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Summary Attributions Wiki
XB-MORPHOLINO-17249535
Morpholino Name: foxc1 MO1
Synonyms: FoxC1
Target mRNA: foxc1

Morpholino Type: uncategorized morpholino
Sequence: 5' CGCGCCTGCATGGCTCCTCCGCCTC 3'

Source: Gene Tools LLC


Target mRNA tropicalis laevis.L laevis.S
Identities 25/25 25/25 25/25
genome
MO
 
5' GAGGCGGAGGAGCCATGCAGGCGCG 3'
   |||||||||||||||||||||||||
3' CTCCGCCTCCTCGGTACGTCCGCGC 5'
 
5' GAGGCGGAGGAGCCATGCAGGCGCG 3'
   |||||||||||||||||||||||||
3' CTCCGCCTCCTCGGTACGTCCGCGC 5'
 
5' GAGGCGGAGGAGCCATGCAGGCGCG 3'
   |||||||||||||||||||||||||
3' CTCCGCCTCCTCGGTACGTCCGCGC 5'
    
Genomic Alignments Position Identity Strand Target Target mRNA
laevis 10.1 Chr6S:72930428..72930452 25/25 Antisense target foxc1.S
Chr6L:91290483..91290507 25/25 Antisense target foxc1.L
Chr4S:71608865..71608889 24/25 Antisense off-target eri3.S
Chr2S:94549414..94549438 23/25 Sense off-target cblb.S
Chr2S:94549860..94549884 23/25 Antisense off-target cblb.S
Chr9_10L:61395345..61395369 23/25 Sense off-target ccnt2.L
Chr6S:120569617..120569641 23/25 Antisense off-target nudcd1.S
Chr2L:8464810..8464834 23/25 Antisense off-target LOC108707398
Chr1L:98798172..98798196 22/25 Sense off-target noa1.L
Chr9_10L:61394868..61394892 22/25 Antisense off-target ccnt2.L
Chr1S:101464005..101464029 22/25 Sense off-target fcho1.S
Chr3S:12504300..12504324 22/25 Sense off-target lonrf1.S
Chr3S:12504952..12504976 22/25 Antisense off-target lonrf1.S
Chr2S:107717395..107717419 22/25 Antisense off-target arhgef7.S
Chr6L:73984872..73984896 22/25 Antisense off-target marchf6.L
Chr4L:33477893..33477917 21/25 Antisense off-target fto.L
Chr5L:81110647..81110671 21/25 Antisense off-target fig4.L
Chr1L:165560222..165560246 21/25 Antisense off-target smpd4.L
Chr1L:165560720..165560744 21/25 Sense off-target smpd4.L
Chr1S:175394155..175394179 21/25 Antisense off-target mast4.S
Chr2L:67657898..67657922 21/25 Antisense off-target dcaf6.L
Chr1L:15535092..15535116 21/25 Antisense off-target ctnna2.L
Chr6L:68152842..68152866 21/25 Sense off-target herpud2.L
Chr2L:47829517..47829541 21/25 Sense off-target LOC108708033
Chr2L:8465617..8465641 21/25 Sense off-target LOC108707398
Chr7L:64464035..64464059 23/25 unknown
Chr5S:138615172..138615196 23/25 unknown
Chr7L:64464678..64464702 22/25 unknown
Chr9_10L:78284631..78284655 22/25 unknown
Chr2L:92999225..92999249 22/25 unknown
Chr2S:162236279..162236303 22/25 unknown
Chr3S:110796294..110796318 22/25 unknown
Chr3S:18824243..18824267 22/25 unknown
Chr5S:138615534..138615558 22/25 unknown
Chr6S:1510985..1511009 22/25 unknown
Chr6S:25676377..25676401 22/25 unknown
Chr7L:59807296..59807320 21/25 unknown
Chr7L:82471489..82471513 21/25 unknown
Chr7S:69227701..69227725 21/25 unknown
Chr7S:69267276..69267300 21/25 unknown
Chr1L:159621524..159621548 21/25 unknown
Chr1L:159622172..159622196 21/25 unknown
Chr2L:7005795..7005819 21/25 unknown
Chr2L:7057627..7057651 21/25 unknown
Chr2L:92999645..92999669 21/25 unknown
Chr2S:162235839..162235863 21/25 unknown
Chr4L:65678322..65678346 21/25 unknown
Chr5S:138987033..138987057 21/25 unknown
Chr6S:55611966..55611990 21/25 unknown
tropicalis 10.0 Chr6:86660172..86660196 25/25 Antisense target foxc1
Chr8:93197291..93197315 21/25 Sense off-target rps29
Publications
???morpholino.displaySummary.papersFirst??? The role of FoxC1 in early Xenopus development., Dev Dyn 2007          
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