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XB-MORPHOLINO-17250202
Morpholino Name:
rarg MO2
Synonyms: Rargamma2
Target mRNA: rarg
Morpholino Type: uncategorized morpholino
Sequence: 5' TTCCATGCAGTCATACATTTTGGG 3'
Source: Gene Tools LLC
Synonyms: Rargamma2
Target mRNA: rarg
Morpholino Type: uncategorized morpholino
Sequence: 5' TTCCATGCAGTCATACATTTTGGG 3'
Source: Gene Tools LLC
| Target mRNA | tropicalis | laevis.L | laevis.S | ||
| Identities | 21/24 | 24/24 | 23/24 | ||
| genomic MO |
5' GCCAACATGTACGACTGCATGGAA 3' |||| ||||| |||||||||||| 3' GGGTTTTACATACTGACGTACCTT 5' | 5' CCCAAAATGTATGACTGCATGGAA 3' |||||||||||||||||||||||| 3' GGGTTTTACATACTGACGTACCTT 5' | 5' CCCAAAATGTACGACTGCATGGAA 3' ||||||||||| |||||||||||| 3' GGGTTTTACATACTGACGTACCTT 5' | ||
Genomic Alignments  |
Position | Identity | Strand | Target | mRNA |
| laevis 9.2 | chr2L:149564119..149564142 | 24/24 | Antisense | target | rarg.L |
| chr2S:129984573..129984596 | 23/24 | Antisense | target | rarg.S | |
| chr2L:149564119..149564142 | 24/24 | Antisense | off-target | LOC108708649 [provisional:rarg] | |
| chr2S:129984573..129984596 | 23/24 | Sense | off-target | Xelaev18016063m | |
| chr2S:87057388..87057411 | 21/24 | Antisense | off-target | nf1.S | |
| chr9_10L:79214501..79214524 | 21/24 | Sense | off-target | bmpr2.L | |
| chr1S:139048296..139048319 | 20/24 | Antisense | off-target | aifm3.S | |
| chr3L:97351580..97351603 | 20/24 | Antisense | off-target | tp53bp1.L | |
| chr4L:41302704..41302727 | 20/24 | Sense | off-target | LOC108713498 [provisional:nlrc5] | |
| chr4L:41302704..41302727 | 20/24 | Sense | off-target | nlrc5.L | |
| chr7L:77688248..77688271 | 20/24 | Sense | off-target | dixdc1.L | |
| chr6L:96377749..96377772 | 21/24 | unknown | |||
| chr1L:108830154..108830177 | 20/24 | unknown | |||
| chr1L:92747812..92747835 | 20/24 | unknown | |||
| chr5S:68834935..68834958 | 20/24 | unknown | |||
| chr6S:50777104..50777127 | 20/24 | unknown | |||
| chr8L:67723777..67723800 | 20/24 | unknown | |||
| tropicalis 10.0 | Chr2:147345420..147345443 | 21/24 | Antisense | target | rarg |
| Chr3:118133192..118133215 | 22/24 | Sense | off-target | adamts7 | |
| Chr7:60240440..60240463 | 21/24 | Antisense | off-target | ftsj3 | |
| Chr2:128785707..128785730 | 20/24 | Antisense | off-target | pcdh9 | |
| Chr1:182470804..182470827 | 20/24 | Sense | off-target | LOC116406436 | |
| Chr1:183815491..183815514 | 21/24 | unknown | |||
| Chr3:88516699..88516722 | 20/24 | unknown | |||
| Chr9:55016231..55016254 | 20/24 | unknown | |||
| Publications | |||||
| First: |
ERF and ETV3L are retinoic acid-inducible repressors required for primary neurogenesis., Development 2013  |
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| Most recent: |
RARβ2 is required for vertebrate somitogenesis., Development 2017  |
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| View All Papers | |||||
