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XB-MORPHOLINO-17249726
Morpholino Name:
hoxb4 MO1
Synonyms: XHoxb4, anti-Hoxb4
Target mRNA: hoxb4
Morpholino Type: uncategorized morpholino
Sequence: 5' TGATCAAAAACGAACTCATTCTCAT 3'
Source: Gene Tools LLC
Synonyms: XHoxb4, anti-Hoxb4
Target mRNA: hoxb4
Morpholino Type: uncategorized morpholino
Sequence: 5' TGATCAAAAACGAACTCATTCTCAT 3'
Source: Gene Tools LLC
| Target mRNA | tropicalis | laevis.L | laevis.S | ||
| Identities | 25/25 | 25/25 | 25/25 | ||
| genomic MO |
5' ATGAGAATGAGTTCGTTTTTGATCA 3' ||||||||||||||||||||||||| 3' TACTCTTACTCAAGCAAAAACTAGT 5' | 5' ATGAGAATGAGTTCGTTTTTGATCA 3' ||||||||||||||||||||||||| 3' TACTCTTACTCAAGCAAAAACTAGT 5' | 5' ATGAGAATGAGTTCGTTTTTGATCA 3' ||||||||||||||||||||||||| 3' TACTCTTACTCAAGCAAAAACTAGT 5' | ||
Genomic Alignments  |
Position | Identity | Strand | Target | mRNA |
| laevis 9.2 | chr9_10L:3498953..3498977 | 25/25 | Antisense | target | hoxb4.L |
| chr9_10S:3133004..3133028 | 25/25 | Antisense | target | hoxb4.S | |
| chr9_10S:3133004..3133028 | 25/25 | Sense | off-target | LOC108702522 | |
| chr9_10L:3498953..3498977 | 25/25 | Antisense | off-target | hoxb3.L | |
| chr9_10S:3133004..3133028 | 25/25 | Antisense | off-target | LOC108702521 | |
| chr6L:33433248..33433272 | 21/25 | Sense | off-target | scin.L | |
| chr6L:39617381..39617405 | 21/25 | Antisense | off-target | hoxa3.L | |
| chr6L:39617381..39617405 | 21/25 | Antisense | off-target | LOC108718897 [provisional:hoxa4] | |
| chr6S:33722458..33722482 | 21/25 | Antisense | off-target | hoxa3.S | |
| chr6S:33722458..33722482 | 21/25 | Antisense | off-target | LOC108719683 [provisional:hoxa4] | |
| Scaffold78166:53..77 | 21/25 | unknown | |||
| chr3L:41308351..41308375 | 21/25 | unknown | |||
| tropicalis 10.0 | Chr10:12049598..12049622 | 25/25 | Antisense | target | hoxb4 |
| Chr10:12049598..12049622 | 25/25 | Antisense | off-target | hoxb3 | |
| Chr4:27381448..27381472 | 21/25 | Sense | off-target | LOC100485197 | |
| Chr6:42174199..42174223 | 21/25 | Antisense | off-target | hoxa3 | |
| Chr6:42174199..42174223 | 21/25 | Antisense | off-target | hoxa4 | |
| Publications | |||||
| First: |
Flamingo, a cadherin-type receptor involved in the Drosophila planar polarity pathway, can block signaling via the canonical wnt pathway in Xenopus laevis., Int J Dev Biol 2003  |
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| Most recent: |
FLASH, a component of the FAS-CAPSASE8 apoptotic pathway, is directly regulated by Hoxb4 in the notochord., Dev Biol 2004  |
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| View All Papers | |||||
