpholino oligonucleotides. [PLoS Genet 2006]
Most recent:
View All Papers



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