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Summary Attributions Wiki
XB-MORPHOLINO-17249265
Morpholino Name: cdh11 MO1
Synonyms: Xcad-11-MO, Xcad-11MO, xcad-11 MO
Target mRNA: cdh11

Morpholino Type: uncategorized morpholino
Sequence: 5' CTTTCTTCATTTTTGGTAGTGTGT 3'

Source: Gene Tools LLC


Target mRNA tropicalis laevis.L laevis.S
Identities 22/24 21/24 22/24
genome
MO
 
5' CAACACTACCAAAAATGAAGAAAG 3'
     ||||||||||||||||||||||
3' TGTGTGATGGTTTTTACTTCTTTC 5'
 
5' CACCACTACCAAAAATGAAGAAAG 3'
      |||||||||||||||||||||
3' TGTGTGATGGTTTTTACTTCTTTC 5'
 
5' CAACACTACCAAAAATGAAGAAAG 3'
     ||||||||||||||||||||||
3' TGTGTGATGGTTTTTACTTCTTTC 5'
    
Genomic Alignments Position Identity Strand Target Target mRNA
laevis 10.1 Chr4S:38407592..38407615 22/24 Antisense target cdh11.S
Chr4L:49593661..49593684 21/24 Antisense target cdh11.L
Chr5S:3881943..3881966 21/24 Antisense off-target LOC108717374
Chr5L:18020511..18020534 20/24 Antisense off-target mixer.L
Chr5S:77912454..77912477 20/24 Antisense off-target tmem30a.S
Chr9_10L:46203104..46203127 20/24 Sense off-target cacna1g.L
Chr4L:2543782..2543805 20/24 Sense off-target zdhhc13.L
Chr8L:67178313..67178336 20/24 Antisense off-target LOC121396837
Chr1L:97026538..97026561 20/24 Antisense off-target LOC108711800
Chr1L:97029269..97029292 20/24 Sense off-target LOC108711800
Chr4S:51931546..51931569 20/24 unknown
Chr4S:59265462..59265485 20/24 unknown
Chr5S:52654705..52654728 20/24 unknown
Chr6L:98615094..98615117 20/24 unknown
Chr7L:18653406..18653429 20/24 unknown
Chr1S:160285206..160285229 20/24 unknown
Chr1S:40645923..40645946 20/24 unknown
Chr2L:67047698..67047721 20/24 unknown
tropicalis 10.0 Chr4:56818564..56818587 22/24 Antisense target cdh11
Chr3:33161196..33161219 21/24 Sense off-target slit3
Chr7:74800126..74800149 21/24 Sense off-target slc37a2
Chr5:83721349..83721372 20/24 Sense off-target fut9
Chr6:23189441..23189464 20/24 Sense off-target zeb1
Chr9:52334557..52334580 20/24 Sense off-target nop58
Chr1:53858496..53858519 20/24 Sense off-target gucy1b1
Chr1:80621127..80621150 21/24 unknown
Chr10:52380230..52380253 20/24 unknown
Chr2:36122751..36122774 20/24 unknown
Chr4:63844314..63844337 20/24 unknown
Publications
???morpholino.displaySummary.papersFirst??? Cadherin-11 regulates protrusive activity in Xenopus cranial neural crest cells upstream of Trio and the small GTPases., Genes Dev 2009          
???morpholino.displaySummary.papersRecent??? The Rho guanine nucleotide exchange factor Trio is required for neural crest cell migration and interacts with Dishevelled., Development 2020                                    
???morpholino.displaySummary.papersAll???